RNA–Protein interactions for RNA: ENST00000554170.1

XRCC3-206, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 4

Gene XRCC3, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-206ENST00000554170 LY75O60449 1722 aa17.69■□□□□ 0.42
XRCC3-206ENST00000554170 GOLGB1Q14789 3259 aaKnown RBP17.68■□□□□ 0.42
XRCC3-206ENST00000554170 SLC27A3Q5K4L6 730 aa17.68■□□□□ 0.42
XRCC3-206ENST00000554170 AKT1S1Q96B36 256 aa17.68■□□□□ 0.42
XRCC3-206ENST00000554170 SHANK3Q9BYB0 1731 aa17.68■□□□□ 0.42
XRCC3-206ENST00000554170 RGPD2P0DJD1 1756 aa17.68■□□□□ 0.42
XRCC3-206ENST00000554170 SLC16A10Q8TF71 515 aa17.67■□□□□ 0.42
XRCC3-206ENST00000554170 COG3Q96JB2 828 aa17.67■□□□□ 0.42
XRCC3-206ENST00000554170 KIF7Q2M1P5 1343 aa17.66■□□□□ 0.42
XRCC3-206ENST00000554170 C1QTNF8P60827 252 aa17.65■□□□□ 0.42
XRCC3-206ENST00000554170 GPR162Q16538 588 aa17.65■□□□□ 0.42
XRCC3-206ENST00000554170 DDX54Q8TDD1 881 aaKnown RBP17.65■□□□□ 0.42
XRCC3-206ENST00000554170 IP6K1Q92551 441 aa17.65■□□□□ 0.42
XRCC3-206ENST00000554170 PNPLA7Q6ZV29 1317 aa17.65■□□□□ 0.42
XRCC3-206ENST00000554170 SENP3-EIF4A1A0A087X0R7 540 aa17.64■□□□□ 0.41
XRCC3-206ENST00000554170 POLD1P28340 1107 aa17.64■□□□□ 0.41
XRCC3-206ENST00000554170 CARD14Q9BXL6 1004 aa17.64■□□□□ 0.41
XRCC3-206ENST00000554170 PANK3Q9H999 370 aa17.64■□□□□ 0.41
XRCC3-206ENST00000554170 NSD3Q9BZ95 1437 aa17.64■□□□□ 0.41
XRCC3-206ENST00000554170 FYB1O15117 783 aa17.63■□□□□ 0.41
XRCC3-206ENST00000554170 KLHL34Q8N239 644 aa17.62■□□□□ 0.41
XRCC3-206ENST00000554170 LTV1Q96GA3 475 aaPredicted RBP17.62■□□□□ 0.41
XRCC3-206ENST00000554170 GGNBP2Q9H3C7 697 aa17.62■□□□□ 0.41
XRCC3-206ENST00000554170 TFCP2L1Q9NZI6 479 aa17.62■□□□□ 0.41
XRCC3-206ENST00000554170 CGNL1Q0VF96 1302 aa17.62■□□□□ 0.41
XRCC3-206ENST00000554170 NSD2O96028 1365 aa17.62■□□□□ 0.41
XRCC3-206ENST00000554170 PRIM1P49642 420 aaKnown RBP17.61■□□□□ 0.41
XRCC3-206ENST00000554170 KCNQ4P56696 695 aa17.61■□□□□ 0.41
XRCC3-206ENST00000554170 SYTL4Q96C24 671 aaPredicted RBP17.61■□□□□ 0.41
XRCC3-206ENST00000554170 KIF20BQ96Q89 1820 aa17.61■□□□□ 0.41
XRCC3-206ENST00000554170 MAP3K19Q56UN5 1328 aa17.59■□□□□ 0.41
XRCC3-206ENST00000554170 MEGF6O75095 1541 aa17.58■□□□□ 0.41
XRCC3-206ENST00000554170 HOXC9P31274 260 aa17.58■□□□□ 0.4
XRCC3-206ENST00000554170 KNSTRNQ9Y448 316 aa17.58■□□□□ 0.4
XRCC3-206ENST00000554170 WASHC2AQ641Q2 1341 aa17.57■□□□□ 0.4
XRCC3-206ENST00000554170 PELP1Q8IZL8 1130 aaKnown RBP17.57■□□□□ 0.4
XRCC3-206ENST00000554170 NLGN2Q8NFZ4 835 aa17.57■□□□□ 0.4
XRCC3-206ENST00000554170 ZCRB1Q8TBF4 217 aaKnown RBP17.57■□□□□ 0.4
XRCC3-206ENST00000554170 C5P01031 1676 aa17.57■□□□□ 0.4
XRCC3-206ENST00000554170 TAF1LQ8IZX4 1826 aa17.56■□□□□ 0.4
XRCC3-206ENST00000554170 GIGYF1O75420 1035 aaPredicted RBP17.56■□□□□ 0.4
XRCC3-206ENST00000554170 AMPHP49418 695 aa17.56■□□□□ 0.4
XRCC3-206ENST00000554170 CCNL1Q9UK58 526 aaPredicted RBP17.56■□□□□ 0.4
XRCC3-206ENST00000554170 RTL1A6NKG5 1358 aa17.54■□□□□ 0.4
XRCC3-206ENST00000554170 FBLN1P23142 703 aa17.54■□□□□ 0.4
XRCC3-206ENST00000554170 YBX3P16989 372 aaKnown RBP eCLIP17.52■□□□□ 0.4
XRCC3-206ENST00000554170 COL23A1Q86Y22 540 aaPredicted RBP17.52■□□□□ 0.4
XRCC3-206ENST00000554170 CEP350Q5VT06 3117 aa17.52■□□□□ 0.39
XRCC3-206ENST00000554170 ITGB4P16144 1822 aa17.51■□□□□ 0.39
XRCC3-206ENST00000554170 MSH5O43196 834 aa17.51■□□□□ 0.39
XRCC3-206ENST00000554170 GRIN3BO60391 1043 aa17.51■□□□□ 0.39
XRCC3-206ENST00000554170 NBPF6Q5VWK0 638 aa17.51■□□□□ 0.39
XRCC3-206ENST00000554170 NBPF4Q96M43 638 aa17.51■□□□□ 0.39
XRCC3-206ENST00000554170 RRS1Q15050 365 aaKnown RBP17.5■□□□□ 0.39
XRCC3-206ENST00000554170 SMG6Q86US8 1419 aaKnown RBP17.49■□□□□ 0.39
XRCC3-206ENST00000554170 MORC1Q86VD1 984 aa17.49■□□□□ 0.39
XRCC3-206ENST00000554170 TOGARAM1Q9Y4F4 1720 aa17.48■□□□□ 0.39
XRCC3-206ENST00000554170 MSL1Q68DK7 614 aa17.48■□□□□ 0.39
XRCC3-206ENST00000554170 USHBP1Q8N6Y0 703 aa17.48■□□□□ 0.39
XRCC3-206ENST00000554170 RAPGEF4Q8WZA2 1011 aa17.48■□□□□ 0.39
XRCC3-206ENST00000554170 C4BP0C0L5 1744 aa17.47■□□□□ 0.39
XRCC3-206ENST00000554170 PER1O15534 1290 aaPredicted RBP17.47■□□□□ 0.39
XRCC3-206ENST00000554170 TNNT2P45379 298 aaPredicted RBP17.47■□□□□ 0.39
XRCC3-206ENST00000554170 UBR3Q6ZT12 1888 aa17.47■□□□□ 0.39
XRCC3-206ENST00000554170 ANKRD26Q9UPS8 1709 aa17.47■□□□□ 0.39
XRCC3-206ENST00000554170 PCDH11XQ9BZA7 1347 aa17.47■□□□□ 0.39
XRCC3-206ENST00000554170 PCDH11YQ9BZA8 1340 aa17.47■□□□□ 0.39
XRCC3-206ENST00000554170 KIF24Q5T7B8 1368 aa17.46■□□□□ 0.39
XRCC3-206ENST00000554170 TATP17735 454 aaPredicted RBP17.46■□□□□ 0.39
XRCC3-206ENST00000554170 HMGB2P26583 209 aaKnown RBP17.46■□□□□ 0.39
XRCC3-206ENST00000554170 AMER1Q5JTC6 1135 aaPredicted RBP17.46■□□□□ 0.39
XRCC3-206ENST00000554170 PKD1L3Q7Z443 1732 aa17.46■□□□□ 0.39
XRCC3-206ENST00000554170 PALLDQ8WX93 1383 aa17.45■□□□□ 0.38
XRCC3-206ENST00000554170 PPM1GO15355 546 aaPredicted RBP17.45■□□□□ 0.38
XRCC3-206ENST00000554170 CD2APQ9Y5K6 639 aa17.45■□□□□ 0.38
XRCC3-206ENST00000554170 INSRP06213 1382 aa17.44■□□□□ 0.38
XRCC3-206ENST00000554170 FLT4P35916 1363 aa17.44■□□□□ 0.38
XRCC3-206ENST00000554170 FLAD1Q8NFF5 587 aa17.44■□□□□ 0.38
XRCC3-206ENST00000554170 EMILIN1Q9Y6C2 1016 aa17.44■□□□□ 0.38
XRCC3-206ENST00000554170 ATP10DQ9P241 1426 aa17.44■□□□□ 0.38
XRCC3-206ENST00000554170 CC2D1BQ5T0F9 858 aaKnown RBP17.43■□□□□ 0.38
XRCC3-206ENST00000554170 MAP2P11137 1827 aaKnown RBP17.42■□□□□ 0.38
XRCC3-206ENST00000554170 HSP90AB2PQ58FF8 381 aa17.42■□□□□ 0.38
XRCC3-206ENST00000554170 MPRIPQ6WCQ1 1025 aa17.42■□□□□ 0.38
XRCC3-206ENST00000554170 POLKQ9UBT6 870 aa17.42■□□□□ 0.38
XRCC3-206ENST00000554170 CNGB1Q14028 1251 aaPredicted RBP17.41■□□□□ 0.38
XRCC3-206ENST00000554170 ADCY9O60503 1353 aa17.4■□□□□ 0.38
XRCC3-206ENST00000554170 NPC1L1Q9UHC9 1359 aa17.4■□□□□ 0.38
XRCC3-206ENST00000554170 CYP27B1O15528 508 aa17.4■□□□□ 0.38
XRCC3-206ENST00000554170 IFFO2Q5TF58 517 aa17.39■□□□□ 0.37
XRCC3-206ENST00000554170 AMIGO3Q86WK7 504 aa17.39■□□□□ 0.37
XRCC3-206ENST00000554170 SMARCC1Q92922 1105 aaPredicted RBP17.39■□□□□ 0.37
XRCC3-206ENST00000554170 AK7Q96M32 723 aa17.39■□□□□ 0.37
XRCC3-206ENST00000554170 GPBP1L1Q9HC44 474 aaPredicted RBP17.38■□□□□ 0.37
XRCC3-206ENST00000554170 NCAPD2Q15021 1401 aa17.38■□□□□ 0.37
XRCC3-206ENST00000554170 PIGBQ92521 554 aa17.36■□□□□ 0.37
XRCC3-206ENST00000554170 IGSF1Q8N6C5 1336 aa17.36■□□□□ 0.37
XRCC3-206ENST00000554170 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.35■□□□□ 0.37
XRCC3-206ENST00000554170 PHF14O94880 888 aa17.35■□□□□ 0.37
XRCC3-206ENST00000554170 DDX10Q13206 875 aaKnown RBP17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms