RNA–Protein interactions for RNA: ENST00000553991.1

AF111169.3-201, humanhuman

TSL 5 BASIC

Gene AF111169.3, Length 756 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AF111169.3-201ENST00000553991 CCNL1Q9UK58 526 aaPredicted RBP18.09■□□□□ 0.49
AF111169.3-201ENST00000553991 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.08■□□□□ 0.48
AF111169.3-201ENST00000553991 MSL1Q68DK7 614 aa18.07■□□□□ 0.48
AF111169.3-201ENST00000553991 TUBGCP6Q96RT7 1819 aa18.07■□□□□ 0.48
AF111169.3-201ENST00000553991 NSD2O96028 1365 aa18.06■□□□□ 0.48
AF111169.3-201ENST00000553991 APLP1P51693 650 aa18.05■□□□□ 0.48
AF111169.3-201ENST00000553991 NME9Q86XW9 330 aa18.05■□□□□ 0.48
AF111169.3-201ENST00000553991 HMGB2P26583 209 aaKnown RBP18.04■□□□□ 0.48
AF111169.3-201ENST00000553991 KIF3CO14782 793 aa18.03■□□□□ 0.48
AF111169.3-201ENST00000553991 FLAD1Q8NFF5 587 aa18.03■□□□□ 0.48
AF111169.3-201ENST00000553991 USP47Q96K76 1375 aa18.03■□□□□ 0.48
AF111169.3-201ENST00000553991 SBNO2Q9Y2G9 1366 aa18.03■□□□□ 0.48
AF111169.3-201ENST00000553991 IP6K1Q92551 441 aa18.02■□□□□ 0.48
AF111169.3-201ENST00000553991 PCGF6Q9BYE7 350 aa18.02■□□□□ 0.48
AF111169.3-201ENST00000553991 USP54Q70EL1 1684 aa18.02■□□□□ 0.47
AF111169.3-201ENST00000553991 LY75O60449 1722 aa18.01■□□□□ 0.47
AF111169.3-201ENST00000553991 ZCRB1Q8TBF4 217 aaKnown RBP18■□□□□ 0.47
AF111169.3-201ENST00000553991 TIMELESSQ9UNS1 1208 aa18■□□□□ 0.47
AF111169.3-201ENST00000553991 MON2Q7Z3U7 1717 aa18■□□□□ 0.47
AF111169.3-201ENST00000553991 LTV1Q96GA3 475 aaPredicted RBP17.99■□□□□ 0.47
AF111169.3-201ENST00000553991 CARD11Q9BXL7 1154 aa17.99■□□□□ 0.47
AF111169.3-201ENST00000553991 LTN1O94822 1766 aa17.99■□□□□ 0.47
AF111169.3-201ENST00000553991 IGSF1Q8N6C5 1336 aa17.98■□□□□ 0.47
AF111169.3-201ENST00000553991 DNAJC5GQ8N7S2 189 aa17.98■□□□□ 0.47
AF111169.3-201ENST00000553991 HDGFL2Q7Z4V5 671 aaPredicted RBP17.97■□□□□ 0.47
AF111169.3-201ENST00000553991 DOT1LQ8TEK3 1739 aa17.97■□□□□ 0.47
AF111169.3-201ENST00000553991 EDC4Q6P2E9 1401 aaKnown RBP17.97■□□□□ 0.47
AF111169.3-201ENST00000553991 CD163L1Q9NR16 1453 aa17.96■□□□□ 0.47
AF111169.3-201ENST00000553991 TOMM70O94826 608 aa17.95■□□□□ 0.46
AF111169.3-201ENST00000553991 FAM208AQ9UK61 1670 aaKnown RBP17.95■□□□□ 0.46
AF111169.3-201ENST00000553991 MEGF6O75095 1541 aa17.93■□□□□ 0.46
AF111169.3-201ENST00000553991 TMC1Q8TDI8 760 aa17.93■□□□□ 0.46
AF111169.3-201ENST00000553991 WWC3Q9ULE0 1092 aa17.93■□□□□ 0.46
AF111169.3-201ENST00000553991 CGNL1Q0VF96 1302 aa17.93■□□□□ 0.46
AF111169.3-201ENST00000553991 HOXC9P31274 260 aa17.92■□□□□ 0.46
AF111169.3-201ENST00000553991 AK7Q96M32 723 aa17.92■□□□□ 0.46
AF111169.3-201ENST00000553991 TERF2IPQ9NYB0 399 aa17.92■□□□□ 0.46
AF111169.3-201ENST00000553991 PALLDQ8WX93 1383 aa17.91■□□□□ 0.46
AF111169.3-201ENST00000553991 SLC12A5Q9H2X9 1139 aa17.91■□□□□ 0.46
AF111169.3-201ENST00000553991 MAP3K19Q56UN5 1328 aa17.91■□□□□ 0.46
AF111169.3-201ENST00000553991 NSD3Q9BZ95 1437 aa17.9■□□□□ 0.46
AF111169.3-201ENST00000553991 SLC24A1O60721 1099 aa17.9■□□□□ 0.46
AF111169.3-201ENST00000553991 AMPHP49418 695 aa17.9■□□□□ 0.46
AF111169.3-201ENST00000553991 CICQ96RK0 1608 aaPredicted RBP17.9■□□□□ 0.46
AF111169.3-201ENST00000553991 C5P01031 1676 aa17.9■□□□□ 0.46
AF111169.3-201ENST00000553991 A0A1W2PP64 1363 aa17.89■□□□□ 0.45
AF111169.3-201ENST00000553991 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.88■□□□□ 0.45
AF111169.3-201ENST00000553991 COL13A1Q5TAT6 717 aaPredicted RBP17.88■□□□□ 0.45
AF111169.3-201ENST00000553991 SMARCC1Q92922 1105 aaPredicted RBP17.88■□□□□ 0.45
AF111169.3-201ENST00000553991 PHF14O94880 888 aa17.87■□□□□ 0.45
AF111169.3-201ENST00000553991 AMIGO3Q86WK7 504 aa17.87■□□□□ 0.45
AF111169.3-201ENST00000553991 CCER1Q8TC90 406 aaPredicted RBP17.87■□□□□ 0.45
AF111169.3-201ENST00000553991 RAPGEF4Q8WZA2 1011 aa17.87■□□□□ 0.45
AF111169.3-201ENST00000553991 COG3Q96JB2 828 aa17.87■□□□□ 0.45
AF111169.3-201ENST00000553991 SSFA2P28290 1259 aa17.86■□□□□ 0.45
AF111169.3-201ENST00000553991 JMYQ8N9B5 988 aa17.86■□□□□ 0.45
AF111169.3-201ENST00000553991 RBM46Q8TBY0 533 aaKnown RBP17.86■□□□□ 0.45
AF111169.3-201ENST00000553991 KLRG1Q96E93 195 aa17.86■□□□□ 0.45
AF111169.3-201ENST00000553991 PUS7Q96PZ0 661 aaKnown RBP17.86■□□□□ 0.45
AF111169.3-201ENST00000553991 PCDH11XQ9BZA7 1347 aa17.86■□□□□ 0.45
AF111169.3-201ENST00000553991 PCDH11YQ9BZA8 1340 aa17.86■□□□□ 0.45
AF111169.3-201ENST00000553991 RTL1A6NKG5 1358 aa17.85■□□□□ 0.45
AF111169.3-201ENST00000553991 NBPF6Q5VWK0 638 aa17.85■□□□□ 0.45
AF111169.3-201ENST00000553991 MPRIPQ6WCQ1 1025 aa17.85■□□□□ 0.45
AF111169.3-201ENST00000553991 NBPF4Q96M43 638 aa17.85■□□□□ 0.45
AF111169.3-201ENST00000553991 C4BP0C0L5 1744 aa17.84■□□□□ 0.45
AF111169.3-201ENST00000553991 TATP17735 454 aaPredicted RBP17.84■□□□□ 0.45
AF111169.3-201ENST00000553991 NMRK2Q9NPI5 230 aa17.84■□□□□ 0.45
AF111169.3-201ENST00000553991 CAPN15O75808 1086 aa17.83■□□□□ 0.44
AF111169.3-201ENST00000553991 PRELPP51888 382 aa17.82■□□□□ 0.44
AF111169.3-201ENST00000553991 TGFB2P61812 414 aa17.82■□□□□ 0.44
AF111169.3-201ENST00000553991 TNS4Q8IZW8 715 aa17.82■□□□□ 0.44
AF111169.3-201ENST00000553991 USHBP1Q8N6Y0 703 aa17.82■□□□□ 0.44
AF111169.3-201ENST00000553991 PCNTO95613 3336 aa17.82■□□□□ 0.44
AF111169.3-201ENST00000553991 PXDNLA1KZ92 1463 aa17.82■□□□□ 0.44
AF111169.3-201ENST00000553991 TAF1LQ8IZX4 1826 aa17.82■□□□□ 0.44
AF111169.3-201ENST00000553991 SMG6Q86US8 1419 aaKnown RBP17.81■□□□□ 0.44
AF111169.3-201ENST00000553991 FBLN1P23142 703 aa17.81■□□□□ 0.44
AF111169.3-201ENST00000553991 FSTL1Q12841 308 aa17.81■□□□□ 0.44
AF111169.3-201ENST00000553991 SMIM5Q71RC9 77 aa17.81■□□□□ 0.44
AF111169.3-201ENST00000553991 C16orf71Q8IYS4 520 aaPredicted RBP17.81■□□□□ 0.44
AF111169.3-201ENST00000553991 BCS1LQ9Y276 419 aa17.81■□□□□ 0.44
AF111169.3-201ENST00000553991 TOGARAM1Q9Y4F4 1720 aa17.81■□□□□ 0.44
AF111169.3-201ENST00000553991 ST20-MTHFSA0A0A6YYL1 179 aa17.8■□□□□ 0.44
AF111169.3-201ENST00000553991 MMP10P09238 476 aa17.8■□□□□ 0.44
AF111169.3-201ENST00000553991 TESK2Q96S53 571 aa17.8■□□□□ 0.44
AF111169.3-201ENST00000553991 WDR90Q96KV7 1748 aa17.79■□□□□ 0.44
AF111169.3-201ENST00000553991 CYP27B1O15528 508 aa17.79■□□□□ 0.44
AF111169.3-201ENST00000553991 HTRA3P83110 453 aa17.79■□□□□ 0.44
AF111169.3-201ENST00000553991 ARHGAP27Q6ZUM4 889 aa17.79■□□□□ 0.44
AF111169.3-201ENST00000553991 LINC00116Q8NCU8 138 aa17.79■□□□□ 0.44
AF111169.3-201ENST00000553991 UBR3Q6ZT12 1888 aa17.78■□□□□ 0.44
AF111169.3-201ENST00000553991 LOC102724428A0A0B4J2F2 783 aa17.78■□□□□ 0.44
AF111169.3-201ENST00000553991 SIK1P57059 783 aa17.78■□□□□ 0.44
AF111169.3-201ENST00000553991 RRS1Q15050 365 aaKnown RBP17.78■□□□□ 0.44
AF111169.3-201ENST00000553991 PIGBQ92521 554 aa17.78■□□□□ 0.44
AF111169.3-201ENST00000553991 PLEKHG2Q9H7P9 1386 aa17.78■□□□□ 0.44
AF111169.3-201ENST00000553991 GNPATO15228 680 aa17.77■□□□□ 0.44
AF111169.3-201ENST00000553991 RGPD2P0DJD1 1756 aa17.76■□□□□ 0.43
AF111169.3-201ENST00000553991 A0A0G2JLW4 131 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms