RNA–Protein interactions for RNA: ENST00000553455.1

SYNE2-210, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2 BASIC

Gene SYNE2, Length 674 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-210ENST00000553455 SLC19A1P41440 591 aa9.35□□□□□ -0.91
SYNE2-210ENST00000553455 USP4Q13107 963 aa9.35□□□□□ -0.91
SYNE2-210ENST00000553455 ARID5BQ14865 1188 aa9.35□□□□□ -0.91
SYNE2-210ENST00000553455 WNT7AO00755 349 aa9.34□□□□□ -0.91
SYNE2-210ENST00000553455 PHLDB3Q6NSJ2 640 aa9.34□□□□□ -0.91
SYNE2-210ENST00000553455 ERVK-9P63128 1117 aa9.33□□□□□ -0.92
SYNE2-210ENST00000553455 CCDC102BQ68D86 513 aa9.33□□□□□ -0.92
SYNE2-210ENST00000553455 CLP1Q92989 425 aaKnown RBP9.33□□□□□ -0.92
SYNE2-210ENST00000553455 SIRT1Q96EB6 747 aa9.33□□□□□ -0.92
SYNE2-210ENST00000553455 MRGPRX2Q96LB1 330 aa9.33□□□□□ -0.92
SYNE2-210ENST00000553455 PATL2C9JE40 543 aaKnown RBP9.32□□□□□ -0.92
SYNE2-210ENST00000553455 ADH1CP00326 375 aa9.32□□□□□ -0.92
SYNE2-210ENST00000553455 SWI5Q1ZZU3 235 aa9.32□□□□□ -0.92
SYNE2-210ENST00000553455 SPRYD7Q5W111 196 aa9.32□□□□□ -0.92
SYNE2-210ENST00000553455 TPCN2Q8NHX9 752 aa9.32□□□□□ -0.92
SYNE2-210ENST00000553455 TMPRSS4Q9NRS4 437 aa9.32□□□□□ -0.92
SYNE2-210ENST00000553455 A0A0G2JS52 829 aa9.31□□□□□ -0.92
SYNE2-210ENST00000553455 GZF1Q9H116 711 aaPredicted RBP9.31□□□□□ -0.92
SYNE2-210ENST00000553455 SFI1A8K8P3 1242 aa9.3□□□□□ -0.92
SYNE2-210ENST00000553455 MYCP01106 439 aaPredicted RBP9.3□□□□□ -0.92
SYNE2-210ENST00000553455 NR3C2P08235 984 aa9.3□□□□□ -0.92
SYNE2-210ENST00000553455 SSFA2P28290 1259 aa9.3□□□□□ -0.92
SYNE2-210ENST00000553455 SEC13P55735 322 aa9.3□□□□□ -0.92
SYNE2-210ENST00000553455 PSME1Q06323 249 aa9.3□□□□□ -0.92
SYNE2-210ENST00000553455 B4GALNT3Q6L9W6 998 aa9.3□□□□□ -0.92
SYNE2-210ENST00000553455 OSBPL3Q9H4L5 887 aa9.3□□□□□ -0.92
SYNE2-210ENST00000553455 IVNS1ABPQ9Y6Y0 642 aa9.3□□□□□ -0.92
SYNE2-210ENST00000553455 CC2D2BQ6DHV5 1058 aa9.29□□□□□ -0.92
SYNE2-210ENST00000553455 CCDC116Q8IYX3 515 aa9.29□□□□□ -0.92
SYNE2-210ENST00000553455 ZNF784Q8NCA9 323 aaPredicted RBP9.29□□□□□ -0.92
SYNE2-210ENST00000553455 CYLDQ9NQC7 956 aa9.29□□□□□ -0.92
SYNE2-210ENST00000553455 PLA2G2EQ9NZK7 142 aa9.29□□□□□ -0.92
SYNE2-210ENST00000553455 LILRA1O75019 489 aa9.28□□□□□ -0.92
SYNE2-210ENST00000553455 DHX9Q08211 1270 aaKnown RBP9.28□□□□□ -0.92
SYNE2-210ENST00000553455 NR5A1Q13285 461 aa9.28□□□□□ -0.92
SYNE2-210ENST00000553455 PPP1R26Q5T8A7 1209 aaPredicted RBP9.28□□□□□ -0.92
SYNE2-210ENST00000553455 ZNF697Q5TEC3 545 aa9.28□□□□□ -0.92
SYNE2-210ENST00000553455 PKD2L1Q9P0L9 805 aa9.28□□□□□ -0.92
SYNE2-210ENST00000553455 GNEQ9Y223 722 aaKnown RBP9.28□□□□□ -0.92
SYNE2-210ENST00000553455 ATP2B4P23634 1241 aa9.27□□□□□ -0.93
SYNE2-210ENST00000553455 ZNF598Q86UK7 904 aaKnown RBP9.27□□□□□ -0.93
SYNE2-210ENST00000553455 TXNDC2Q86VQ3 553 aa9.27□□□□□ -0.93
SYNE2-210ENST00000553455 TMEM229AB2RXF0 380 aa9.26□□□□□ -0.93
SYNE2-210ENST00000553455 STAU1O95793 577 aaKnown RBP9.26□□□□□ -0.93
SYNE2-210ENST00000553455 SCNN1DP51172 638 aa9.26□□□□□ -0.93
SYNE2-210ENST00000553455 OCLNQ16625 522 aa9.26□□□□□ -0.93
SYNE2-210ENST00000553455 CCDC9Q9Y3X0 531 aaKnown RBP9.26□□□□□ -0.93
SYNE2-210ENST00000553455 M0R2N6 131 aa9.25□□□□□ -0.93
SYNE2-210ENST00000553455 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.25□□□□□ -0.93
SYNE2-210ENST00000553455 ZNF358Q9NW07 568 aa9.25□□□□□ -0.93
SYNE2-210ENST00000553455 RBM19Q9Y4C8 960 aaKnown RBP9.25□□□□□ -0.93
SYNE2-210ENST00000553455 PRMT3O60678 531 aa9.24□□□□□ -0.93
SYNE2-210ENST00000553455 LGR5O75473 907 aa9.24□□□□□ -0.93
SYNE2-210ENST00000553455 ADD1P35611 737 aaKnown RBP9.24□□□□□ -0.93
SYNE2-210ENST00000553455 TSEN2Q8NCE0 465 aaKnown RBP9.24□□□□□ -0.93
SYNE2-210ENST00000553455 PRKD2Q9BZL6 878 aa9.24□□□□□ -0.93
SYNE2-210ENST00000553455 WASLO00401 505 aaPredicted RBP9.23□□□□□ -0.93
SYNE2-210ENST00000553455 ALDH1A1P00352 501 aa9.23□□□□□ -0.93
SYNE2-210ENST00000553455 SCNN1AP37088 669 aa9.23□□□□□ -0.93
SYNE2-210ENST00000553455 MYT1Q01538 1121 aa9.23□□□□□ -0.93
SYNE2-210ENST00000553455 FOXC1Q12948 553 aa9.23□□□□□ -0.93
SYNE2-210ENST00000553455 TMCO4Q5TGY1 634 aa9.23□□□□□ -0.93
SYNE2-210ENST00000553455 C1orf216Q8TAB5 229 aa9.23□□□□□ -0.93
SYNE2-210ENST00000553455 PRIMPOLQ96LW4 560 aa9.23□□□□□ -0.93
SYNE2-210ENST00000553455 CXXC1Q9P0U4 656 aaPredicted RBP9.23□□□□□ -0.93
SYNE2-210ENST00000553455 V9GY48 417 aaPredicted RBP9.23□□□□□ -0.93
SYNE2-210ENST00000553455 GDF10P55107 478 aa9.22□□□□□ -0.93
SYNE2-210ENST00000553455 NNTQ13423 1086 aa9.22□□□□□ -0.93
SYNE2-210ENST00000553455 ETNK1Q9HBU6 452 aa9.22□□□□□ -0.93
SYNE2-210ENST00000553455 EMILIN1Q9Y6C2 1016 aa9.22□□□□□ -0.93
SYNE2-210ENST00000553455 GDF9O60383 454 aa9.21□□□□□ -0.94
SYNE2-210ENST00000553455 WEE1P30291 646 aa9.21□□□□□ -0.94
SYNE2-210ENST00000553455 CYP2U1Q7Z449 544 aa9.21□□□□□ -0.94
SYNE2-210ENST00000553455 ESF1Q9H501 851 aaKnown RBP9.21□□□□□ -0.94
SYNE2-210ENST00000553455 PGPEP1Q9NXJ5 209 aa9.21□□□□□ -0.94
SYNE2-210ENST00000553455 INHAP05111 366 aa9.2□□□□□ -0.94
SYNE2-210ENST00000553455 ARID4AP29374 1257 aaPredicted RBP9.2□□□□□ -0.94
SYNE2-210ENST00000553455 EPHA4P54764 986 aa9.2□□□□□ -0.94
SYNE2-210ENST00000553455 SND1Q7KZF4 910 aaKnown RBP eCLIP9.2□□□□□ -0.94
SYNE2-210ENST00000553455 TAS1R3Q7RTX0 852 aa9.2□□□□□ -0.94
SYNE2-210ENST00000553455 SNIP1Q8TAD8 396 aaKnown RBP9.2□□□□□ -0.94
SYNE2-210ENST00000553455 TRIM52Q96A61 297 aa9.2□□□□□ -0.94
SYNE2-210ENST00000553455 HINFPQ9BQA5 517 aa9.2□□□□□ -0.94
SYNE2-210ENST00000553455 KLF16Q9BXK1 252 aaPredicted RBP9.2□□□□□ -0.94
SYNE2-210ENST00000553455 CCER1Q8TC90 406 aaPredicted RBP9.19□□□□□ -0.94
SYNE2-210ENST00000553455 J3QL48 77 aa9.18□□□□□ -0.94
SYNE2-210ENST00000553455 GNRH1P01148 92 aa9.18□□□□□ -0.94
SYNE2-210ENST00000553455 SERPINB4P48594 390 aa9.18□□□□□ -0.94
SYNE2-210ENST00000553455 MFAP1P55081 439 aaKnown RBP9.18□□□□□ -0.94
SYNE2-210ENST00000553455 KDF1Q8NAX2 398 aaPredicted RBP9.18□□□□□ -0.94
SYNE2-210ENST00000553455 PURBQ96QR8 312 aaKnown RBP9.18□□□□□ -0.94
SYNE2-210ENST00000553455 WASF2Q9Y6W5 498 aa9.18□□□□□ -0.94
SYNE2-210ENST00000553455 ADH1AP07327 375 aa9.17□□□□□ -0.94
SYNE2-210ENST00000553455 CBLBQ13191 982 aa9.17□□□□□ -0.94
SYNE2-210ENST00000553455 FKBP5Q13451 457 aaPredicted RBP9.17□□□□□ -0.94
SYNE2-210ENST00000553455 TRIM67Q6ZTA4 783 aa9.17□□□□□ -0.94
SYNE2-210ENST00000553455 TNS4Q8IZW8 715 aa9.17□□□□□ -0.94
SYNE2-210ENST00000553455 GAS2L2Q8NHY3 880 aa9.17□□□□□ -0.94
SYNE2-210ENST00000553455 ITPKCQ96DU7 683 aa9.17□□□□□ -0.94
SYNE2-210ENST00000553455 SLC4A9Q96Q91 983 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms