RNA–Protein interactions for RNA: ENST00000553145.1

HDAC4-217, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-217ENST00000553145 EIF4A2Q14240 407 aaKnown RBP25.67■■□□□ 1.7
HDAC4-217ENST00000553145 RAPGEF4Q8WZA2 1011 aa25.67■■□□□ 1.7
HDAC4-217ENST00000553145 ACSBG1Q96GR2 724 aa25.67■■□□□ 1.7
HDAC4-217ENST00000553145 RGPD3A6NKT7 1758 aaPredicted RBP25.67■■□□□ 1.7
HDAC4-217ENST00000553145 RGPD4Q7Z3J3 1758 aa25.67■■□□□ 1.7
HDAC4-217ENST00000553145 ZCRB1Q8TBF4 217 aaKnown RBP25.66■■□□□ 1.7
HDAC4-217ENST00000553145 EYA1Q99502 592 aa25.66■■□□□ 1.7
HDAC4-217ENST00000553145 TATP17735 454 aaPredicted RBP25.64■■□□□ 1.7
HDAC4-217ENST00000553145 PLSCR1O15162 318 aa25.63■■□□□ 1.69
HDAC4-217ENST00000553145 CC2D1BQ5T0F9 858 aaKnown RBP25.63■■□□□ 1.69
HDAC4-217ENST00000553145 PKD1L3Q7Z443 1732 aa25.62■■□□□ 1.69
HDAC4-217ENST00000553145 DOT1LQ8TEK3 1739 aa25.62■■□□□ 1.69
HDAC4-217ENST00000553145 PSDA5PKW4 1024 aaPredicted RBP25.61■■□□□ 1.69
HDAC4-217ENST00000553145 NPC1L1Q9UHC9 1359 aa25.6■■□□□ 1.69
HDAC4-217ENST00000553145 BTAF1O14981 1849 aa25.6■■□□□ 1.69
HDAC4-217ENST00000553145 IGSF1Q8N6C5 1336 aa25.59■■□□□ 1.69
HDAC4-217ENST00000553145 PROM2Q8N271 834 aa25.58■■□□□ 1.69
HDAC4-217ENST00000553145 CNGB1Q14028 1251 aaPredicted RBP25.57■■□□□ 1.68
HDAC4-217ENST00000553145 R3HDM1Q15032 1099 aaKnown RBP25.57■■□□□ 1.68
HDAC4-217ENST00000553145 PCDH11XQ9BZA7 1347 aa25.56■■□□□ 1.68
HDAC4-217ENST00000553145 PCDH11YQ9BZA8 1340 aa25.56■■□□□ 1.68
HDAC4-217ENST00000553145 CYP27B1O15528 508 aa25.55■■□□□ 1.68
HDAC4-217ENST00000553145 PRIM1P49642 420 aaKnown RBP25.53■■□□□ 1.68
HDAC4-217ENST00000553145 MTHFSP49914 203 aa25.53■■□□□ 1.68
HDAC4-217ENST00000553145 TXNRD1Q16881 649 aa25.53■■□□□ 1.68
HDAC4-217ENST00000553145 KAT6BQ8WYB5 2073 aa25.52■■□□□ 1.68
HDAC4-217ENST00000553145 TOGARAM1Q9Y4F4 1720 aa25.51■■□□□ 1.68
HDAC4-217ENST00000553145 IL13P35225 146 aa25.51■■□□□ 1.67
HDAC4-217ENST00000553145 SYTL4Q96C24 671 aaPredicted RBP25.51■■□□□ 1.67
HDAC4-217ENST00000553145 ANO8Q9HCE9 1232 aaPredicted RBP25.5■■□□□ 1.67
HDAC4-217ENST00000553145 NBPF14Q5TI25 921 aa25.49■■□□□ 1.67
HDAC4-217ENST00000553145 AEBP1Q8IUX7 1158 aa25.49■■□□□ 1.67
HDAC4-217ENST00000553145 SPG7Q9UQ90 795 aa25.49■■□□□ 1.67
HDAC4-217ENST00000553145 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.48■■□□□ 1.67
HDAC4-217ENST00000553145 COL3A1P02461 1466 aaPredicted RBP25.47■■□□□ 1.67
HDAC4-217ENST00000553145 PAPPAQ13219 1627 aa25.46■■□□□ 1.67
HDAC4-217ENST00000553145 PLEKHG2Q9H7P9 1386 aa25.45■■□□□ 1.67
HDAC4-217ENST00000553145 KDRP35968 1356 aa25.44■■□□□ 1.66
HDAC4-217ENST00000553145 NKX1-1Q15270 411 aaPredicted RBP25.44■■□□□ 1.66
HDAC4-217ENST00000553145 SULT6B1Q6IMI4 303 aa25.44■■□□□ 1.66
HDAC4-217ENST00000553145 LRP5O75197 1615 aa25.44■■□□□ 1.66
HDAC4-217ENST00000553145 PHKG2P15735 406 aa25.43■■□□□ 1.66
HDAC4-217ENST00000553145 LY75O60449 1722 aa25.43■■□□□ 1.66
HDAC4-217ENST00000553145 ITGB4P16144 1822 aa25.42■■□□□ 1.66
HDAC4-217ENST00000553145 LRRC4BQ9NT99 713 aa25.42■■□□□ 1.66
HDAC4-217ENST00000553145 IFNL2Q8IZJ0 200 aa25.41■■□□□ 1.66
HDAC4-217ENST00000553145 DIAPH1O60610 1272 aaKnown RBP25.4■■□□□ 1.66
HDAC4-217ENST00000553145 MPRIPQ6WCQ1 1025 aa25.39■■□□□ 1.66
HDAC4-217ENST00000553145 KCNQ4P56696 695 aa25.38■■□□□ 1.65
HDAC4-217ENST00000553145 PLEKHO1Q53GL0 409 aaPredicted RBP25.38■■□□□ 1.65
HDAC4-217ENST00000553145 CASZ1Q86V15 1759 aa25.38■■□□□ 1.65
HDAC4-217ENST00000553145 HMOX1P09601 288 aa25.37■■□□□ 1.65
HDAC4-217ENST00000553145 PPP2R1AP30153 589 aa25.37■■□□□ 1.65
HDAC4-217ENST00000553145 SLC15A2Q16348 729 aa25.37■■□□□ 1.65
HDAC4-217ENST00000553145 STK32BQ9NY57 414 aa25.37■■□□□ 1.65
HDAC4-217ENST00000553145 SLC27A3Q5K4L6 730 aa25.36■■□□□ 1.65
HDAC4-217ENST00000553145 ZNF530Q6P9A1 599 aaPredicted RBP25.36■■□□□ 1.65
HDAC4-217ENST00000553145 PDGFDQ9GZP0 370 aaPredicted RBP25.36■■□□□ 1.65
HDAC4-217ENST00000553145 ZNF827Q17R98 1081 aa25.35■■□□□ 1.65
HDAC4-217ENST00000553145 AMOTQ4VCS5 1084 aa25.35■■□□□ 1.65
HDAC4-217ENST00000553145 PIGBQ92521 554 aa25.35■■□□□ 1.65
HDAC4-217ENST00000553145 KDM6AO15550 1401 aaPredicted RBP25.35■■□□□ 1.65
HDAC4-217ENST00000553145 SRCAPQ6ZRS2 3230 aa25.34■■□□□ 1.65
HDAC4-217ENST00000553145 PALLDQ8WX93 1383 aa25.33■■□□□ 1.65
HDAC4-217ENST00000553145 CCNL1Q9UK58 526 aaPredicted RBP25.32■■□□□ 1.64
HDAC4-217ENST00000553145 TMOD3Q9NYL9 352 aa25.31■■□□□ 1.64
HDAC4-217ENST00000553145 U2SURPO15042 1029 aaKnown RBP25.3■■□□□ 1.64
HDAC4-217ENST00000553145 AKT1S1Q96B36 256 aa25.3■■□□□ 1.64
HDAC4-217ENST00000553145 DCAF5Q96JK2 942 aa25.3■■□□□ 1.64
HDAC4-217ENST00000553145 HSP90AB1P08238 724 aaKnown RBP25.29■■□□□ 1.64
HDAC4-217ENST00000553145 ZEB1P37275 1124 aaPredicted RBP25.29■■□□□ 1.64
HDAC4-217ENST00000553145 DDX10Q13206 875 aaKnown RBP25.29■■□□□ 1.64
HDAC4-217ENST00000553145 C1orf141Q5JVX7 400 aa25.28■■□□□ 1.64
HDAC4-217ENST00000553145 CFAP53Q96M91 514 aa25.28■■□□□ 1.64
HDAC4-217ENST00000553145 TUBGCP6Q96RT7 1819 aa25.28■■□□□ 1.64
HDAC4-217ENST00000553145 C5P01031 1676 aa25.27■■□□□ 1.64
HDAC4-217ENST00000553145 SMARCC1Q92922 1105 aaPredicted RBP25.27■■□□□ 1.64
HDAC4-217ENST00000553145 ERVV-2B6SEH9 535 aa25.26■■□□□ 1.63
HDAC4-217ENST00000553145 ASAP1Q9ULH1 1129 aa25.26■■□□□ 1.63
HDAC4-217ENST00000553145 QSER1Q2KHR3 1735 aa25.26■■□□□ 1.63
HDAC4-217ENST00000553145 TAF1LQ8IZX4 1826 aa25.25■■□□□ 1.63
HDAC4-217ENST00000553145 SCN11AQ9UI33 1791 aa25.24■■□□□ 1.63
HDAC4-217ENST00000553145 MTHFSDQ2M296 383 aaKnown RBP25.24■■□□□ 1.63
HDAC4-217ENST00000553145 AKAP4Q5JQC9 854 aa25.24■■□□□ 1.63
HDAC4-217ENST00000553145 ATG3Q9NT62 314 aa25.24■■□□□ 1.63
HDAC4-217ENST00000553145 ZBTB7AO95365 584 aa25.23■■□□□ 1.63
HDAC4-217ENST00000553145 SPON1Q9HCB6 807 aa25.23■■□□□ 1.63
HDAC4-217ENST00000553145 PNPLA7Q6ZV29 1317 aa25.22■■□□□ 1.63
HDAC4-217ENST00000553145 CABP4P57796 275 aa25.21■■□□□ 1.63
HDAC4-217ENST00000553145 ADAMTS7Q9UKP4 1686 aa25.2■■□□□ 1.63
HDAC4-217ENST00000553145 LOC102724428A0A0B4J2F2 783 aa25.2■■□□□ 1.62
HDAC4-217ENST00000553145 SIK1P57059 783 aa25.2■■□□□ 1.62
HDAC4-217ENST00000553145 RSPH6AQ9H0K4 717 aa25.2■■□□□ 1.62
HDAC4-217ENST00000553145 TFCP2L1Q9NZI6 479 aa25.2■■□□□ 1.62
HDAC4-217ENST00000553145 C4BP0C0L5 1744 aa25.2■■□□□ 1.62
HDAC4-217ENST00000553145 LGR6Q9HBX8 967 aa25.19■■□□□ 1.62
HDAC4-217ENST00000553145 NUDCQ9Y266 331 aa25.19■■□□□ 1.62
HDAC4-217ENST00000553145 VIRMAQ69YN4 1812 aaKnown RBP25.19■■□□□ 1.62
HDAC4-217ENST00000553145 MRC1P22897 1456 aa25.18■■□□□ 1.62
HDAC4-217ENST00000553145 ATF5Q9Y2D1 282 aaPredicted RBP25.18■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 85.1 ms