RNA–Protein interactions for RNA: ENST00000553727.1

SV2B-204, Transcript of synaptic vesicle glycoprotein 2B, humanhuman

TSL 4

Gene SV2B, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SV2B-204ENST00000553727 MYBBP1AQ9BQG0 1328 aaKnown RBP19.15■□□□□ 0.66
SV2B-204ENST00000553727 OVOS2A0A0G2JMS6 1433 aa19.15■□□□□ 0.66
SV2B-204ENST00000553727 NUDCQ9Y266 331 aa19.14■□□□□ 0.65
SV2B-204ENST00000553727 NCAPD2Q15021 1401 aa19.14■□□□□ 0.65
SV2B-204ENST00000553727 SPG7Q9UQ90 795 aa19.13■□□□□ 0.65
SV2B-204ENST00000553727 COL3A1P02461 1466 aaPredicted RBP19.13■□□□□ 0.65
SV2B-204ENST00000553727 TRIM37O94972 964 aa19.12■□□□□ 0.65
SV2B-204ENST00000553727 SF3B2Q13435 895 aaKnown RBP19.12■□□□□ 0.65
SV2B-204ENST00000553727 ANP32CO43423 234 aa19.11■□□□□ 0.65
SV2B-204ENST00000553727 U2AF1L5P0DN76 240 aaPredicted RBP19.1■□□□□ 0.65
SV2B-204ENST00000553727 U2AF1Q01081 240 aaKnown RBP eCLIP19.1■□□□□ 0.65
SV2B-204ENST00000553727 CCDC125Q86Z20 511 aa19.1■□□□□ 0.65
SV2B-204ENST00000553727 PCDH11XQ9BZA7 1347 aa19.09■□□□□ 0.65
SV2B-204ENST00000553727 PCDH11YQ9BZA8 1340 aa19.09■□□□□ 0.65
SV2B-204ENST00000553727 PLEKHO1Q53GL0 409 aaPredicted RBP19.09■□□□□ 0.65
SV2B-204ENST00000553727 ACSBG1Q96GR2 724 aa19.09■□□□□ 0.65
SV2B-204ENST00000553727 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.09■□□□□ 0.65
SV2B-204ENST00000553727 KDRP35968 1356 aa19.08■□□□□ 0.65
SV2B-204ENST00000553727 CYP27B1O15528 508 aa19.07■□□□□ 0.64
SV2B-204ENST00000553727 AMOTQ4VCS5 1084 aa19.07■□□□□ 0.64
SV2B-204ENST00000553727 RGPD1P0DJD0 1748 aa19.06■□□□□ 0.64
SV2B-204ENST00000553727 KCNQ2O43526 872 aa19.05■□□□□ 0.64
SV2B-204ENST00000553727 APBA3O96018 575 aa19.05■□□□□ 0.64
SV2B-204ENST00000553727 ZNF530Q6P9A1 599 aaPredicted RBP19.05■□□□□ 0.64
SV2B-204ENST00000553727 IFNL2Q8IZJ0 200 aa19.05■□□□□ 0.64
SV2B-204ENST00000553727 SYTL4Q96C24 671 aaPredicted RBP19.05■□□□□ 0.64
SV2B-204ENST00000553727 BCL9O00512 1426 aa19.04■□□□□ 0.64
SV2B-204ENST00000553727 PTF1AQ7RTS3 328 aa19.04■□□□□ 0.64
SV2B-204ENST00000553727 DEFB132Q7Z7B7 95 aa19.04■□□□□ 0.64
SV2B-204ENST00000553727 BCL11BQ9C0K0 894 aaPredicted RBP19.04■□□□□ 0.64
SV2B-204ENST00000553727 PHKG2P15735 406 aa19.03■□□□□ 0.64
SV2B-204ENST00000553727 PRKAR2BP31323 418 aa19.03■□□□□ 0.64
SV2B-204ENST00000553727 BAG6P46379 1132 aa19.03■□□□□ 0.64
SV2B-204ENST00000553727 PRIM1P49642 420 aaKnown RBP19.03■□□□□ 0.64
SV2B-204ENST00000553727 C1orf141Q5JVX7 400 aa19.03■□□□□ 0.64
SV2B-204ENST00000553727 RSPH6AQ9H0K4 717 aa19.03■□□□□ 0.64
SV2B-204ENST00000553727 FCHSD2O94868 740 aa19.01■□□□□ 0.63
SV2B-204ENST00000553727 EN1Q05925 392 aaPredicted RBP19.01■□□□□ 0.63
SV2B-204ENST00000553727 PLEKHG2Q9H7P9 1386 aa19.01■□□□□ 0.63
SV2B-204ENST00000553727 SHANK3Q9BYB0 1731 aa19■□□□□ 0.63
SV2B-204ENST00000553727 NKX1-1Q15270 411 aaPredicted RBP19■□□□□ 0.63
SV2B-204ENST00000553727 MTHFSDQ2M296 383 aaKnown RBP19■□□□□ 0.63
SV2B-204ENST00000553727 PKD1L3Q7Z443 1732 aa19■□□□□ 0.63
SV2B-204ENST00000553727 HSP90AB1P08238 724 aaKnown RBP18.99■□□□□ 0.63
SV2B-204ENST00000553727 WDR43Q15061 677 aaKnown RBP eCLIP18.99■□□□□ 0.63
SV2B-204ENST00000553727 PHACTR3Q96KR7 559 aa18.99■□□□□ 0.63
SV2B-204ENST00000553727 NEFMP07197 916 aa18.98■□□□□ 0.63
SV2B-204ENST00000553727 CCDC184Q52MB2 194 aa18.97■□□□□ 0.63
SV2B-204ENST00000553727 AKAP4Q5JQC9 854 aa18.97■□□□□ 0.63
SV2B-204ENST00000553727 MPRIPQ6WCQ1 1025 aa18.97■□□□□ 0.63
SV2B-204ENST00000553727 EZH2Q15910 746 aaKnown RBP18.96■□□□□ 0.63
SV2B-204ENST00000553727 GAS2L2Q8NHY3 880 aa18.96■□□□□ 0.63
SV2B-204ENST00000553727 DCAF5Q96JK2 942 aa18.96■□□□□ 0.63
SV2B-204ENST00000553727 PNNQ9H307 717 aaKnown RBP18.96■□□□□ 0.63
SV2B-204ENST00000553727 MRS2Q9HD23 443 aa18.95■□□□□ 0.62
SV2B-204ENST00000553727 CAMKK2Q96RR4 588 aa18.94■□□□□ 0.62
SV2B-204ENST00000553727 ADAMTS8Q9UP79 889 aa18.94■□□□□ 0.62
SV2B-204ENST00000553727 SBF2Q86WG5 1849 aa18.94■□□□□ 0.62
SV2B-204ENST00000553727 EP400Q96L91 3159 aa18.94■□□□□ 0.62
SV2B-204ENST00000553727 PLSCR1O15162 318 aa18.93■□□□□ 0.62
SV2B-204ENST00000553727 CABP4P57796 275 aa18.93■□□□□ 0.62
SV2B-204ENST00000553727 TMOD3Q9NYL9 352 aa18.93■□□□□ 0.62
SV2B-204ENST00000553727 TNS1Q9HBL0 1735 aaKnown RBP18.93■□□□□ 0.62
SV2B-204ENST00000553727 MAPK8IP3Q9UPT6 1336 aa18.93■□□□□ 0.62
SV2B-204ENST00000553727 NHSQ6T4R5 1651 aa18.92■□□□□ 0.62
SV2B-204ENST00000553727 DOT1LQ8TEK3 1739 aa18.92■□□□□ 0.62
SV2B-204ENST00000553727 GNAT3A8MTJ3 354 aa18.92■□□□□ 0.62
SV2B-204ENST00000553727 ERVV-2B6SEH9 535 aa18.92■□□□□ 0.62
SV2B-204ENST00000553727 PIGBQ92521 554 aa18.92■□□□□ 0.62
SV2B-204ENST00000553727 PLEKHF1Q96S99 279 aa18.92■□□□□ 0.62
SV2B-204ENST00000553727 LGR6Q9HBX8 967 aa18.92■□□□□ 0.62
SV2B-204ENST00000553727 KAT6BQ8WYB5 2073 aa18.91■□□□□ 0.62
SV2B-204ENST00000553727 DIEXFQ68CQ4 756 aaKnown RBP18.91■□□□□ 0.62
SV2B-204ENST00000553727 CCDC146Q8IYE0 955 aa18.91■□□□□ 0.62
SV2B-204ENST00000553727 KDM6AO15550 1401 aaPredicted RBP18.91■□□□□ 0.62
SV2B-204ENST00000553727 RNMTO43148 476 aaKnown RBP18.9■□□□□ 0.62
SV2B-204ENST00000553727 MAP3K5Q99683 1374 aa18.9■□□□□ 0.62
SV2B-204ENST00000553727 TXNRD1Q16881 649 aa18.89■□□□□ 0.61
SV2B-204ENST00000553727 NFATC2IPQ8NCF5 419 aa18.89■□□□□ 0.61
SV2B-204ENST00000553727 PROM2Q8N271 834 aa18.88■□□□□ 0.61
SV2B-204ENST00000553727 RTF1Q92541 710 aaKnown RBP18.88■□□□□ 0.61
SV2B-204ENST00000553727 IL17REQ8NFR9 667 aa18.87■□□□□ 0.61
SV2B-204ENST00000553727 RUNDC1Q96C34 613 aa18.87■□□□□ 0.61
SV2B-204ENST00000553727 TOGARAM1Q9Y4F4 1720 aa18.87■□□□□ 0.61
SV2B-204ENST00000553727 BTAF1O14981 1849 aa18.86■□□□□ 0.61
SV2B-204ENST00000553727 NFE2L2Q16236 605 aa18.86■□□□□ 0.61
SV2B-204ENST00000553727 PNISRQ8TF01 805 aaKnown RBP18.86■□□□□ 0.61
SV2B-204ENST00000553727 SMARCC1Q92922 1105 aaPredicted RBP18.86■□□□□ 0.61
SV2B-204ENST00000553727 SLC52A2Q9HAB3 445 aa18.86■□□□□ 0.61
SV2B-204ENST00000553727 ASAP1Q9ULH1 1129 aa18.86■□□□□ 0.61
SV2B-204ENST00000553727 PALLDQ8WX93 1383 aa18.84■□□□□ 0.61
SV2B-204ENST00000553727 KCNQ4P56696 695 aa18.84■□□□□ 0.61
SV2B-204ENST00000553727 TEFQ10587 303 aa18.84■□□□□ 0.61
SV2B-204ENST00000553727 DCTN1Q14203 1278 aa18.84■□□□□ 0.61
SV2B-204ENST00000553727 NEUROD2Q15784 382 aa18.84■□□□□ 0.61
SV2B-204ENST00000553727 MCM10Q7L590 875 aa18.84■□□□□ 0.61
SV2B-204ENST00000553727 ATG3Q9NT62 314 aa18.84■□□□□ 0.61
SV2B-204ENST00000553727 RRP7AQ9Y3A4 280 aaKnown RBP18.84■□□□□ 0.61
SV2B-204ENST00000553727 HTATSF1O43719 755 aaKnown RBP18.83■□□□□ 0.6
SV2B-204ENST00000553727 RIPK4P57078 832 aa18.83■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms