RNA–Protein interactions for RNA: ENST00000553617.5

TDP1-207, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 876 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-207ENST00000553617 RNF20Q5VTR2 975 aa6.48□□□□□ -1.37
TDP1-207ENST00000553617 CCDC102BQ68D86 513 aa6.48□□□□□ -1.37
TDP1-207ENST00000553617 Q6ZNB5 142 aa6.48□□□□□ -1.37
TDP1-207ENST00000553617 SEPT12Q8IYM1 358 aa6.48□□□□□ -1.37
TDP1-207ENST00000553617 IL21Q9HBE4 155 aa6.48□□□□□ -1.37
TDP1-207ENST00000553617 UNCXA6NJT0 531 aa6.47□□□□□ -1.37
TDP1-207ENST00000553617 S1PR4O95977 384 aa6.47□□□□□ -1.37
TDP1-207ENST00000553617 LINC01559Q495D7 138 aa6.47□□□□□ -1.37
TDP1-207ENST00000553617 CCDC125Q86Z20 511 aa6.47□□□□□ -1.37
TDP1-207ENST00000553617 SLC10A4Q96EP9 437 aa6.47□□□□□ -1.37
TDP1-207ENST00000553617 EGFL7Q9UHF1 273 aa6.47□□□□□ -1.37
TDP1-207ENST00000553617 SFI1A8K8P3 1242 aa6.46□□□□□ -1.38
TDP1-207ENST00000553617 PRMT3O60678 531 aa6.46□□□□□ -1.38
TDP1-207ENST00000553617 NBPF20Q3BBV1 942 aa6.46□□□□□ -1.38
TDP1-207ENST00000553617 TPCN2Q8NHX9 752 aa6.46□□□□□ -1.38
TDP1-207ENST00000553617 CDV3Q9UKY7 258 aaKnown RBP6.46□□□□□ -1.38
TDP1-207ENST00000553617 FCF1Q9Y324 198 aaKnown RBP6.46□□□□□ -1.38
TDP1-207ENST00000553617 M0R2N6 131 aa6.45□□□□□ -1.38
TDP1-207ENST00000553617 SH3BP2P78314 561 aa6.45□□□□□ -1.38
TDP1-207ENST00000553617 LAPTM4AQ15012 233 aa6.45□□□□□ -1.38
TDP1-207ENST00000553617 SIRT1Q96EB6 747 aa6.45□□□□□ -1.38
TDP1-207ENST00000553617 PPEF1O14829 653 aaPredicted RBP6.44□□□□□ -1.38
TDP1-207ENST00000553617 USP4Q13107 963 aa6.44□□□□□ -1.38
TDP1-207ENST00000553617 AGERQ15109 404 aa6.44□□□□□ -1.38
TDP1-207ENST00000553617 PRIMPOLQ96LW4 560 aa6.44□□□□□ -1.38
TDP1-207ENST00000553617 IGSF5Q9NSI5 407 aa6.44□□□□□ -1.38
TDP1-207ENST00000553617 PCDHB11Q9Y5F2 797 aa6.44□□□□□ -1.38
TDP1-207ENST00000553617 LCE2BO14633 110 aa6.43□□□□□ -1.38
TDP1-207ENST00000553617 WEE1P30291 646 aa6.43□□□□□ -1.38
TDP1-207ENST00000553617 MARSP56192 900 aaKnown RBP6.43□□□□□ -1.38
TDP1-207ENST00000553617 ICMTO60725 284 aa6.42□□□□□ -1.38
TDP1-207ENST00000553617 ECM1Q16610 540 aa6.42□□□□□ -1.38
TDP1-207ENST00000553617 PLA2G2CQ5R387 149 aa6.42□□□□□ -1.38
TDP1-207ENST00000553617 NPAS4Q8IUM7 802 aa6.42□□□□□ -1.38
TDP1-207ENST00000553617 RBM19Q9Y4C8 960 aaKnown RBP6.42□□□□□ -1.38
TDP1-207ENST00000553617 MAP4K5Q9Y4K4 846 aa6.42□□□□□ -1.38
TDP1-207ENST00000553617 GFRA3O60609 400 aa6.41□□□□□ -1.38
TDP1-207ENST00000553617 PSME1Q06323 249 aa6.41□□□□□ -1.38
TDP1-207ENST00000553617 ZNF211Q13398 564 aaPredicted RBP6.41□□□□□ -1.38
TDP1-207ENST00000553617 KCTD15Q96SI1 283 aaPredicted RBP6.41□□□□□ -1.38
TDP1-207ENST00000553617 PRKD2Q9BZL6 878 aa6.41□□□□□ -1.38
TDP1-207ENST00000553617 KIAA1522Q9P206 1035 aaPredicted RBP6.41□□□□□ -1.38
TDP1-207ENST00000553617 H3BRB1 525 aa6.4□□□□□ -1.38
TDP1-207ENST00000553617 C21orf2O43822 256 aa6.4□□□□□ -1.38
TDP1-207ENST00000553617 ZNF16P17020 682 aaPredicted RBP6.4□□□□□ -1.38
TDP1-207ENST00000553617 SCTRP47872 440 aa6.4□□□□□ -1.38
TDP1-207ENST00000553617 FKBP5Q13451 457 aaPredicted RBP6.4□□□□□ -1.38
TDP1-207ENST00000553617 INTS6LQ5JSJ4 861 aaKnown RBP6.4□□□□□ -1.38
TDP1-207ENST00000553617 TSEN2Q8NCE0 465 aaKnown RBP6.4□□□□□ -1.38
TDP1-207ENST00000553617 COL26A1Q96A83 441 aa6.4□□□□□ -1.38
TDP1-207ENST00000553617 TUT1Q9H6E5 874 aaKnown RBP6.4□□□□□ -1.38
TDP1-207ENST00000553617 BIN2Q9UBW5 565 aaPredicted RBP6.4□□□□□ -1.38
TDP1-207ENST00000553617 TMEM229AB2RXF0 380 aa6.39□□□□□ -1.39
TDP1-207ENST00000553617 LGR5O75473 907 aa6.39□□□□□ -1.39
TDP1-207ENST00000553617 ABL1P00519 1130 aa6.39□□□□□ -1.39
TDP1-207ENST00000553617 ERVK-9P63128 1117 aa6.39□□□□□ -1.39
TDP1-207ENST00000553617 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.39□□□□□ -1.39
TDP1-207ENST00000553617 GTF3C2Q8WUA4 911 aaPredicted RBP6.39□□□□□ -1.39
TDP1-207ENST00000553617 PURBQ96QR8 312 aaKnown RBP6.39□□□□□ -1.39
TDP1-207ENST00000553617 HINFPQ9BQA5 517 aa6.39□□□□□ -1.39
TDP1-207ENST00000553617 ZNF358Q9NW07 568 aa6.39□□□□□ -1.39
TDP1-207ENST00000553617 SEPT3Q9UH03 358 aa6.39□□□□□ -1.39
TDP1-207ENST00000553617 DNMT3AQ9Y6K1 912 aaPredicted RBP6.39□□□□□ -1.39
TDP1-207ENST00000553617 ANKRD33BA6NCL7 494 aa6.38□□□□□ -1.39
TDP1-207ENST00000553617 ERVH48-1M5A8F1 160 aa6.38□□□□□ -1.39
TDP1-207ENST00000553617 WASLO00401 505 aaPredicted RBP6.38□□□□□ -1.39
TDP1-207ENST00000553617 NRG2O14511 850 aaPredicted RBP6.38□□□□□ -1.39
TDP1-207ENST00000553617 IGSF3O75054 1194 aa6.38□□□□□ -1.39
TDP1-207ENST00000553617 MYCP01106 439 aaPredicted RBP6.38□□□□□ -1.39
TDP1-207ENST00000553617 VARSP26640 1264 aaKnown RBP6.38□□□□□ -1.39
TDP1-207ENST00000553617 SCNN1DP51172 638 aa6.38□□□□□ -1.39
TDP1-207ENST00000553617 WNT7BP56706 349 aa6.38□□□□□ -1.39
TDP1-207ENST00000553617 SKOR1P84550 965 aa6.38□□□□□ -1.39
TDP1-207ENST00000553617 ARHGAP4P98171 946 aa6.38□□□□□ -1.39
TDP1-207ENST00000553617 TRIM32Q13049 653 aa6.38□□□□□ -1.39
TDP1-207ENST00000553617 PPP1R18Q6NYC8 613 aa6.38□□□□□ -1.39
TDP1-207ENST00000553617 CAPN12Q6ZSI9 719 aa6.38□□□□□ -1.39
TDP1-207ENST00000553617 GLYCTKQ8IVS8 523 aa6.38□□□□□ -1.39
TDP1-207ENST00000553617 MRRFQ96E11 262 aaKnown RBP6.38□□□□□ -1.39
TDP1-207ENST00000553617 BCL2L13Q9BXK5 485 aa6.38□□□□□ -1.39
TDP1-207ENST00000553617 ANO2Q9NQ90 1003 aa6.38□□□□□ -1.39
TDP1-207ENST00000553617 V9GY48 417 aaPredicted RBP6.38□□□□□ -1.39
TDP1-207ENST00000553617 RNF223E7ERA6 249 aa6.37□□□□□ -1.39
TDP1-207ENST00000553617 FOXO3O43524 673 aa6.37□□□□□ -1.39
TDP1-207ENST00000553617 PTCD1O75127 700 aaKnown RBP6.37□□□□□ -1.39
TDP1-207ENST00000553617 IGFBP4P22692 258 aa6.37□□□□□ -1.39
TDP1-207ENST00000553617 EPHA4P54764 986 aa6.37□□□□□ -1.39
TDP1-207ENST00000553617 SF3B2Q13435 895 aaKnown RBP6.37□□□□□ -1.39
TDP1-207ENST00000553617 ASB16Q96NS5 453 aa6.37□□□□□ -1.39
TDP1-207ENST00000553617 OSBPL3Q9H4L5 887 aa6.37□□□□□ -1.39
TDP1-207ENST00000553617 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.37□□□□□ -1.39
TDP1-207ENST00000553617 NPR3P17342 541 aa6.36□□□□□ -1.39
TDP1-207ENST00000553617 FKBP4Q02790 459 aaKnown RBP eCLIP6.36□□□□□ -1.39
TDP1-207ENST00000553617 CC2D2BQ6DHV5 1058 aa6.36□□□□□ -1.39
TDP1-207ENST00000553617 FBXO33Q7Z6M2 555 aa6.36□□□□□ -1.39
TDP1-207ENST00000553617 ANKLE1Q8NAG6 615 aa6.36□□□□□ -1.39
TDP1-207ENST00000553617 GIPC2Q8TF65 315 aa6.36□□□□□ -1.39
TDP1-207ENST00000553617 CDK15Q96Q40 435 aa6.36□□□□□ -1.39
TDP1-207ENST00000553617 MKNK1Q9BUB5 465 aa6.36□□□□□ -1.39
TDP1-207ENST00000553617 ZBTB24O43167 697 aaPredicted RBP6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms