RNA–Protein interactions for RNA: ENST00000553807.1

XRCC3-205, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 2

Gene XRCC3, Length 568 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-205ENST00000553807 ZCRB1Q8TBF4 217 aaKnown RBP27.81■■■□□ 2.04
XRCC3-205ENST00000553807 ACSBG1Q96GR2 724 aa27.81■■■□□ 2.04
XRCC3-205ENST00000553807 PARD3Q8TEW0 1356 aa27.81■■■□□ 2.04
XRCC3-205ENST00000553807 NCAPD2Q15021 1401 aa27.79■■■□□ 2.04
XRCC3-205ENST00000553807 EYA1Q99502 592 aa27.79■■■□□ 2.04
XRCC3-205ENST00000553807 RREB1Q92766 1687 aa27.78■■■□□ 2.04
XRCC3-205ENST00000553807 KCNQ2O43526 872 aa27.77■■■□□ 2.04
XRCC3-205ENST00000553807 RGPD3A6NKT7 1758 aaPredicted RBP27.76■■■□□ 2.03
XRCC3-205ENST00000553807 RGPD4Q7Z3J3 1758 aa27.76■■■□□ 2.03
XRCC3-205ENST00000553807 NUP188Q5SRE5 1749 aa27.75■■■□□ 2.03
XRCC3-205ENST00000553807 NPC1L1Q9UHC9 1359 aa27.75■■■□□ 2.03
XRCC3-205ENST00000553807 DOT1LQ8TEK3 1739 aa27.74■■■□□ 2.03
XRCC3-205ENST00000553807 PKD1L3Q7Z443 1732 aa27.72■■■□□ 2.03
XRCC3-205ENST00000553807 PCDH11XQ9BZA7 1347 aa27.72■■■□□ 2.03
XRCC3-205ENST00000553807 PCDH11YQ9BZA8 1340 aa27.72■■■□□ 2.03
XRCC3-205ENST00000553807 PSDA5PKW4 1024 aaPredicted RBP27.71■■■□□ 2.03
XRCC3-205ENST00000553807 BTAF1O14981 1849 aa27.71■■■□□ 2.03
XRCC3-205ENST00000553807 IGSF1Q8N6C5 1336 aa27.7■■■□□ 2.03
XRCC3-205ENST00000553807 MTHFSP49914 203 aa27.7■■■□□ 2.02
XRCC3-205ENST00000553807 KAT6BQ8WYB5 2073 aa27.7■■■□□ 2.02
XRCC3-205ENST00000553807 PLSCR1O15162 318 aa27.69■■■□□ 2.02
XRCC3-205ENST00000553807 SYTL4Q96C24 671 aaPredicted RBP27.69■■■□□ 2.02
XRCC3-205ENST00000553807 R3HDM1Q15032 1099 aaKnown RBP27.66■■■□□ 2.02
XRCC3-205ENST00000553807 SPG7Q9UQ90 795 aa27.66■■■□□ 2.02
XRCC3-205ENST00000553807 CYP27B1O15528 508 aa27.65■■■□□ 2.02
XRCC3-205ENST00000553807 IL13P35225 146 aa27.64■■■□□ 2.02
XRCC3-205ENST00000553807 PRIM1P49642 420 aaKnown RBP27.64■■■□□ 2.02
XRCC3-205ENST00000553807 AEBP1Q8IUX7 1158 aa27.63■■■□□ 2.01
XRCC3-205ENST00000553807 TXNRD1Q16881 649 aa27.62■■■□□ 2.01
XRCC3-205ENST00000553807 NBPF14Q5TI25 921 aa27.62■■■□□ 2.01
XRCC3-205ENST00000553807 TOGARAM1Q9Y4F4 1720 aa27.61■■■□□ 2.01
XRCC3-205ENST00000553807 ZEB1P37275 1124 aaPredicted RBP27.6■■■□□ 2.01
XRCC3-205ENST00000553807 SULT6B1Q6IMI4 303 aa27.6■■■□□ 2.01
XRCC3-205ENST00000553807 PROM2Q8N271 834 aa27.6■■■□□ 2.01
XRCC3-205ENST00000553807 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP27.6■■■□□ 2.01
XRCC3-205ENST00000553807 PLEKHG2Q9H7P9 1386 aa27.58■■■□□ 2.01
XRCC3-205ENST00000553807 COL3A1P02461 1466 aaPredicted RBP27.57■■■□□ 2
XRCC3-205ENST00000553807 DIAPH1O60610 1272 aaKnown RBP27.57■■■□□ 2
XRCC3-205ENST00000553807 ANO8Q9HCE9 1232 aaPredicted RBP27.57■■■□□ 2
XRCC3-205ENST00000553807 KDRP35968 1356 aa27.56■■■□□ 2
XRCC3-205ENST00000553807 PHKG2P15735 406 aa27.55■■■□□ 2
XRCC3-205ENST00000553807 IFNL2Q8IZJ0 200 aa27.55■■■□□ 2
XRCC3-205ENST00000553807 PLEKHO1Q53GL0 409 aaPredicted RBP27.54■■■□□ 2
XRCC3-205ENST00000553807 SRCAPQ6ZRS2 3230 aa27.52■■■□□ 2
XRCC3-205ENST00000553807 HMOX1P09601 288 aa27.52■■■□□ 2
XRCC3-205ENST00000553807 PPP2R1AP30153 589 aa27.52■■■□□ 2
XRCC3-205ENST00000553807 NKX1-1Q15270 411 aaPredicted RBP27.52■■■□□ 2
XRCC3-205ENST00000553807 ZNF530Q6P9A1 599 aaPredicted RBP27.52■■■□□ 2
XRCC3-205ENST00000553807 MPRIPQ6WCQ1 1025 aa27.52■■■□□ 2
XRCC3-205ENST00000553807 ITGB4P16144 1822 aa27.51■■□□□ 1.99
XRCC3-205ENST00000553807 PAPPAQ13219 1627 aa27.5■■□□□ 1.99
XRCC3-205ENST00000553807 AMOTQ4VCS5 1084 aa27.5■■□□□ 1.99
XRCC3-205ENST00000553807 CFAP53Q96M91 514 aa27.5■■□□□ 1.99
XRCC3-205ENST00000553807 STK32BQ9NY57 414 aa27.5■■□□□ 1.99
XRCC3-205ENST00000553807 LY75O60449 1722 aa27.5■■□□□ 1.99
XRCC3-205ENST00000553807 U2SURPO15042 1029 aaKnown RBP27.49■■□□□ 1.99
XRCC3-205ENST00000553807 DDX10Q13206 875 aaKnown RBP27.49■■□□□ 1.99
XRCC3-205ENST00000553807 LRRC4BQ9NT99 713 aa27.48■■□□□ 1.99
XRCC3-205ENST00000553807 LRP5O75197 1615 aa27.48■■□□□ 1.99
XRCC3-205ENST00000553807 KCNQ4P56696 695 aa27.46■■□□□ 1.99
XRCC3-205ENST00000553807 C1orf141Q5JVX7 400 aa27.46■■□□□ 1.99
XRCC3-205ENST00000553807 SLC27A3Q5K4L6 730 aa27.46■■□□□ 1.99
XRCC3-205ENST00000553807 TMOD3Q9NYL9 352 aa27.45■■□□□ 1.98
XRCC3-205ENST00000553807 PALLDQ8WX93 1383 aa27.45■■□□□ 1.98
XRCC3-205ENST00000553807 KDM6AO15550 1401 aaPredicted RBP27.44■■□□□ 1.98
XRCC3-205ENST00000553807 HSP90AB1P08238 724 aaKnown RBP27.44■■□□□ 1.98
XRCC3-205ENST00000553807 SLC15A2Q16348 729 aa27.44■■□□□ 1.98
XRCC3-205ENST00000553807 PIGBQ92521 554 aa27.44■■□□□ 1.98
XRCC3-205ENST00000553807 CCNL1Q9UK58 526 aaPredicted RBP27.44■■□□□ 1.98
XRCC3-205ENST00000553807 ZNF827Q17R98 1081 aa27.42■■□□□ 1.98
XRCC3-205ENST00000553807 DCAF5Q96JK2 942 aa27.42■■□□□ 1.98
XRCC3-205ENST00000553807 CASZ1Q86V15 1759 aa27.41■■□□□ 1.98
XRCC3-205ENST00000553807 SMARCC1Q92922 1105 aaPredicted RBP27.39■■□□□ 1.98
XRCC3-205ENST00000553807 PDGFDQ9GZP0 370 aaPredicted RBP27.38■■□□□ 1.97
XRCC3-205ENST00000553807 NUDCQ9Y266 331 aa27.38■■□□□ 1.97
XRCC3-205ENST00000553807 ERVV-2B6SEH9 535 aa27.37■■□□□ 1.97
XRCC3-205ENST00000553807 C5P01031 1676 aa27.36■■□□□ 1.97
XRCC3-205ENST00000553807 AKAP4Q5JQC9 854 aa27.36■■□□□ 1.97
XRCC3-205ENST00000553807 CABP4P57796 275 aa27.35■■□□□ 1.97
XRCC3-205ENST00000553807 MTHFSDQ2M296 383 aaKnown RBP27.35■■□□□ 1.97
XRCC3-205ENST00000553807 AKT1S1Q96B36 256 aa27.35■■□□□ 1.97
XRCC3-205ENST00000553807 ASAP1Q9ULH1 1129 aa27.35■■□□□ 1.97
XRCC3-205ENST00000553807 U2AF1L5P0DN76 240 aaPredicted RBP27.34■■□□□ 1.97
XRCC3-205ENST00000553807 U2AF1Q01081 240 aaKnown RBP eCLIP27.34■■□□□ 1.97
XRCC3-205ENST00000553807 SCN11AQ9UI33 1791 aa27.33■■□□□ 1.97
XRCC3-205ENST00000553807 TUBGCP6Q96RT7 1819 aa27.32■■□□□ 1.96
XRCC3-205ENST00000553807 ZBTB7AO95365 584 aa27.32■■□□□ 1.96
XRCC3-205ENST00000553807 PRKAR2BP31323 418 aa27.32■■□□□ 1.96
XRCC3-205ENST00000553807 RALBP1Q15311 655 aa27.32■■□□□ 1.96
XRCC3-205ENST00000553807 ATG3Q9NT62 314 aa27.32■■□□□ 1.96
XRCC3-205ENST00000553807 TFCP2L1Q9NZI6 479 aa27.32■■□□□ 1.96
XRCC3-205ENST00000553807 RSPH6AQ9H0K4 717 aa27.31■■□□□ 1.96
XRCC3-205ENST00000553807 SPON1Q9HCB6 807 aa27.31■■□□□ 1.96
XRCC3-205ENST00000553807 TAF1LQ8IZX4 1826 aa27.3■■□□□ 1.96
XRCC3-205ENST00000553807 LOC102724428A0A0B4J2F2 783 aa27.3■■□□□ 1.96
XRCC3-205ENST00000553807 SIK1P57059 783 aa27.3■■□□□ 1.96
XRCC3-205ENST00000553807 QSER1Q2KHR3 1735 aa27.3■■□□□ 1.96
XRCC3-205ENST00000553807 NFATC2IPQ8NCF5 419 aa27.28■■□□□ 1.96
XRCC3-205ENST00000553807 GAS2L2Q8NHY3 880 aa27.28■■□□□ 1.96
XRCC3-205ENST00000553807 VIRMAQ69YN4 1812 aaKnown RBP27.27■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms