RNA–Protein interactions for RNA: ENST00000554196.1

LINC00520-202, long intergenic non-protein coding RNA 520, humanhuman

TSL 3 BASIC

Gene LINC00520, Length 514 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00520-202ENST00000554196 SOS2Q07890 1332 aaPredicted RBP11.89□□□□□ -0.51
LINC00520-202ENST00000554196 CAPN15O75808 1086 aa11.89□□□□□ -0.51
LINC00520-202ENST00000554196 XPCQ01831 940 aaPredicted RBP11.89□□□□□ -0.51
LINC00520-202ENST00000554196 LMOD2Q6P5Q4 547 aa11.89□□□□□ -0.51
LINC00520-202ENST00000554196 AEBP1Q8IUX7 1158 aa11.89□□□□□ -0.51
LINC00520-202ENST00000554196 PHACTR3Q96KR7 559 aa11.89□□□□□ -0.51
LINC00520-202ENST00000554196 EYA1Q99502 592 aa11.89□□□□□ -0.51
LINC00520-202ENST00000554196 SLAIN2Q9P270 581 aa11.89□□□□□ -0.51
LINC00520-202ENST00000554196 N4BP2Q86UW6 1770 aaPredicted RBP11.89□□□□□ -0.51
LINC00520-202ENST00000554196 PHLPP1O60346 1717 aa11.89□□□□□ -0.51
LINC00520-202ENST00000554196 WNK3Q9BYP7 1800 aa11.88□□□□□ -0.51
LINC00520-202ENST00000554196 OVOS2A0A0G2JMS6 1433 aa11.88□□□□□ -0.51
LINC00520-202ENST00000554196 HTATSF1O43719 755 aaKnown RBP11.88□□□□□ -0.51
LINC00520-202ENST00000554196 COL14A1Q05707 1796 aaKnown RBP11.87□□□□□ -0.51
LINC00520-202ENST00000554196 TPRNQ4KMQ1 711 aa11.87□□□□□ -0.51
LINC00520-202ENST00000554196 MAP3K5Q99683 1374 aa11.87□□□□□ -0.51
LINC00520-202ENST00000554196 PLCH1Q4KWH8 1693 aa11.86□□□□□ -0.51
LINC00520-202ENST00000554196 ERBB3P21860 1342 aa11.86□□□□□ -0.51
LINC00520-202ENST00000554196 ZNF853P0CG23 659 aa11.85□□□□□ -0.51
LINC00520-202ENST00000554196 MS4A1P11836 297 aa11.85□□□□□ -0.51
LINC00520-202ENST00000554196 RARSP54136 660 aaKnown RBP11.85□□□□□ -0.51
LINC00520-202ENST00000554196 PDE3AQ14432 1141 aa11.85□□□□□ -0.51
LINC00520-202ENST00000554196 CFAP44Q96MT7 982 aa11.85□□□□□ -0.51
LINC00520-202ENST00000554196 COL16A1Q07092 1604 aaPredicted RBP11.85□□□□□ -0.51
LINC00520-202ENST00000554196 KIF16BQ96L93 1317 aa11.85□□□□□ -0.51
LINC00520-202ENST00000554196 CANXP27824 592 aaKnown RBP11.84□□□□□ -0.51
LINC00520-202ENST00000554196 ALDH1L2Q3SY69 923 aa11.84□□□□□ -0.51
LINC00520-202ENST00000554196 RTF1Q92541 710 aaKnown RBP11.84□□□□□ -0.51
LINC00520-202ENST00000554196 CRB1P82279 1406 aa11.84□□□□□ -0.51
LINC00520-202ENST00000554196 KIAA0232Q92628 1395 aa11.83□□□□□ -0.52
LINC00520-202ENST00000554196 EXOSC9Q06265 439 aaKnown RBP11.83□□□□□ -0.52
LINC00520-202ENST00000554196 AAMPQ13685 434 aa11.83□□□□□ -0.52
LINC00520-202ENST00000554196 ANKRD24Q8TF21 1146 aa11.83□□□□□ -0.52
LINC00520-202ENST00000554196 TSR2Q969E8 191 aaKnown RBP11.83□□□□□ -0.52
LINC00520-202ENST00000554196 LTV1Q96GA3 475 aaPredicted RBP11.83□□□□□ -0.52
LINC00520-202ENST00000554196 ZBTB7CA1YPR0 619 aa11.82□□□□□ -0.52
LINC00520-202ENST00000554196 MTHFSDQ2M296 383 aaKnown RBP11.82□□□□□ -0.52
LINC00520-202ENST00000554196 AMOTQ4VCS5 1084 aa11.82□□□□□ -0.52
LINC00520-202ENST00000554196 CCDC136Q96JN2 1154 aa11.82□□□□□ -0.52
LINC00520-202ENST00000554196 BABAM1Q9NWV8 329 aa11.82□□□□□ -0.52
LINC00520-202ENST00000554196 NWD2Q9ULI1 1742 aa11.82□□□□□ -0.52
LINC00520-202ENST00000554196 SOS1Q07889 1333 aaPredicted RBP11.82□□□□□ -0.52
LINC00520-202ENST00000554196 SHANK3Q9BYB0 1731 aa11.81□□□□□ -0.52
LINC00520-202ENST00000554196 GNAT3A8MTJ3 354 aa11.81□□□□□ -0.52
LINC00520-202ENST00000554196 DSG3P32926 999 aa11.81□□□□□ -0.52
LINC00520-202ENST00000554196 BRPF1P55201 1214 aaPredicted RBP11.81□□□□□ -0.52
LINC00520-202ENST00000554196 EXOC6Q8TAG9 804 aa11.81□□□□□ -0.52
LINC00520-202ENST00000554196 DDX17Q92841 729 aaKnown RBP11.81□□□□□ -0.52
LINC00520-202ENST00000554196 MBIPQ9NS73 344 aa11.81□□□□□ -0.52
LINC00520-202ENST00000554196 PLIN1O60240 522 aa11.8□□□□□ -0.52
LINC00520-202ENST00000554196 BCAR3O75815 825 aa11.8□□□□□ -0.52
LINC00520-202ENST00000554196 MYCNP04198 464 aaPredicted RBP11.8□□□□□ -0.52
LINC00520-202ENST00000554196 PLEKHO1Q53GL0 409 aaPredicted RBP11.8□□□□□ -0.52
LINC00520-202ENST00000554196 NBPF6Q5VWK0 638 aa11.8□□□□□ -0.52
LINC00520-202ENST00000554196 NBPF4Q96M43 638 aa11.8□□□□□ -0.52
LINC00520-202ENST00000554196 CRBNQ96SW2 442 aa11.8□□□□□ -0.52
LINC00520-202ENST00000554196 SMC4Q9NTJ3 1288 aa11.8□□□□□ -0.52
LINC00520-202ENST00000554196 COL5A2P05997 1499 aaPredicted RBP11.8□□□□□ -0.52
LINC00520-202ENST00000554196 NRAPQ86VF7 1730 aa11.8□□□□□ -0.52
LINC00520-202ENST00000554196 CEMIPQ8WUJ3 1361 aa11.79□□□□□ -0.52
LINC00520-202ENST00000554196 LAMB4A4D0S4 1761 aa11.79□□□□□ -0.52
LINC00520-202ENST00000554196 MRC1P22897 1456 aa11.79□□□□□ -0.52
LINC00520-202ENST00000554196 CHL1O00533 1208 aa11.79□□□□□ -0.52
LINC00520-202ENST00000554196 IPO8O15397 1037 aaKnown RBP11.79□□□□□ -0.52
LINC00520-202ENST00000554196 ZC3H6P61129 1189 aaKnown RBP11.79□□□□□ -0.52
LINC00520-202ENST00000554196 ZKSCAN2Q63HK3 967 aa11.79□□□□□ -0.52
LINC00520-202ENST00000554196 THUMPD2Q9BTF0 503 aaKnown RBP11.79□□□□□ -0.52
LINC00520-202ENST00000554196 LAS1LQ9Y4W2 734 aaKnown RBP11.79□□□□□ -0.52
LINC00520-202ENST00000554196 FAM83GA6ND36 823 aa11.78□□□□□ -0.52
LINC00520-202ENST00000554196 SLC4A2P04920 1241 aa11.78□□□□□ -0.52
LINC00520-202ENST00000554196 MEGF6O75095 1541 aa11.77□□□□□ -0.52
LINC00520-202ENST00000554196 TWISTNBQ3B726 338 aaPredicted RBP11.77□□□□□ -0.53
LINC00520-202ENST00000554196 AKAP4Q5JQC9 854 aa11.77□□□□□ -0.53
LINC00520-202ENST00000554196 B4GALNT3Q6L9W6 998 aa11.77□□□□□ -0.53
LINC00520-202ENST00000554196 MCM10Q7L590 875 aa11.77□□□□□ -0.53
LINC00520-202ENST00000554196 USHBP1Q8N6Y0 703 aa11.77□□□□□ -0.53
LINC00520-202ENST00000554196 ARXQ96QS3 562 aa11.77□□□□□ -0.53
LINC00520-202ENST00000554196 PRDM11Q9NQV5 511 aa11.77□□□□□ -0.53
LINC00520-202ENST00000554196 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.77□□□□□ -0.53
LINC00520-202ENST00000554196 DCTN1Q14203 1278 aa11.76□□□□□ -0.53
LINC00520-202ENST00000554196 C1orf141Q5JVX7 400 aa11.76□□□□□ -0.53
LINC00520-202ENST00000554196 ZNF530Q6P9A1 599 aaPredicted RBP11.76□□□□□ -0.53
LINC00520-202ENST00000554196 SSH1Q8WYL5 1049 aa11.76□□□□□ -0.53
LINC00520-202ENST00000554196 RAPGEF4Q8WZA2 1011 aa11.76□□□□□ -0.53
LINC00520-202ENST00000554196 LRRC59Q96AG4 307 aaKnown RBP11.76□□□□□ -0.53
LINC00520-202ENST00000554196 AXIN2Q9Y2T1 843 aa11.76□□□□□ -0.53
LINC00520-202ENST00000554196 WDR17Q8IZU2 1322 aa11.76□□□□□ -0.53
LINC00520-202ENST00000554196 PAPPAQ13219 1627 aa11.75□□□□□ -0.53
LINC00520-202ENST00000554196 UBR2Q8IWV8 1755 aa11.75□□□□□ -0.53
LINC00520-202ENST00000554196 VAMP4O75379 141 aa11.75□□□□□ -0.53
LINC00520-202ENST00000554196 CSB-PGBD3P0DP91 1061 aa11.75□□□□□ -0.53
LINC00520-202ENST00000554196 TATP17735 454 aaPredicted RBP11.75□□□□□ -0.53
LINC00520-202ENST00000554196 C20orf194Q5TEA3 1177 aa11.75□□□□□ -0.53
LINC00520-202ENST00000554196 FTSJ3Q8IY81 847 aaKnown RBP11.75□□□□□ -0.53
LINC00520-202ENST00000554196 DZIP1LQ8IYY4 767 aaKnown RBP11.75□□□□□ -0.53
LINC00520-202ENST00000554196 ARHGAP45Q92619 1136 aa11.75□□□□□ -0.53
LINC00520-202ENST00000554196 FRAT1Q92837 279 aaPredicted RBP11.75□□□□□ -0.53
LINC00520-202ENST00000554196 CHMP4AQ9BY43 222 aa11.75□□□□□ -0.53
LINC00520-202ENST00000554196 CHMP4BQ9H444 224 aaKnown RBP11.75□□□□□ -0.53
LINC00520-202ENST00000554196 ZNF219Q9P2Y4 722 aaPredicted RBP11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms