RNA–Protein interactions for RNA: ENST00000553942.5

MARK3-207, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 1 (best) BASIC

Gene MARK3, Length 2,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-207ENST00000553942 COL5A2P05997 1499 aaPredicted RBP11.93□□□□□ -0.5
MARK3-207ENST00000553942 CPDO75976 1380 aa11.93□□□□□ -0.5
MARK3-207ENST00000553942 RTL5Q5HYW3 569 aaPredicted RBP11.93□□□□□ -0.5
MARK3-207ENST00000553942 MPRIPQ6WCQ1 1025 aa11.93□□□□□ -0.5
MARK3-207ENST00000553942 NGLY1Q96IV0 654 aa11.93□□□□□ -0.5
MARK3-207ENST00000553942 LGR6Q9HBX8 967 aa11.93□□□□□ -0.5
MARK3-207ENST00000553942 ELL2O00472 640 aaPredicted RBP11.92□□□□□ -0.5
MARK3-207ENST00000553942 KRT24Q2M2I5 525 aa11.92□□□□□ -0.5
MARK3-207ENST00000553942 MEGF6O75095 1541 aa11.92□□□□□ -0.5
MARK3-207ENST00000553942 NEFMP07197 916 aa11.91□□□□□ -0.5
MARK3-207ENST00000553942 GOLGA2Q08379 1002 aa11.91□□□□□ -0.5
MARK3-207ENST00000553942 IL27Q8NEV9 243 aa11.91□□□□□ -0.5
MARK3-207ENST00000553942 KDRP35968 1356 aa11.91□□□□□ -0.5
MARK3-207ENST00000553942 TCERG1O14776 1098 aaKnown RBP11.91□□□□□ -0.5
MARK3-207ENST00000553942 WDR17Q8IZU2 1322 aa11.91□□□□□ -0.5
MARK3-207ENST00000553942 DUSP27Q5VZP5 1158 aa11.9□□□□□ -0.5
MARK3-207ENST00000553942 DDX54Q8TDD1 881 aaKnown RBP11.9□□□□□ -0.5
MARK3-207ENST00000553942 JCADQ9P266 1359 aa11.9□□□□□ -0.5
MARK3-207ENST00000553942 ZNF530Q6P9A1 599 aaPredicted RBP11.9□□□□□ -0.5
MARK3-207ENST00000553942 BCL2L13Q9BXK5 485 aa11.9□□□□□ -0.5
MARK3-207ENST00000553942 KIF24Q5T7B8 1368 aa11.9□□□□□ -0.51
MARK3-207ENST00000553942 LMO7Q8WWI1 1683 aa11.89□□□□□ -0.51
MARK3-207ENST00000553942 DLG5Q8TDM6 1919 aa11.89□□□□□ -0.51
MARK3-207ENST00000553942 SLFN5Q08AF3 891 aa11.89□□□□□ -0.51
MARK3-207ENST00000553942 FAM182BQ5T319 152 aa11.89□□□□□ -0.51
MARK3-207ENST00000553942 IL17REQ8NFR9 667 aa11.89□□□□□ -0.51
MARK3-207ENST00000553942 PLIN1O60240 522 aa11.89□□□□□ -0.51
MARK3-207ENST00000553942 MEX3CQ5U5Q3 659 aaKnown RBP11.89□□□□□ -0.51
MARK3-207ENST00000553942 RAPGEF4Q8WZA2 1011 aa11.89□□□□□ -0.51
MARK3-207ENST00000553942 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.89□□□□□ -0.51
MARK3-207ENST00000553942 DAXXQ9UER7 740 aaPredicted RBP11.89□□□□□ -0.51
MARK3-207ENST00000553942 NBR1Q14596 966 aa11.88□□□□□ -0.51
MARK3-207ENST00000553942 CYP27B1O15528 508 aa11.87□□□□□ -0.51
MARK3-207ENST00000553942 KCNQ3O43525 872 aa11.86□□□□□ -0.51
MARK3-207ENST00000553942 FAM98CQ17RN3 349 aaKnown RBP11.86□□□□□ -0.51
MARK3-207ENST00000553942 TSPYL6Q8N831 410 aa11.86□□□□□ -0.51
MARK3-207ENST00000553942 COL22A1Q8NFW1 1626 aaPredicted RBP11.86□□□□□ -0.51
MARK3-207ENST00000553942 FAM208AQ9UK61 1670 aaKnown RBP11.86□□□□□ -0.51
MARK3-207ENST00000553942 A0A0G2JS52 829 aa11.86□□□□□ -0.51
MARK3-207ENST00000553942 TATP17735 454 aaPredicted RBP11.86□□□□□ -0.51
MARK3-207ENST00000553942 EXOSC9Q06265 439 aaKnown RBP11.86□□□□□ -0.51
MARK3-207ENST00000553942 GNAT3A8MTJ3 354 aa11.85□□□□□ -0.51
MARK3-207ENST00000553942 BCAR3O75815 825 aa11.85□□□□□ -0.51
MARK3-207ENST00000553942 PNNQ9H307 717 aaKnown RBP11.85□□□□□ -0.51
MARK3-207ENST00000553942 MBIPQ9NS73 344 aa11.85□□□□□ -0.51
MARK3-207ENST00000553942 USP21Q9UK80 565 aa11.85□□□□□ -0.51
MARK3-207ENST00000553942 RTF1Q92541 710 aaKnown RBP11.85□□□□□ -0.51
MARK3-207ENST00000553942 NECTIN2Q92692 538 aa11.85□□□□□ -0.51
MARK3-207ENST00000553942 PPP4R2Q9NY27 417 aa11.85□□□□□ -0.51
MARK3-207ENST00000553942 CARD10Q9BWT7 1032 aa11.84□□□□□ -0.51
MARK3-207ENST00000553942 BCL9LQ86UU0 1499 aa11.84□□□□□ -0.51
MARK3-207ENST00000553942 PLCH1Q4KWH8 1693 aa11.84□□□□□ -0.51
MARK3-207ENST00000553942 AFF2P51816 1311 aa11.84□□□□□ -0.51
MARK3-207ENST00000553942 IL2RBP14784 551 aa11.84□□□□□ -0.51
MARK3-207ENST00000553942 SLC39A6Q13433 755 aa11.84□□□□□ -0.51
MARK3-207ENST00000553942 PLEKHO1Q53GL0 409 aaPredicted RBP11.84□□□□□ -0.51
MARK3-207ENST00000553942 CRB1P82279 1406 aa11.83□□□□□ -0.51
MARK3-207ENST00000553942 CCDC27Q2M243 656 aa11.83□□□□□ -0.52
MARK3-207ENST00000553942 TRMT2AQ8IZ69 625 aaKnown RBP11.83□□□□□ -0.52
MARK3-207ENST00000553942 C8orf58Q8NAV2 365 aa11.83□□□□□ -0.52
MARK3-207ENST00000553942 GAS2L2Q8NHY3 880 aa11.83□□□□□ -0.52
MARK3-207ENST00000553942 TNNQ9UQP3 1299 aa11.83□□□□□ -0.52
MARK3-207ENST00000553942 PRAMEF22A3QJZ6 481 aa11.83□□□□□ -0.52
MARK3-207ENST00000553942 E9PSI1 815 aa11.83□□□□□ -0.52
MARK3-207ENST00000553942 PHKG2P15735 406 aa11.83□□□□□ -0.52
MARK3-207ENST00000553942 C1orf141Q5JVX7 400 aa11.83□□□□□ -0.52
MARK3-207ENST00000553942 UNC5CLQ8IV45 518 aa11.83□□□□□ -0.52
MARK3-207ENST00000553942 MAP3K5Q99683 1374 aa11.82□□□□□ -0.52
MARK3-207ENST00000553942 WDR63Q8IWG1 891 aa11.82□□□□□ -0.52
MARK3-207ENST00000553942 NFATC2IPQ8NCF5 419 aa11.82□□□□□ -0.52
MARK3-207ENST00000553942 ZCRB1Q8TBF4 217 aaKnown RBP11.82□□□□□ -0.52
MARK3-207ENST00000553942 KAT6BQ8WYB5 2073 aa11.82□□□□□ -0.52
MARK3-207ENST00000553942 SPATA31A1Q5TZJ5 1347 aa11.82□□□□□ -0.52
MARK3-207ENST00000553942 COL14A1Q05707 1796 aaKnown RBP11.82□□□□□ -0.52
MARK3-207ENST00000553942 NCAPD2Q15021 1401 aa11.81□□□□□ -0.52
MARK3-207ENST00000553942 RCAN3Q9UKA8 241 aa11.81□□□□□ -0.52
MARK3-207ENST00000553942 SLIT2O94813 1529 aa11.81□□□□□ -0.52
MARK3-207ENST00000553942 C20orf194Q5TEA3 1177 aa11.81□□□□□ -0.52
MARK3-207ENST00000553942 SPATA31A6Q5VVP1 1343 aa11.81□□□□□ -0.52
MARK3-207ENST00000553942 RNMTO43148 476 aaKnown RBP11.8□□□□□ -0.52
MARK3-207ENST00000553942 PTF1AQ7RTS3 328 aa11.8□□□□□ -0.52
MARK3-207ENST00000553942 SYTL4Q96C24 671 aaPredicted RBP11.8□□□□□ -0.52
MARK3-207ENST00000553942 ACSBG1Q96GR2 724 aa11.8□□□□□ -0.52
MARK3-207ENST00000553942 TSPYL4Q9UJ04 414 aa11.8□□□□□ -0.52
MARK3-207ENST00000553942 KDM6AO15550 1401 aaPredicted RBP11.8□□□□□ -0.52
MARK3-207ENST00000553942 SRCAPQ6ZRS2 3230 aa11.8□□□□□ -0.52
MARK3-207ENST00000553942 PDE3BQ13370 1112 aa11.8□□□□□ -0.52
MARK3-207ENST00000553942 AKAP4Q5JQC9 854 aa11.8□□□□□ -0.52
MARK3-207ENST00000553942 IPO9Q96P70 1041 aaKnown RBP11.8□□□□□ -0.52
MARK3-207ENST00000553942 RTN4Q9NQC3 1192 aaKnown RBP11.8□□□□□ -0.52
MARK3-207ENST00000553942 GOLGB1Q14789 3259 aaKnown RBP11.8□□□□□ -0.52
MARK3-207ENST00000553942 SPATA31A5Q5VU36 1347 aa11.79□□□□□ -0.52
MARK3-207ENST00000553942 SPATA31A7Q8IWB4 1347 aa11.79□□□□□ -0.52
MARK3-207ENST00000553942 FNBP4Q8N3X1 1017 aaPredicted RBP11.79□□□□□ -0.52
MARK3-207ENST00000553942 CFAP44Q96MT7 982 aa11.79□□□□□ -0.52
MARK3-207ENST00000553942 SPG7Q9UQ90 795 aa11.79□□□□□ -0.52
MARK3-207ENST00000553942 ZNF853P0CG23 659 aa11.79□□□□□ -0.52
MARK3-207ENST00000553942 PIP4K2AP48426 406 aaPredicted RBP11.79□□□□□ -0.52
MARK3-207ENST00000553942 GLIPR1L2Q4G1C9 344 aa11.79□□□□□ -0.52
MARK3-207ENST00000553942 AMOTQ4VCS5 1084 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms