RNA–Protein interactions for RNA: ENST00000553498.5

ATXN3-221, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 911 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-221ENST00000553498 ROBO2Q9HCK4 1378 aa9.61□□□□□ -0.87
ATXN3-221ENST00000553498 MYO5BQ9ULV0 1848 aa9.61□□□□□ -0.87
ATXN3-221ENST00000553498 CDC42BPGQ6DT37 1551 aa9.6□□□□□ -0.87
ATXN3-221ENST00000553498 PPIP5K1Q6PFW1 1433 aa9.6□□□□□ -0.87
ATXN3-221ENST00000553498 PLEKHG3A1L390 1219 aa9.6□□□□□ -0.87
ATXN3-221ENST00000553498 PTGER2P43116 358 aa9.6□□□□□ -0.87
ATXN3-221ENST00000553498 CCDC27Q2M243 656 aa9.6□□□□□ -0.87
ATXN3-221ENST00000553498 PPP4R3BQ5MIZ7 849 aa9.6□□□□□ -0.87
ATXN3-221ENST00000553498 ANKLE2Q86XL3 938 aa9.6□□□□□ -0.87
ATXN3-221ENST00000553498 ZNF454Q8N9F8 522 aa9.6□□□□□ -0.87
ATXN3-221ENST00000553498 RUNDC1Q96C34 613 aa9.6□□□□□ -0.87
ATXN3-221ENST00000553498 RCAN3Q9UKA8 241 aa9.6□□□□□ -0.87
ATXN3-221ENST00000553498 AXIN2Q9Y2T1 843 aa9.6□□□□□ -0.87
ATXN3-221ENST00000553498 AATKQ6ZMQ8 1374 aa9.6□□□□□ -0.87
ATXN3-221ENST00000553498 CFAP65Q6ZU64 1925 aaKnown RBP9.6□□□□□ -0.87
ATXN3-221ENST00000553498 PNPLA6Q8IY17 1366 aa9.6□□□□□ -0.87
ATXN3-221ENST00000553498 FER1L4A9Z1Z3 1794 aa9.6□□□□□ -0.87
ATXN3-221ENST00000553498 CEP170BQ9Y4F5 1589 aaPredicted RBP9.59□□□□□ -0.87
ATXN3-221ENST00000553498 E9PSI1 815 aa9.59□□□□□ -0.87
ATXN3-221ENST00000553498 PBX2P40425 430 aa9.59□□□□□ -0.87
ATXN3-221ENST00000553498 KCNV2Q8TDN2 545 aa9.59□□□□□ -0.87
ATXN3-221ENST00000553498 AMOTL2Q9Y2J4 779 aa9.59□□□□□ -0.87
ATXN3-221ENST00000553498 PCDHGA10Q9Y5H3 936 aa9.59□□□□□ -0.87
ATXN3-221ENST00000553498 TRMT2AQ8IZ69 625 aaKnown RBP9.58□□□□□ -0.88
ATXN3-221ENST00000553498 ANKARQ7Z5J8 1434 aa9.57□□□□□ -0.88
ATXN3-221ENST00000553498 SPDYE16A6NNV3 312 aaPredicted RBP9.57□□□□□ -0.88
ATXN3-221ENST00000553498 RRP1P56182 461 aaKnown RBP9.57□□□□□ -0.88
ATXN3-221ENST00000553498 WDR63Q8IWG1 891 aa9.57□□□□□ -0.88
ATXN3-221ENST00000553498 PTPRUQ92729 1446 aa9.56□□□□□ -0.88
ATXN3-221ENST00000553498 ADAMTSL3P82987 1691 aa9.56□□□□□ -0.88
ATXN3-221ENST00000553498 ARHGAP33O14559 1287 aa9.56□□□□□ -0.88
ATXN3-221ENST00000553498 APAF1O14727 1248 aa9.56□□□□□ -0.88
ATXN3-221ENST00000553498 SLFN5Q08AF3 891 aa9.56□□□□□ -0.88
ATXN3-221ENST00000553498 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.56□□□□□ -0.88
ATXN3-221ENST00000553498 COG3Q96JB2 828 aa9.56□□□□□ -0.88
ATXN3-221ENST00000553498 SLC26A8Q96RN1 970 aa9.56□□□□□ -0.88
ATXN3-221ENST00000553498 GGNBP2Q9H3C7 697 aa9.56□□□□□ -0.88
ATXN3-221ENST00000553498 BCL2L12Q9HB09 334 aa9.56□□□□□ -0.88
ATXN3-221ENST00000553498 TTC21AQ8NDW8 1320 aa9.56□□□□□ -0.88
ATXN3-221ENST00000553498 DIAPH1O60610 1272 aaKnown RBP9.55□□□□□ -0.88
ATXN3-221ENST00000553498 PHF14O94880 888 aa9.55□□□□□ -0.88
ATXN3-221ENST00000553498 PSEN2P49810 448 aa9.55□□□□□ -0.88
ATXN3-221ENST00000553498 LSM11P83369 360 aaKnown RBP eCLIP9.55□□□□□ -0.88
ATXN3-221ENST00000553498 DUSP27Q5VZP5 1158 aa9.55□□□□□ -0.88
ATXN3-221ENST00000553498 ARHGEF1Q92888 912 aaKnown RBP9.55□□□□□ -0.88
ATXN3-221ENST00000553498 ZDHHC16Q969W1 377 aa9.55□□□□□ -0.88
ATXN3-221ENST00000553498 ADAM33Q9BZ11 813 aa9.55□□□□□ -0.88
ATXN3-221ENST00000553498 FCHSD2O94868 740 aa9.54□□□□□ -0.88
ATXN3-221ENST00000553498 U2AF1L5P0DN76 240 aaPredicted RBP9.54□□□□□ -0.88
ATXN3-221ENST00000553498 TNNT2P45379 298 aaPredicted RBP9.54□□□□□ -0.88
ATXN3-221ENST00000553498 U2AF1Q01081 240 aaKnown RBP eCLIP9.54□□□□□ -0.88
ATXN3-221ENST00000553498 DMRTA1Q5VZB9 504 aa9.54□□□□□ -0.88
ATXN3-221ENST00000553498 ZNF142P52746 1687 aaPredicted RBP9.54□□□□□ -0.88
ATXN3-221ENST00000553498 COL3A1P02461 1466 aaPredicted RBP9.53□□□□□ -0.88
ATXN3-221ENST00000553498 IQSEC2Q5JU85 1478 aa9.53□□□□□ -0.88
ATXN3-221ENST00000553498 NEFMP07197 916 aa9.53□□□□□ -0.88
ATXN3-221ENST00000553498 CT47B1P0C2W7 299 aaPredicted RBP9.53□□□□□ -0.88
ATXN3-221ENST00000553498 WWC1Q8IX03 1113 aa9.53□□□□□ -0.88
ATXN3-221ENST00000553498 TCP11L2Q8N4U5 519 aa9.53□□□□□ -0.88
ATXN3-221ENST00000553498 CDCA7LQ96GN5 454 aa9.53□□□□□ -0.88
ATXN3-221ENST00000553498 SALL2Q9Y467 1007 aaPredicted RBP9.53□□□□□ -0.88
ATXN3-221ENST00000553498 IL16Q14005 1332 aa9.53□□□□□ -0.88
ATXN3-221ENST00000553498 PRR36Q9H6K5 1346 aa9.53□□□□□ -0.88
ATXN3-221ENST00000553498 NKTRP30414 1462 aaKnown RBP9.53□□□□□ -0.88
ATXN3-221ENST00000553498 CDK12Q9NYV4 1490 aaPredicted RBP9.53□□□□□ -0.88
ATXN3-221ENST00000553498 USP6P35125 1406 aa9.52□□□□□ -0.89
ATXN3-221ENST00000553498 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.52□□□□□ -0.89
ATXN3-221ENST00000553498 CCDC146Q8IYE0 955 aa9.52□□□□□ -0.89
ATXN3-221ENST00000553498 DDX12PQ92771 950 aa9.52□□□□□ -0.89
ATXN3-221ENST00000553498 MYH16Q9H6N6 1097 aa9.52□□□□□ -0.89
ATXN3-221ENST00000553498 POLKQ9UBT6 870 aa9.52□□□□□ -0.89
ATXN3-221ENST00000553498 ACEP12821 1306 aa9.52□□□□□ -0.89
ATXN3-221ENST00000553498 TTC21BQ7Z4L5 1316 aa9.52□□□□□ -0.89
ATXN3-221ENST00000553498 MAPK8IP3Q9UPT6 1336 aa9.52□□□□□ -0.89
ATXN3-221ENST00000553498 XRN1Q8IZH2 1706 aaKnown RBP9.51□□□□□ -0.89
ATXN3-221ENST00000553498 SSH2Q76I76 1423 aa9.51□□□□□ -0.89
ATXN3-221ENST00000553498 TYW1BQ6NUM6 668 aa9.51□□□□□ -0.89
ATXN3-221ENST00000553498 ANKRD13DQ6ZTN6 518 aa9.51□□□□□ -0.89
ATXN3-221ENST00000553498 PLEKHF1Q96S99 279 aa9.51□□□□□ -0.89
ATXN3-221ENST00000553498 ANKRD26Q9UPS8 1709 aa9.51□□□□□ -0.89
ATXN3-221ENST00000553498 KIF24Q5T7B8 1368 aa9.5□□□□□ -0.89
ATXN3-221ENST00000553498 USP31Q70CQ4 1352 aa9.5□□□□□ -0.89
ATXN3-221ENST00000553498 NPHP4O75161 1426 aaPredicted RBP9.5□□□□□ -0.89
ATXN3-221ENST00000553498 KCNA6P17658 529 aa9.5□□□□□ -0.89
ATXN3-221ENST00000553498 PRIM1P49642 420 aaKnown RBP9.5□□□□□ -0.89
ATXN3-221ENST00000553498 CALD1Q05682 793 aaKnown RBP9.5□□□□□ -0.89
ATXN3-221ENST00000553498 AAMPQ13685 434 aa9.5□□□□□ -0.89
ATXN3-221ENST00000553498 FBXW7Q969H0 707 aa9.5□□□□□ -0.89
ATXN3-221ENST00000553498 KCNK17Q96T54 332 aa9.5□□□□□ -0.89
ATXN3-221ENST00000553498 EPAS1Q99814 870 aa9.5□□□□□ -0.89
ATXN3-221ENST00000553498 SHPRHQ149N8 1683 aa9.5□□□□□ -0.89
ATXN3-221ENST00000553498 RIMS1Q86UR5 1692 aaKnown RBP9.5□□□□□ -0.89
ATXN3-221ENST00000553498 OVOS2A0A0J9YW53 1432 aa9.49□□□□□ -0.89
ATXN3-221ENST00000553498 OVOS2Q6IE36 1432 aa9.49□□□□□ -0.89
ATXN3-221ENST00000553498 U2SURPO15042 1029 aaKnown RBP9.49□□□□□ -0.89
ATXN3-221ENST00000553498 IRX6P78412 446 aaPredicted RBP9.49□□□□□ -0.89
ATXN3-221ENST00000553498 NME9Q86XW9 330 aa9.49□□□□□ -0.89
ATXN3-221ENST00000553498 LRRC7Q96NW7 1537 aa9.48□□□□□ -0.89
ATXN3-221ENST00000553498 PTPREP23469 700 aa9.48□□□□□ -0.89
ATXN3-221ENST00000553498 LMOD3Q0VAK6 560 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms