RNA–Protein interactions for RNA: ENST00000553391.2

MTHFD1-203, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 4

Gene MTHFD1, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-203ENST00000553391 TMEM57Q8N5G2 664 aa11.98□□□□□ -0.49
MTHFD1-203ENST00000553391 IL17REQ8NFR9 667 aa11.98□□□□□ -0.49
MTHFD1-203ENST00000553391 RTF1Q92541 710 aaKnown RBP11.98□□□□□ -0.49
MTHFD1-203ENST00000553391 RWDD1Q9H446 243 aaPredicted RBP11.98□□□□□ -0.49
MTHFD1-203ENST00000553391 BABAM1Q9NWV8 329 aa11.98□□□□□ -0.49
MTHFD1-203ENST00000553391 GNAT3A8MTJ3 354 aa11.97□□□□□ -0.49
MTHFD1-203ENST00000553391 HAP1P54257 671 aaPredicted RBP11.97□□□□□ -0.49
MTHFD1-203ENST00000553391 SKAP1Q86WV1 359 aa11.97□□□□□ -0.49
MTHFD1-203ENST00000553391 FTSJ3Q8IY81 847 aaKnown RBP11.97□□□□□ -0.49
MTHFD1-203ENST00000553391 ZBTB40Q9NUA8 1239 aa11.97□□□□□ -0.49
MTHFD1-203ENST00000553391 NFAT5O94916 1531 aa11.96□□□□□ -0.49
MTHFD1-203ENST00000553391 DCCP43146 1447 aa11.96□□□□□ -0.49
MTHFD1-203ENST00000553391 ZBTB7BO15156 539 aaPredicted RBP11.96□□□□□ -0.49
MTHFD1-203ENST00000553391 ADRA2BP18089 450 aa11.96□□□□□ -0.49
MTHFD1-203ENST00000553391 HDAC1Q13547 482 aaPredicted RBP11.95□□□□□ -0.5
MTHFD1-203ENST00000553391 TAF7Q15545 349 aaPredicted RBP11.95□□□□□ -0.5
MTHFD1-203ENST00000553391 API5Q9BZZ5 524 aaKnown RBP11.95□□□□□ -0.5
MTHFD1-203ENST00000553391 MIS18AQ9NYP9 233 aa11.95□□□□□ -0.5
MTHFD1-203ENST00000553391 SLIT3O75094 1523 aa11.95□□□□□ -0.5
MTHFD1-203ENST00000553391 KRT24Q2M2I5 525 aa11.94□□□□□ -0.5
MTHFD1-203ENST00000553391 LMOD2Q6P5Q4 547 aa11.94□□□□□ -0.5
MTHFD1-203ENST00000553391 USHBP1Q8N6Y0 703 aa11.94□□□□□ -0.5
MTHFD1-203ENST00000553391 CHMP4BQ9H444 224 aaKnown RBP11.94□□□□□ -0.5
MTHFD1-203ENST00000553391 AXIN2Q9Y2T1 843 aa11.94□□□□□ -0.5
MTHFD1-203ENST00000553391 MSH6P52701 1360 aa11.93□□□□□ -0.5
MTHFD1-203ENST00000553391 PLEKHO1Q53GL0 409 aaPredicted RBP11.93□□□□□ -0.5
MTHFD1-203ENST00000553391 ITPRIPQ8IWB1 547 aa11.93□□□□□ -0.5
MTHFD1-203ENST00000553391 TSPYL4Q9UJ04 414 aa11.93□□□□□ -0.5
MTHFD1-203ENST00000553391 PDZRN3Q9UPQ7 1066 aa11.93□□□□□ -0.5
MTHFD1-203ENST00000553391 DLG5Q8TDM6 1919 aa11.93□□□□□ -0.5
MTHFD1-203ENST00000553391 ABCC4O15439 1325 aa11.92□□□□□ -0.5
MTHFD1-203ENST00000553391 NPHP3Q7Z494 1330 aa11.92□□□□□ -0.5
MTHFD1-203ENST00000553391 AMOTQ4VCS5 1084 aa11.92□□□□□ -0.5
MTHFD1-203ENST00000553391 ANKRD24Q8TF21 1146 aa11.92□□□□□ -0.5
MTHFD1-203ENST00000553391 DDX17Q92841 729 aaKnown RBP11.92□□□□□ -0.5
MTHFD1-203ENST00000553391 LRRC59Q96AG4 307 aaKnown RBP11.92□□□□□ -0.5
MTHFD1-203ENST00000553391 STRCP1A6NGW2 1772 aa11.92□□□□□ -0.5
MTHFD1-203ENST00000553391 SOS1Q07889 1333 aaPredicted RBP11.91□□□□□ -0.5
MTHFD1-203ENST00000553391 SPATA31A3Q5VYP0 1347 aa11.91□□□□□ -0.5
MTHFD1-203ENST00000553391 LMTK3Q96Q04 1460 aa11.91□□□□□ -0.5
MTHFD1-203ENST00000553391 ZBTB7CA1YPR0 619 aa11.91□□□□□ -0.5
MTHFD1-203ENST00000553391 AKAP4Q5JQC9 854 aa11.91□□□□□ -0.5
MTHFD1-203ENST00000553391 INTS3Q68E01 1043 aaKnown RBP11.91□□□□□ -0.5
MTHFD1-203ENST00000553391 SMC5Q8IY18 1101 aa11.91□□□□□ -0.5
MTHFD1-203ENST00000553391 NCAPD2Q15021 1401 aa11.91□□□□□ -0.5
MTHFD1-203ENST00000553391 MAP3K5Q99683 1374 aa11.91□□□□□ -0.5
MTHFD1-203ENST00000553391 ZC3H6P61129 1189 aaKnown RBP11.9□□□□□ -0.5
MTHFD1-203ENST00000553391 FAM161AQ3B820 660 aa11.9□□□□□ -0.5
MTHFD1-203ENST00000553391 LGR6Q9HBX8 967 aa11.9□□□□□ -0.5
MTHFD1-203ENST00000553391 TRPM3Q9HCF6 1732 aaPredicted RBP11.9□□□□□ -0.5
MTHFD1-203ENST00000553391 KIF1AQ12756 1690 aa11.9□□□□□ -0.5
MTHFD1-203ENST00000553391 SLC4A2P04920 1241 aa11.89□□□□□ -0.51
MTHFD1-203ENST00000553391 RGS3P49796 1198 aa11.89□□□□□ -0.51
MTHFD1-203ENST00000553391 BRINP3Q76B58 766 aa11.89□□□□□ -0.51
MTHFD1-203ENST00000553391 SLAIN2Q9P270 581 aa11.89□□□□□ -0.51
MTHFD1-203ENST00000553391 CEMIPQ8WUJ3 1361 aa11.89□□□□□ -0.51
MTHFD1-203ENST00000553391 PHRF1Q9P1Y6 1649 aaKnown RBP11.89□□□□□ -0.51
MTHFD1-203ENST00000553391 PTPRCP08575 1304 aa11.88□□□□□ -0.51
MTHFD1-203ENST00000553391 C8orf34Q49A92 452 aa11.88□□□□□ -0.51
MTHFD1-203ENST00000553391 ZNF335Q9H4Z2 1342 aaPredicted RBP11.87□□□□□ -0.51
MTHFD1-203ENST00000553391 RNMTO43148 476 aaKnown RBP11.87□□□□□ -0.51
MTHFD1-203ENST00000553391 G2E3Q7L622 706 aa11.87□□□□□ -0.51
MTHFD1-203ENST00000553391 SOS2Q07890 1332 aaPredicted RBP11.86□□□□□ -0.51
MTHFD1-203ENST00000553391 PLEKHG5O94827 1062 aa11.86□□□□□ -0.51
MTHFD1-203ENST00000553391 EIF4A1P60842 406 aaKnown RBP11.86□□□□□ -0.51
MTHFD1-203ENST00000553391 CCDC30Q5VVM6 783 aa11.86□□□□□ -0.51
MTHFD1-203ENST00000553391 ZNF530Q6P9A1 599 aaPredicted RBP11.86□□□□□ -0.51
MTHFD1-203ENST00000553391 SIRT2Q8IXJ6 389 aa11.86□□□□□ -0.51
MTHFD1-203ENST00000553391 CABLES1Q8TDN4 633 aa11.86□□□□□ -0.51
MTHFD1-203ENST00000553391 MED1Q15648 1581 aaPredicted RBP11.86□□□□□ -0.51
MTHFD1-203ENST00000553391 STRCQ7RTU9 1775 aa11.86□□□□□ -0.51
MTHFD1-203ENST00000553391 PXDNQ92626 1479 aa11.85□□□□□ -0.51
MTHFD1-203ENST00000553391 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.85□□□□□ -0.515e-7■■□□□ 14
MTHFD1-203ENST00000553391 TNS3Q68CZ2 1445 aa11.85□□□□□ -0.51
MTHFD1-203ENST00000553391 ERBB3P21860 1342 aa11.85□□□□□ -0.51
MTHFD1-203ENST00000553391 ALS2Q96Q42 1657 aa11.84□□□□□ -0.51
MTHFD1-203ENST00000553391 CPDO75976 1380 aa11.84□□□□□ -0.51
MTHFD1-203ENST00000553391 HOXB7P09629 217 aa11.84□□□□□ -0.51
MTHFD1-203ENST00000553391 NUCB1Q02818 461 aa11.84□□□□□ -0.51
MTHFD1-203ENST00000553391 MPRIPQ6WCQ1 1025 aa11.84□□□□□ -0.51
MTHFD1-203ENST00000553391 IPO9Q96P70 1041 aaKnown RBP11.84□□□□□ -0.51
MTHFD1-203ENST00000553391 CHMP4AQ9BY43 222 aa11.84□□□□□ -0.51
MTHFD1-203ENST00000553391 LTN1O94822 1766 aa11.84□□□□□ -0.51
MTHFD1-203ENST00000553391 RGS12O14924 1447 aa11.84□□□□□ -0.51
MTHFD1-203ENST00000553391 KCNQ3O43525 872 aa11.83□□□□□ -0.52
MTHFD1-203ENST00000553391 RPAP2Q8IXW5 612 aaPredicted RBP11.83□□□□□ -0.52
MTHFD1-203ENST00000553391 GCC1Q96CN9 775 aa11.83□□□□□ -0.52
MTHFD1-203ENST00000553391 TATP17735 454 aaPredicted RBP11.82□□□□□ -0.52
MTHFD1-203ENST00000553391 ANP32AP39687 249 aaKnown RBP11.82□□□□□ -0.52
MTHFD1-203ENST00000553391 CCT4P50991 539 aaKnown RBP11.82□□□□□ -0.52
MTHFD1-203ENST00000553391 C1orf141Q5JVX7 400 aa11.82□□□□□ -0.52
MTHFD1-203ENST00000553391 STK31Q9BXU1 1019 aa11.82□□□□□ -0.52
MTHFD1-203ENST00000553391 DCTPP1Q9H773 170 aa11.82□□□□□ -0.52
MTHFD1-203ENST00000553391 NLRP2Q9NX02 1062 aa11.82□□□□□ -0.52
MTHFD1-203ENST00000553391 BTBD11A6QL63 1104 aa11.81□□□□□ -0.52
MTHFD1-203ENST00000553391 TEFQ10587 303 aa11.81□□□□□ -0.52
MTHFD1-203ENST00000553391 CHRNA2Q15822 529 aa11.81□□□□□ -0.52
MTHFD1-203ENST00000553391 ANKRD44Q8N8A2 993 aa11.81□□□□□ -0.52
MTHFD1-203ENST00000553391 RAPGEF4Q8WZA2 1011 aa11.81□□□□□ -0.52
MTHFD1-203ENST00000553391 PLEKHG2Q9H7P9 1386 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 93.3 ms