RNA–Protein interactions for RNA: ENST00000553602.1

TMEM55B-204, humanhuman

TSL 2

Gene TMEM55B, Length 382 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-204ENST00000553602 RRP7AQ9Y3A4 280 aaKnown RBP6.6□□□□□ -1.35
TMEM55B-204ENST00000553602 CPS1P31327 1500 aa6.6□□□□□ -1.35
TMEM55B-204ENST00000553602 ABCC4O15439 1325 aa6.59□□□□□ -1.35
TMEM55B-204ENST00000553602 FYB1O15117 783 aa6.59□□□□□ -1.35
TMEM55B-204ENST00000553602 DIAPH1O60610 1272 aaKnown RBP6.59□□□□□ -1.35
TMEM55B-204ENST00000553602 EXOSC9Q06265 439 aaKnown RBP6.59□□□□□ -1.35
TMEM55B-204ENST00000553602 LMOD3Q0VAK6 560 aa6.59□□□□□ -1.35
TMEM55B-204ENST00000553602 TMEM132EQ6IEE7 984 aa6.59□□□□□ -1.35
TMEM55B-204ENST00000553602 POGKQ9P215 609 aa6.59□□□□□ -1.35
TMEM55B-204ENST00000553602 TNNQ9UQP3 1299 aa6.59□□□□□ -1.35
TMEM55B-204ENST00000553602 C3P01024 1663 aa6.58□□□□□ -1.36
TMEM55B-204ENST00000553602 NCKAP5LQ9HCH0 1330 aa6.58□□□□□ -1.36
TMEM55B-204ENST00000553602 GOLGA6L3A6NEY3 463 aa6.58□□□□□ -1.36
TMEM55B-204ENST00000553602 MRE11P49959 708 aa6.58□□□□□ -1.36
TMEM55B-204ENST00000553602 NEUROD2Q15784 382 aa6.58□□□□□ -1.36
TMEM55B-204ENST00000553602 ITPRIPQ8IWB1 547 aa6.58□□□□□ -1.36
TMEM55B-204ENST00000553602 MS4A3Q96HJ5 214 aa6.58□□□□□ -1.36
TMEM55B-204ENST00000553602 LARP6Q9BRS8 491 aaKnown RBP6.58□□□□□ -1.36
TMEM55B-204ENST00000553602 BCL2L13Q9BXK5 485 aa6.58□□□□□ -1.36
TMEM55B-204ENST00000553602 SLKQ9H2G2 1235 aaPredicted RBP6.58□□□□□ -1.36
TMEM55B-204ENST00000553602 IFT57Q9NWB7 429 aa6.58□□□□□ -1.36
TMEM55B-204ENST00000553602 AKAP12Q02952 1782 aa6.58□□□□□ -1.36
TMEM55B-204ENST00000553602 A2ML1A8K2U0 1454 aa6.58□□□□□ -1.36
TMEM55B-204ENST00000553602 NRXN3Q9Y4C0 1643 aa6.58□□□□□ -1.36
TMEM55B-204ENST00000553602 ZNF853P0CG23 659 aa6.57□□□□□ -1.36
TMEM55B-204ENST00000553602 TNNT2P45379 298 aaPredicted RBP6.57□□□□□ -1.36
TMEM55B-204ENST00000553602 SRPK2P78362 688 aaKnown RBP6.57□□□□□ -1.36
TMEM55B-204ENST00000553602 IDI1Q13907 227 aa6.57□□□□□ -1.36
TMEM55B-204ENST00000553602 MFSD10Q14728 455 aa6.57□□□□□ -1.36
TMEM55B-204ENST00000553602 NFE2L2Q16236 605 aa6.57□□□□□ -1.36
TMEM55B-204ENST00000553602 SKOR2Q2VWA4 1001 aaPredicted RBP6.57□□□□□ -1.36
TMEM55B-204ENST00000553602 GGT6Q6P531 493 aa6.57□□□□□ -1.36
TMEM55B-204ENST00000553602 CHD1LQ86WJ1 897 aa6.57□□□□□ -1.36
TMEM55B-204ENST00000553602 TMEM57Q8N5G2 664 aa6.57□□□□□ -1.36
TMEM55B-204ENST00000553602 TSR2Q969E8 191 aaKnown RBP6.57□□□□□ -1.36
TMEM55B-204ENST00000553602 SIRT1Q96EB6 747 aa6.57□□□□□ -1.36
TMEM55B-204ENST00000553602 CRISPLD2Q9H0B8 497 aa6.57□□□□□ -1.36
TMEM55B-204ENST00000553602 NALCNQ8IZF0 1738 aa6.56□□□□□ -1.36
TMEM55B-204ENST00000553602 TOPAZ1Q8N9V7 1692 aa6.56□□□□□ -1.36
TMEM55B-204ENST00000553602 CLCN1P35523 988 aa6.56□□□□□ -1.36
TMEM55B-204ENST00000553602 TIE1P35590 1138 aa6.56□□□□□ -1.36
TMEM55B-204ENST00000553602 RIPK4P57078 832 aa6.56□□□□□ -1.36
TMEM55B-204ENST00000553602 GNAI1P63096 354 aa6.56□□□□□ -1.36
TMEM55B-204ENST00000553602 RAB3GAP1Q15042 981 aa6.56□□□□□ -1.36
TMEM55B-204ENST00000553602 DDX27Q96GQ7 796 aaKnown RBP6.56□□□□□ -1.36
TMEM55B-204ENST00000553602 GBP4Q96PP9 640 aa6.56□□□□□ -1.36
TMEM55B-204ENST00000553602 NOB1Q9ULX3 412 aaKnown RBP6.56□□□□□ -1.36
TMEM55B-204ENST00000553602 RIMS2Q9UQ26 1411 aa6.56□□□□□ -1.36
TMEM55B-204ENST00000553602 RGPD1P0DJD0 1748 aa6.56□□□□□ -1.36
TMEM55B-204ENST00000553602 ITSN1Q15811 1721 aa6.56□□□□□ -1.36
TMEM55B-204ENST00000553602 TESPA1A2RU30 521 aaPredicted RBP6.55□□□□□ -1.36
TMEM55B-204ENST00000553602 U2SURPO15042 1029 aaKnown RBP6.55□□□□□ -1.36
TMEM55B-204ENST00000553602 ZBTB7BO15156 539 aaPredicted RBP6.55□□□□□ -1.36
TMEM55B-204ENST00000553602 TRAK2O60296 914 aa6.55□□□□□ -1.36
TMEM55B-204ENST00000553602 MFAP1P55081 439 aaKnown RBP6.55□□□□□ -1.36
TMEM55B-204ENST00000553602 SMYD5Q6GMV2 418 aa6.55□□□□□ -1.36
TMEM55B-204ENST00000553602 PRAM1Q96QH2 718 aa6.55□□□□□ -1.36
TMEM55B-204ENST00000553602 API5Q9BZZ5 524 aaKnown RBP6.55□□□□□ -1.36
TMEM55B-204ENST00000553602 GGNBP2Q9H3C7 697 aa6.55□□□□□ -1.36
TMEM55B-204ENST00000553602 ANO8Q9HCE9 1232 aaPredicted RBP6.55□□□□□ -1.36
TMEM55B-204ENST00000553602 KIAA0232Q92628 1395 aa6.55□□□□□ -1.36
TMEM55B-204ENST00000553602 CFAP65Q6ZU64 1925 aaKnown RBP6.54□□□□□ -1.36
TMEM55B-204ENST00000553602 N4BP2Q86UW6 1770 aaPredicted RBP6.54□□□□□ -1.36
TMEM55B-204ENST00000553602 ATP10DQ9P241 1426 aa6.54□□□□□ -1.36
TMEM55B-204ENST00000553602 SEMA3EO15041 775 aa6.54□□□□□ -1.36
TMEM55B-204ENST00000553602 VAMP4O75379 141 aa6.54□□□□□ -1.36
TMEM55B-204ENST00000553602 CDC45O75419 566 aa6.54□□□□□ -1.36
TMEM55B-204ENST00000553602 XRCC6P12956 609 aaKnown RBP eCLIP6.54□□□□□ -1.36
TMEM55B-204ENST00000553602 CYB5RLQ6IPT4 315 aa6.54□□□□□ -1.36
TMEM55B-204ENST00000553602 MRPL50Q8N5N7 158 aaKnown RBP6.54□□□□□ -1.36
TMEM55B-204ENST00000553602 KIF2CQ99661 725 aa6.54□□□□□ -1.36
TMEM55B-204ENST00000553602 POLKQ9UBT6 870 aa6.54□□□□□ -1.36
TMEM55B-204ENST00000553602 TRPC6Q9Y210 931 aa6.54□□□□□ -1.36
TMEM55B-204ENST00000553602 ARIH1Q9Y4X5 557 aaPredicted RBP6.54□□□□□ -1.36
TMEM55B-204ENST00000553602 ARHGEF10O15013 1369 aa6.54□□□□□ -1.36
TMEM55B-204ENST00000553602 DIP2BQ9P265 1576 aa6.53□□□□□ -1.36
TMEM55B-204ENST00000553602 RGS12O14924 1447 aa6.53□□□□□ -1.36
TMEM55B-204ENST00000553602 DLG5Q8TDM6 1919 aa6.53□□□□□ -1.36
TMEM55B-204ENST00000553602 K7ELQ4 463 aaPredicted RBP6.53□□□□□ -1.36
TMEM55B-204ENST00000553602 PRKAR2BP31323 418 aa6.53□□□□□ -1.36
TMEM55B-204ENST00000553602 IL13P35225 146 aa6.53□□□□□ -1.36
TMEM55B-204ENST00000553602 RABEP1Q15276 862 aa6.53□□□□□ -1.36
TMEM55B-204ENST00000553602 INTS3Q68E01 1043 aaKnown RBP6.53□□□□□ -1.36
TMEM55B-204ENST00000553602 CDK19Q9BWU1 502 aa6.53□□□□□ -1.36
TMEM55B-204ENST00000553602 RTL1A6NKG5 1358 aa6.53□□□□□ -1.36
TMEM55B-204ENST00000553602 LRRC37A3O60309 1634 aa6.53□□□□□ -1.36
TMEM55B-204ENST00000553602 TSPOAP1O95153 1857 aa6.53□□□□□ -1.36
TMEM55B-204ENST00000553602 MAP2P11137 1827 aaKnown RBP6.53□□□□□ -1.36
TMEM55B-204ENST00000553602 MINK1Q8N4C8 1332 aaPredicted RBP6.52□□□□□ -1.37
TMEM55B-204ENST00000553602 RIMS1Q86UR5 1692 aaKnown RBP6.52□□□□□ -1.37
TMEM55B-204ENST00000553602 OVOS2A0A0J9YW53 1432 aa6.52□□□□□ -1.37
TMEM55B-204ENST00000553602 OVOS2Q6IE36 1432 aa6.52□□□□□ -1.37
TMEM55B-204ENST00000553602 TTLL13PA6NNM8 815 aa6.52□□□□□ -1.37
TMEM55B-204ENST00000553602 GABBR2O75899 941 aa6.52□□□□□ -1.37
TMEM55B-204ENST00000553602 HSP90AB1P08238 724 aaKnown RBP6.52□□□□□ -1.37
TMEM55B-204ENST00000553602 CAMK2BQ13554 666 aa6.52□□□□□ -1.37
TMEM55B-204ENST00000553602 TMEM132AQ24JP5 1023 aa6.52□□□□□ -1.37
TMEM55B-204ENST00000553602 TBC1D9Q6ZT07 1266 aa6.52□□□□□ -1.37
TMEM55B-204ENST00000553602 GRPEL1Q9HAV7 217 aa6.52□□□□□ -1.37
TMEM55B-204ENST00000553602 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms