RNA–Protein interactions for RNA: ENST00000553829.1

LINC01578-201, Transcript of long intergenic non-protein coding RNA 1578, humanhuman

TSL 2 BASIC

Gene LINC01578, Length 732 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01578-201ENST00000553829 SHANK3Q9BYB0 1731 aa39.57■■■■□ 3.92
LINC01578-201ENST00000553829 KCNQ2O43526 872 aa39.56■■■■□ 3.92
LINC01578-201ENST00000553829 EYA1Q99502 592 aa39.56■■■■□ 3.92
LINC01578-201ENST00000553829 RGPD3A6NKT7 1758 aaPredicted RBP39.55■■■■□ 3.92
LINC01578-201ENST00000553829 RGPD4Q7Z3J3 1758 aa39.55■■■■□ 3.92
LINC01578-201ENST00000553829 NCAPD2Q15021 1401 aa39.55■■■■□ 3.92
LINC01578-201ENST00000553829 NHSQ6T4R5 1651 aa39.54■■■■□ 3.92
LINC01578-201ENST00000553829 EIF4A2Q14240 407 aaKnown RBP39.54■■■■□ 3.92
LINC01578-201ENST00000553829 ACSBG1Q96GR2 724 aa39.54■■■■□ 3.92
LINC01578-201ENST00000553829 NUP188Q5SRE5 1749 aa39.48■■■■□ 3.91
LINC01578-201ENST00000553829 NPC1L1Q9UHC9 1359 aa39.48■■■■□ 3.91
LINC01578-201ENST00000553829 CC2D1BQ5T0F9 858 aaKnown RBP39.48■■■■□ 3.91
LINC01578-201ENST00000553829 PSDA5PKW4 1024 aaPredicted RBP39.44■■■■□ 3.9
LINC01578-201ENST00000553829 PROM2Q8N271 834 aa39.44■■■■□ 3.9
LINC01578-201ENST00000553829 BTAF1O14981 1849 aa39.44■■■■□ 3.9
LINC01578-201ENST00000553829 NBPF14Q5TI25 921 aa39.42■■■■□ 3.9
LINC01578-201ENST00000553829 SRCAPQ6ZRS2 3230 aa39.42■■■■□ 3.9
LINC01578-201ENST00000553829 R3HDM1Q15032 1099 aaKnown RBP39.41■■■■□ 3.9
LINC01578-201ENST00000553829 PCDH11XQ9BZA7 1347 aa39.4■■■■□ 3.9
LINC01578-201ENST00000553829 PCDH11YQ9BZA8 1340 aa39.4■■■■□ 3.9
LINC01578-201ENST00000553829 PKD1L3Q7Z443 1732 aa39.4■■■■□ 3.9
LINC01578-201ENST00000553829 IGSF1Q8N6C5 1336 aa39.4■■■■□ 3.9
LINC01578-201ENST00000553829 PRIM1P49642 420 aaKnown RBP39.38■■■■□ 3.89
LINC01578-201ENST00000553829 MTHFSP49914 203 aa39.38■■■■□ 3.89
LINC01578-201ENST00000553829 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP39.38■■■■□ 3.89
LINC01578-201ENST00000553829 DOT1LQ8TEK3 1739 aa39.37■■■■□ 3.89
LINC01578-201ENST00000553829 TXNRD1Q16881 649 aa39.37■■■■□ 3.89
LINC01578-201ENST00000553829 SPG7Q9UQ90 795 aa39.37■■■■□ 3.89
LINC01578-201ENST00000553829 CYP27B1O15528 508 aa39.36■■■■□ 3.89
LINC01578-201ENST00000553829 IL13P35225 146 aa39.33■■■■□ 3.89
LINC01578-201ENST00000553829 SYTL4Q96C24 671 aaPredicted RBP39.33■■■■□ 3.89
LINC01578-201ENST00000553829 CNGB1Q14028 1251 aaPredicted RBP39.31■■■■□ 3.88
LINC01578-201ENST00000553829 PLEKHG2Q9H7P9 1386 aa39.31■■■■□ 3.88
LINC01578-201ENST00000553829 NKX1-1Q15270 411 aaPredicted RBP39.28■■■■□ 3.88
LINC01578-201ENST00000553829 IFNL2Q8IZJ0 200 aa39.24■■■■□ 3.87
LINC01578-201ENST00000553829 AEBP1Q8IUX7 1158 aa39.23■■■■□ 3.87
LINC01578-201ENST00000553829 ANO8Q9HCE9 1232 aaPredicted RBP39.23■■■■□ 3.87
LINC01578-201ENST00000553829 ITGB4P16144 1822 aa39.23■■■■□ 3.87
LINC01578-201ENST00000553829 SULT6B1Q6IMI4 303 aa39.22■■■■□ 3.87
LINC01578-201ENST00000553829 PHKG2P15735 406 aa39.21■■■■□ 3.87
LINC01578-201ENST00000553829 KDRP35968 1356 aa39.21■■■■□ 3.87
LINC01578-201ENST00000553829 PLEKHO1Q53GL0 409 aaPredicted RBP39.2■■■■□ 3.87
LINC01578-201ENST00000553829 DIAPH1O60610 1272 aaKnown RBP39.19■■■■□ 3.86
LINC01578-201ENST00000553829 TOGARAM1Q9Y4F4 1720 aa39.19■■■■□ 3.86
LINC01578-201ENST00000553829 LY75O60449 1722 aa39.18■■■■□ 3.86
LINC01578-201ENST00000553829 AMOTQ4VCS5 1084 aa39.18■■■■□ 3.86
LINC01578-201ENST00000553829 SLC27A3Q5K4L6 730 aa39.18■■■■□ 3.86
LINC01578-201ENST00000553829 LRRC4BQ9NT99 713 aa39.17■■■■□ 3.86
LINC01578-201ENST00000553829 MPRIPQ6WCQ1 1025 aa39.16■■■■□ 3.86
LINC01578-201ENST00000553829 STK32BQ9NY57 414 aa39.16■■■■□ 3.86
LINC01578-201ENST00000553829 LRP5O75197 1615 aa39.15■■■■□ 3.86
LINC01578-201ENST00000553829 SLC15A2Q16348 729 aa39.15■■■■□ 3.86
LINC01578-201ENST00000553829 PAPPAQ13219 1627 aa39.11■■■■□ 3.85
LINC01578-201ENST00000553829 ZEB1P37275 1124 aaPredicted RBP39.1■■■■□ 3.85
LINC01578-201ENST00000553829 COL3A1P02461 1466 aaPredicted RBP39.1■■■■□ 3.85
LINC01578-201ENST00000553829 PIGBQ92521 554 aa39.09■■■■□ 3.85
LINC01578-201ENST00000553829 HSP90AB1P08238 724 aaKnown RBP39.08■■■■□ 3.85
LINC01578-201ENST00000553829 PPP2R1AP30153 589 aa39.08■■■■□ 3.85
LINC01578-201ENST00000553829 ZNF530Q6P9A1 599 aaPredicted RBP39.08■■■■□ 3.85
LINC01578-201ENST00000553829 HMOX1P09601 288 aa39.07■■■■□ 3.85
LINC01578-201ENST00000553829 DCAF5Q96JK2 942 aa39.05■■■■□ 3.84
LINC01578-201ENST00000553829 CASZ1Q86V15 1759 aa39.04■■■■□ 3.84
LINC01578-201ENST00000553829 KCNQ4P56696 695 aa39.04■■■■□ 3.84
LINC01578-201ENST00000553829 SMARCC1Q92922 1105 aaPredicted RBP39.04■■■■□ 3.84
LINC01578-201ENST00000553829 CFAP53Q96M91 514 aa39.04■■■■□ 3.84
LINC01578-201ENST00000553829 TMOD3Q9NYL9 352 aa39.04■■■■□ 3.84
LINC01578-201ENST00000553829 CCNL1Q9UK58 526 aaPredicted RBP39.04■■■■□ 3.84
LINC01578-201ENST00000553829 ERVV-2B6SEH9 535 aa39.03■■■■□ 3.84
LINC01578-201ENST00000553829 C1orf141Q5JVX7 400 aa39.02■■■■□ 3.84
LINC01578-201ENST00000553829 PDGFDQ9GZP0 370 aaPredicted RBP39.02■■■■□ 3.84
LINC01578-201ENST00000553829 AKT1S1Q96B36 256 aa39.01■■■■□ 3.84
LINC01578-201ENST00000553829 PALLDQ8WX93 1383 aa39■■■■□ 3.83
LINC01578-201ENST00000553829 ZNF827Q17R98 1081 aa39■■■■□ 3.83
LINC01578-201ENST00000553829 U2SURPO15042 1029 aaKnown RBP38.99■■■■□ 3.83
LINC01578-201ENST00000553829 DDX10Q13206 875 aaKnown RBP38.98■■■■□ 3.83
LINC01578-201ENST00000553829 SPON1Q9HCB6 807 aa38.98■■■■□ 3.83
LINC01578-201ENST00000553829 HMGB2P26583 209 aaKnown RBP38.96■■■■□ 3.83
LINC01578-201ENST00000553829 KDM6AO15550 1401 aaPredicted RBP38.96■■■■□ 3.83
LINC01578-201ENST00000553829 QSER1Q2KHR3 1735 aa38.94■■■■□ 3.82
LINC01578-201ENST00000553829 TAF1LQ8IZX4 1826 aa38.94■■■■□ 3.82
LINC01578-201ENST00000553829 AKAP4Q5JQC9 854 aa38.94■■■■□ 3.82
LINC01578-201ENST00000553829 ASAP1Q9ULH1 1129 aa38.94■■■■□ 3.82
LINC01578-201ENST00000553829 NUDCQ9Y266 331 aa38.93■■■■□ 3.82
LINC01578-201ENST00000553829 SCN11AQ9UI33 1791 aa38.92■■■■□ 3.82
LINC01578-201ENST00000553829 MTHFSDQ2M296 383 aaKnown RBP38.91■■■■□ 3.82
LINC01578-201ENST00000553829 ATG3Q9NT62 314 aa38.91■■■■□ 3.82
LINC01578-201ENST00000553829 C5P01031 1676 aa38.9■■■■□ 3.82
LINC01578-201ENST00000553829 CABP4P57796 275 aa38.9■■■■□ 3.82
LINC01578-201ENST00000553829 TFCP2L1Q9NZI6 479 aa38.89■■■■□ 3.82
LINC01578-201ENST00000553829 VIRMAQ69YN4 1812 aaKnown RBP38.89■■■■□ 3.82
LINC01578-201ENST00000553829 TUBGCP6Q96RT7 1819 aa38.89■■■■□ 3.82
LINC01578-201ENST00000553829 ZBTB7AO95365 584 aa38.88■■■■□ 3.81
LINC01578-201ENST00000553829 LOC102724428A0A0B4J2F2 783 aa38.87■■■■□ 3.81
LINC01578-201ENST00000553829 SIK1P57059 783 aa38.87■■■■□ 3.81
LINC01578-201ENST00000553829 NFATC2IPQ8NCF5 419 aa38.85■■■■□ 3.81
LINC01578-201ENST00000553829 MTFR1LQ9H019 292 aa38.84■■■■□ 3.81
LINC01578-201ENST00000553829 PNPLA7Q6ZV29 1317 aa38.84■■■■□ 3.81
LINC01578-201ENST00000553829 LGR6Q9HBX8 967 aa38.83■■■■□ 3.81
LINC01578-201ENST00000553829 ATF5Q9Y2D1 282 aaPredicted RBP38.83■■■■□ 3.81
LINC01578-201ENST00000553829 RALBP1Q15311 655 aa38.82■■■■□ 3.8
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms