RNA–Protein interactions for RNA: ENST00000554034.5

CDH24-205, Transcript of cadherin 24, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH24, Length 2,759 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH24-205ENST00000554034 RBM27Q9P2N5 1060 aaKnown RBP23.3■■□□□ 1.32
CDH24-205ENST00000554034 ATP7BP35670 1465 aa23.3■■□□□ 1.32
CDH24-205ENST00000554034 INTS3Q68E01 1043 aaKnown RBP23.3■■□□□ 1.32
CDH24-205ENST00000554034 CPS1P31327 1500 aa23.29■■□□□ 1.32
CDH24-205ENST00000554034 SLC4A10Q6U841 1118 aa23.29■■□□□ 1.32
CDH24-205ENST00000554034 F6X3S4 739 aa23.28■■□□□ 1.32
CDH24-205ENST00000554034 PRPF40AO75400 957 aaKnown RBP23.28■■□□□ 1.32
CDH24-205ENST00000554034 LMBRD1Q9NUN5 540 aa23.28■■□□□ 1.32
CDH24-205ENST00000554034 CDK12Q9NYV4 1490 aaPredicted RBP23.28■■□□□ 1.32
CDH24-205ENST00000554034 PTMSP20962 102 aa23.28■■□□□ 1.32
CDH24-205ENST00000554034 EDC4Q6P2E9 1401 aaKnown RBP23.28■■□□□ 1.32
CDH24-205ENST00000554034 RGS12O14924 1447 aa23.27■■□□□ 1.32
CDH24-205ENST00000554034 ZSCAN23Q3MJ62 389 aa23.27■■□□□ 1.32
CDH24-205ENST00000554034 HSP90AA2PQ14568 343 aaPredicted RBP23.27■■□□□ 1.32
CDH24-205ENST00000554034 CPSF1Q10570 1443 aaKnown RBP23.26■■□□□ 1.31
CDH24-205ENST00000554034 CCDC173Q0VFZ6 552 aa23.26■■□□□ 1.31
CDH24-205ENST00000554034 EIF4A2Q14240 407 aaKnown RBP23.26■■□□□ 1.31
CDH24-205ENST00000554034 CLEC17AQ6ZS10 378 aa23.26■■□□□ 1.31
CDH24-205ENST00000554034 RTL1A6NKG5 1358 aa23.26■■□□□ 1.31
CDH24-205ENST00000554034 NOL8Q76FK4 1167 aaKnown RBP23.26■■□□□ 1.31
CDH24-205ENST00000554034 RICTORQ6R327 1708 aa23.25■■□□□ 1.31
CDH24-205ENST00000554034 SLC4A2P04920 1241 aa23.25■■□□□ 1.31
CDH24-205ENST00000554034 CYP2E1P05181 493 aaPredicted RBP23.25■■□□□ 1.31
CDH24-205ENST00000554034 ZDHHC9Q9Y397 364 aa23.25■■□□□ 1.31
CDH24-205ENST00000554034 METP08581 1390 aa23.25■■□□□ 1.31
CDH24-205ENST00000554034 NUCB2P80303 420 aa23.24■■□□□ 1.31
CDH24-205ENST00000554034 G2E3Q7L622 706 aa23.24■■□□□ 1.31
CDH24-205ENST00000554034 RBSNQ9H1K0 784 aa23.24■■□□□ 1.31
CDH24-205ENST00000554034 FOXO3O43524 673 aa23.23■■□□□ 1.31
CDH24-205ENST00000554034 PRIM1P49642 420 aaKnown RBP23.23■■□□□ 1.31
CDH24-205ENST00000554034 GPT2Q8TD30 523 aa23.23■■□□□ 1.31
CDH24-205ENST00000554034 ANP32BQ92688 251 aaKnown RBP23.23■■□□□ 1.31
CDH24-205ENST00000554034 TSPOAP1O95153 1857 aa23.23■■□□□ 1.31
CDH24-205ENST00000554034 RPAP2Q8IXW5 612 aaPredicted RBP23.23■■□□□ 1.31
CDH24-205ENST00000554034 PPP1R9BQ96SB3 815 aa23.23■■□□□ 1.31
CDH24-205ENST00000554034 NSFL1CQ9UNZ2 370 aaKnown RBP23.23■■□□□ 1.31
CDH24-205ENST00000554034 HSP90AB2PQ58FF8 381 aa23.23■■□□□ 1.31
CDH24-205ENST00000554034 RIMBP3CA6NJZ7 1639 aa23.22■■□□□ 1.31
CDH24-205ENST00000554034 RIMBP3BA6NNM3 1639 aa23.22■■□□□ 1.31
CDH24-205ENST00000554034 RIMBP3Q9UFD9 1639 aa23.22■■□□□ 1.31
CDH24-205ENST00000554034 EXOC6BQ9Y2D4 811 aa23.22■■□□□ 1.31
CDH24-205ENST00000554034 CCDC61Q9Y6R9 512 aa23.22■■□□□ 1.31
CDH24-205ENST00000554034 ST18O60284 1047 aa23.22■■□□□ 1.31
CDH24-205ENST00000554034 CASC1Q6TDU7 716 aa23.21■■□□□ 1.31
CDH24-205ENST00000554034 CHL1O00533 1208 aa23.21■■□□□ 1.31
CDH24-205ENST00000554034 FOXD4L6Q3SYB3 417 aaPredicted RBP23.21■■□□□ 1.31
CDH24-205ENST00000554034 FOXD4L3Q6VB84 417 aaPredicted RBP23.21■■□□□ 1.31
CDH24-205ENST00000554034 AATKQ6ZMQ8 1374 aa23.2■■□□□ 1.3
CDH24-205ENST00000554034 KIAA1211Q6ZU35 1233 aa23.2■■□□□ 1.3
CDH24-205ENST00000554034 ZSCAN30Q86W11 494 aa23.2■■□□□ 1.3
CDH24-205ENST00000554034 PRR36Q9H6K5 1346 aa23.2■■□□□ 1.3
CDH24-205ENST00000554034 NEK4P51957 841 aa23.19■■□□□ 1.3
CDH24-205ENST00000554034 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.19■■□□□ 1.3
CDH24-205ENST00000554034 A2ML1A8K2U0 1454 aa23.19■■□□□ 1.3
CDH24-205ENST00000554034 ZNF445P59923 1031 aa23.18■■□□□ 1.3
CDH24-205ENST00000554034 NECTIN2Q92692 538 aa23.18■■□□□ 1.3
CDH24-205ENST00000554034 ERC2O15083 957 aa23.18■■□□□ 1.3
CDH24-205ENST00000554034 REC8O95072 547 aa23.17■■□□□ 1.3
CDH24-205ENST00000554034 MSNP26038 577 aaKnown RBP23.17■■□□□ 1.3
CDH24-205ENST00000554034 TMEM63CQ9P1W3 806 aa23.17■■□□□ 1.3
CDH24-205ENST00000554034 KIF24Q5T7B8 1368 aa23.17■■□□□ 1.3
CDH24-205ENST00000554034 SYCE3A1L190 88 aa23.17■■□□□ 1.3
CDH24-205ENST00000554034 PDE1AP54750 535 aa23.17■■□□□ 1.3
CDH24-205ENST00000554034 IBTKQ9P2D0 1353 aaPredicted RBP23.16■■□□□ 1.3
CDH24-205ENST00000554034 REREQ9P2R6 1566 aa23.16■■□□□ 1.3
CDH24-205ENST00000554034 PALD1Q9ULE6 856 aa23.16■■□□□ 1.3
CDH24-205ENST00000554034 RNF214Q8ND24 703 aa23.15■■□□□ 1.3
CDH24-205ENST00000554034 TMX3Q96JJ7 454 aa23.14■■□□□ 1.29
CDH24-205ENST00000554034 TPRNQ4KMQ1 711 aa23.13■■□□□ 1.29
CDH24-205ENST00000554034 VSIG10Q8N0Z9 540 aa23.13■■□□□ 1.29
CDH24-205ENST00000554034 CWC22Q9HCG8 908 aaKnown RBP23.13■■□□□ 1.29
CDH24-205ENST00000554034 DLC1Q96QB1 1528 aa23.13■■□□□ 1.29
CDH24-205ENST00000554034 RRP9O43818 475 aaKnown RBP23.13■■□□□ 1.29
CDH24-205ENST00000554034 TSPYL4Q9UJ04 414 aa23.12■■□□□ 1.29
CDH24-205ENST00000554034 PTPRCP08575 1304 aa23.12■■□□□ 1.29
CDH24-205ENST00000554034 RILPL2Q969X0 211 aa23.12■■□□□ 1.29
CDH24-205ENST00000554034 XPCQ01831 940 aaPredicted RBP23.12■■□□□ 1.29
CDH24-205ENST00000554034 TRIM6-TRIM34B2RNG4 842 aa23.11■■□□□ 1.29
CDH24-205ENST00000554034 UPF3BQ9BZI7 483 aaKnown RBP23.11■■□□□ 1.29
CDH24-205ENST00000554034 HMMRO75330 724 aa23.1■■□□□ 1.29
CDH24-205ENST00000554034 GDPD2Q9HCC8 539 aa23.1■■□□□ 1.29
CDH24-205ENST00000554034 ANO2Q9NQ90 1003 aa23.1■■□□□ 1.29
CDH24-205ENST00000554034 PNMA6EA0A0J9YXQ4 647 aa23.1■■□□□ 1.29
CDH24-205ENST00000554034 DIP2BQ9P265 1576 aa23.09■■□□□ 1.29
CDH24-205ENST00000554034 ZBTB7CA1YPR0 619 aa23.09■■□□□ 1.29
CDH24-205ENST00000554034 MTHFSDQ2M296 383 aaKnown RBP23.09■■□□□ 1.29
CDH24-205ENST00000554034 EIF2AK3Q9NZJ5 1116 aaKnown RBP23.09■■□□□ 1.29
CDH24-205ENST00000554034 TTC21BQ7Z4L5 1316 aa23.09■■□□□ 1.29
CDH24-205ENST00000554034 SETD1AO15047 1707 aaKnown RBP23.09■■□□□ 1.29
CDH24-205ENST00000554034 ACEP12821 1306 aa23.09■■□□□ 1.29
CDH24-205ENST00000554034 MAP3K19Q56UN5 1328 aa23.09■■□□□ 1.29
CDH24-205ENST00000554034 RBM10P98175 930 aaKnown RBP23.08■■□□□ 1.29
CDH24-205ENST00000554034 R3HCC1Q9Y3T6 440 aaKnown RBP23.08■■□□□ 1.29
CDH24-205ENST00000554034 UNC5CLQ8IV45 518 aa23.08■■□□□ 1.29
CDH24-205ENST00000554034 KIAA0232Q92628 1395 aa23.07■■□□□ 1.28
CDH24-205ENST00000554034 HAP1P54257 671 aaPredicted RBP23.07■■□□□ 1.28
CDH24-205ENST00000554034 ESYT1Q9BSJ8 1104 aa23.07■■□□□ 1.28
CDH24-205ENST00000554034 CRB1P82279 1406 aa23.07■■□□□ 1.28
CDH24-205ENST00000554034 OFD1O75665 1012 aa23.06■■□□□ 1.28
CDH24-205ENST00000554034 MPNDQ8N594 471 aa23.06■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms