RNA–Protein interactions for RNA: ENST00000554116.5

TUBB3-204, Transcript of tubulin beta 3 class III, humanhuman

TSL 4

Gene TUBB3, Length 542 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-204ENST00000554116 HOXC9P31274 260 aa16.4■□□□□ 0.22
TUBB3-204ENST00000554116 PRIM1P49642 420 aaKnown RBP16.4■□□□□ 0.22
TUBB3-204ENST00000554116 TRIM26Q12899 539 aaPredicted RBP16.4■□□□□ 0.22
TUBB3-204ENST00000554116 TERF2IPQ9NYB0 399 aa16.4■□□□□ 0.22
TUBB3-204ENST00000554116 ANKRD36BQ8N2N9 1353 aa16.38■□□□□ 0.21
TUBB3-204ENST00000554116 SLC27A3Q5K4L6 730 aa16.38■□□□□ 0.21
TUBB3-204ENST00000554116 ST20-MTHFSA0A0A6YYL1 179 aa16.37■□□□□ 0.21
TUBB3-204ENST00000554116 GIGYF1O75420 1035 aaPredicted RBP16.37■□□□□ 0.21
TUBB3-204ENST00000554116 IFFO2Q5TF58 517 aa16.37■□□□□ 0.21
TUBB3-204ENST00000554116 SLC16A10Q8TF71 515 aa16.37■□□□□ 0.21
TUBB3-204ENST00000554116 GPR162Q16538 588 aa16.36■□□□□ 0.21
TUBB3-204ENST00000554116 NBPF6Q5VWK0 638 aa16.36■□□□□ 0.21
TUBB3-204ENST00000554116 NLGN2Q8NFZ4 835 aa16.36■□□□□ 0.21
TUBB3-204ENST00000554116 NBPF4Q96M43 638 aa16.36■□□□□ 0.21
TUBB3-204ENST00000554116 RRS1Q15050 365 aaKnown RBP16.34■□□□□ 0.21
TUBB3-204ENST00000554116 ZCRB1Q8TBF4 217 aaKnown RBP16.34■□□□□ 0.21
TUBB3-204ENST00000554116 COG3Q96JB2 828 aa16.34■□□□□ 0.21
TUBB3-204ENST00000554116 FYB1O15117 783 aa16.33■□□□□ 0.2
TUBB3-204ENST00000554116 SYTL4Q96C24 671 aaPredicted RBP16.33■□□□□ 0.2
TUBB3-204ENST00000554116 COL23A1Q86Y22 540 aaPredicted RBP16.32■□□□□ 0.2
TUBB3-204ENST00000554116 USHBP1Q8N6Y0 703 aa16.32■□□□□ 0.2
TUBB3-204ENST00000554116 TFCP2L1Q9NZI6 479 aa16.32■□□□□ 0.2
TUBB3-204ENST00000554116 TAF1LQ8IZX4 1826 aa16.31■□□□□ 0.2
TUBB3-204ENST00000554116 TONSLQ96HA7 1378 aa16.31■□□□□ 0.2
TUBB3-204ENST00000554116 POLD1P28340 1107 aa16.31■□□□□ 0.2
TUBB3-204ENST00000554116 AMPHP49418 695 aa16.31■□□□□ 0.2
TUBB3-204ENST00000554116 GGNBP2Q9H3C7 697 aa16.31■□□□□ 0.2
TUBB3-204ENST00000554116 RTL1A6NKG5 1358 aa16.3■□□□□ 0.2
TUBB3-204ENST00000554116 YBX3P16989 372 aaKnown RBP eCLIP16.3■□□□□ 0.2
TUBB3-204ENST00000554116 TOGARAM1Q9Y4F4 1720 aa16.3■□□□□ 0.2
TUBB3-204ENST00000554116 KLHL34Q8N239 644 aa16.29■□□□□ 0.2
TUBB3-204ENST00000554116 CCNL1Q9UK58 526 aaPredicted RBP16.29■□□□□ 0.2
TUBB3-204ENST00000554116 C5P01031 1676 aa16.29■□□□□ 0.2
TUBB3-204ENST00000554116 HSP90AB2PQ58FF8 381 aa16.28■□□□□ 0.2
TUBB3-204ENST00000554116 AMIGO3Q86WK7 504 aa16.28■□□□□ 0.2
TUBB3-204ENST00000554116 ITGB4P16144 1822 aa16.28■□□□□ 0.2
TUBB3-204ENST00000554116 CYP27B1O15528 508 aa16.27■□□□□ 0.2
TUBB3-204ENST00000554116 PELP1Q8IZL8 1130 aaKnown RBP16.27■□□□□ 0.2
TUBB3-204ENST00000554116 KIF20BQ96Q89 1820 aa16.26■□□□□ 0.19
TUBB3-204ENST00000554116 INSRP06213 1382 aa16.26■□□□□ 0.19
TUBB3-204ENST00000554116 USP47Q96K76 1375 aa16.26■□□□□ 0.19
TUBB3-204ENST00000554116 CGNL1Q0VF96 1302 aa16.25■□□□□ 0.19
TUBB3-204ENST00000554116 MAP2P11137 1827 aaKnown RBP16.25■□□□□ 0.19
TUBB3-204ENST00000554116 MSL1Q68DK7 614 aa16.25■□□□□ 0.19
TUBB3-204ENST00000554116 CARD14Q9BXL6 1004 aa16.25■□□□□ 0.19
TUBB3-204ENST00000554116 GRIN3BO60391 1043 aa16.24■□□□□ 0.19
TUBB3-204ENST00000554116 SMIM5Q71RC9 77 aa16.24■□□□□ 0.19
TUBB3-204ENST00000554116 NCAPD2Q15021 1401 aa16.24■□□□□ 0.19
TUBB3-204ENST00000554116 PKD1L3Q7Z443 1732 aa16.24■□□□□ 0.19
TUBB3-204ENST00000554116 UBR3Q6ZT12 1888 aa16.23■□□□□ 0.19
TUBB3-204ENST00000554116 C4BP0C0L5 1744 aa16.22■□□□□ 0.19
TUBB3-204ENST00000554116 RAPGEF4Q8WZA2 1011 aa16.22■□□□□ 0.19
TUBB3-204ENST00000554116 PALLDQ8WX93 1383 aa16.22■□□□□ 0.19
TUBB3-204ENST00000554116 TATP17735 454 aaPredicted RBP16.21■□□□□ 0.19
TUBB3-204ENST00000554116 EMILIN1Q9Y6C2 1016 aa16.21■□□□□ 0.19
TUBB3-204ENST00000554116 ANKRD26Q9UPS8 1709 aa16.21■□□□□ 0.19
TUBB3-204ENST00000554116 FLT4P35916 1363 aa16.21■□□□□ 0.19
TUBB3-204ENST00000554116 MSH5O43196 834 aa16.2■□□□□ 0.18
TUBB3-204ENST00000554116 SLC24A1O60721 1099 aa16.2■□□□□ 0.18
TUBB3-204ENST00000554116 MPRIPQ6WCQ1 1025 aa16.2■□□□□ 0.18
TUBB3-204ENST00000554116 KIF24Q5T7B8 1368 aa16.2■□□□□ 0.18
TUBB3-204ENST00000554116 PCDH11XQ9BZA7 1347 aa16.19■□□□□ 0.18
TUBB3-204ENST00000554116 PCDH11YQ9BZA8 1340 aa16.19■□□□□ 0.18
TUBB3-204ENST00000554116 TMF1P82094 1093 aa16.19■□□□□ 0.18
TUBB3-204ENST00000554116 NKX1-1Q15270 411 aaPredicted RBP16.19■□□□□ 0.18
TUBB3-204ENST00000554116 PIGBQ92521 554 aa16.19■□□□□ 0.18
TUBB3-204ENST00000554116 CD2APQ9Y5K6 639 aa16.18■□□□□ 0.18
TUBB3-204ENST00000554116 SMG6Q86US8 1419 aaKnown RBP16.18■□□□□ 0.18
TUBB3-204ENST00000554116 ATP10DQ9P241 1426 aa16.18■□□□□ 0.18
TUBB3-204ENST00000554116 ADCY9O60503 1353 aa16.16■□□□□ 0.18
TUBB3-204ENST00000554116 LINC00116Q8NCU8 138 aa16.15■□□□□ 0.18
TUBB3-204ENST00000554116 NSD3Q9BZ95 1437 aa16.15■□□□□ 0.18
TUBB3-204ENST00000554116 GPBP1L1Q9HC44 474 aaPredicted RBP16.15■□□□□ 0.18
TUBB3-204ENST00000554116 ITPK1Q13572 414 aa16.14■□□□□ 0.17
TUBB3-204ENST00000554116 FLAD1Q8NFF5 587 aa16.14■□□□□ 0.17
TUBB3-204ENST00000554116 EYA1Q99502 592 aa16.14■□□□□ 0.17
TUBB3-204ENST00000554116 WASHC2AQ641Q2 1341 aa16.14■□□□□ 0.17
TUBB3-204ENST00000554116 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.13■□□□□ 0.17
TUBB3-204ENST00000554116 HSPA6P17066 643 aa16.13■□□□□ 0.17
TUBB3-204ENST00000554116 ASAP1Q9ULH1 1129 aa16.13■□□□□ 0.17
TUBB3-204ENST00000554116 KIAA1551Q9HCM1 1747 aa16.13■□□□□ 0.17
TUBB3-204ENST00000554116 LOC102724428A0A0B4J2F2 783 aa16.12■□□□□ 0.17
TUBB3-204ENST00000554116 SIK1P57059 783 aa16.12■□□□□ 0.17
TUBB3-204ENST00000554116 SMARCC1Q92922 1105 aaPredicted RBP16.12■□□□□ 0.17
TUBB3-204ENST00000554116 PCGF6Q9BYE7 350 aa16.12■□□□□ 0.17
TUBB3-204ENST00000554116 HMGB2P26583 209 aaKnown RBP16.11■□□□□ 0.17
TUBB3-204ENST00000554116 SLC4A9Q96Q91 983 aa16.11■□□□□ 0.17
TUBB3-204ENST00000554116 POLKQ9UBT6 870 aa16.11■□□□□ 0.17
TUBB3-204ENST00000554116 PHF14O94880 888 aa16.1■□□□□ 0.17
TUBB3-204ENST00000554116 AK7Q96M32 723 aa16.1■□□□□ 0.17
TUBB3-204ENST00000554116 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.1■□□□□ 0.17
TUBB3-204ENST00000554116 WWC3Q9ULE0 1092 aa16.1■□□□□ 0.17
TUBB3-204ENST00000554116 IGSF1Q8N6C5 1336 aa16.1■□□□□ 0.17
TUBB3-204ENST00000554116 PCNTO95613 3336 aa16.1■□□□□ 0.17
TUBB3-204ENST00000554116 KIF13BQ9NQT8 1826 aa16.1■□□□□ 0.17
TUBB3-204ENST00000554116 PHKG2P15735 406 aa16.09■□□□□ 0.17
TUBB3-204ENST00000554116 SSFA2P28290 1259 aa16.09■□□□□ 0.17
TUBB3-204ENST00000554116 ATG3Q9NT62 314 aa16.09■□□□□ 0.17
TUBB3-204ENST00000554116 PPM1GO15355 546 aaPredicted RBP16.08■□□□□ 0.16
TUBB3-204ENST00000554116 CDCA8Q53HL2 280 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms