RNA–Protein interactions for RNA: ENST00000553096.5

BEST3-212, Transcript of bestrophin 3, humanhuman

TSL 1 (best) BASIC

Gene BEST3, Length 2,929 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-212ENST00000553096 ACEP12821 1306 aa9.2□□□□□ -0.94
BEST3-212ENST00000553096 HMOX1P09601 288 aa9.2□□□□□ -0.94
BEST3-212ENST00000553096 RIPK4P57078 832 aa9.2□□□□□ -0.94
BEST3-212ENST00000553096 PLCD3Q8N3E9 789 aa9.2□□□□□ -0.94
BEST3-212ENST00000553096 PCDHB15Q9Y5E8 787 aa9.2□□□□□ -0.94
BEST3-212ENST00000553096 ZNF335Q9H4Z2 1342 aaPredicted RBP9.19□□□□□ -0.94
BEST3-212ENST00000553096 EXOSC9Q06265 439 aaKnown RBP9.19□□□□□ -0.94
BEST3-212ENST00000553096 MVPQ14764 893 aaKnown RBP9.19□□□□□ -0.94
BEST3-212ENST00000553096 PNNQ9H307 717 aaKnown RBP9.19□□□□□ -0.94
BEST3-212ENST00000553096 RNF216Q9NWF9 866 aaPredicted RBP9.19□□□□□ -0.94
BEST3-212ENST00000553096 AMOTL2Q9Y2J4 779 aa9.19□□□□□ -0.94
BEST3-212ENST00000553096 TTC21BQ7Z4L5 1316 aa9.19□□□□□ -0.94
BEST3-212ENST00000553096 LTN1O94822 1766 aa9.19□□□□□ -0.94
BEST3-212ENST00000553096 FCHSD2O94868 740 aa9.19□□□□□ -0.94
BEST3-212ENST00000553096 XRCC6P12956 609 aaKnown RBP eCLIP9.19□□□□□ -0.94
BEST3-212ENST00000553096 C22orf23Q9BZE7 217 aa9.19□□□□□ -0.94
BEST3-212ENST00000553096 IL16Q14005 1332 aa9.19□□□□□ -0.94
BEST3-212ENST00000553096 PLEKHG3A1L390 1219 aa9.18□□□□□ -0.94
BEST3-212ENST00000553096 ZKSCAN2Q63HK3 967 aa9.18□□□□□ -0.94
BEST3-212ENST00000553096 HSCBQ8IWL3 235 aa9.18□□□□□ -0.94
BEST3-212ENST00000553096 COG3Q96JB2 828 aa9.18□□□□□ -0.94
BEST3-212ENST00000553096 TBX22Q9Y458 520 aa9.18□□□□□ -0.94
BEST3-212ENST00000553096 EID1Q9Y6B2 187 aa9.18□□□□□ -0.94
BEST3-212ENST00000553096 TRAK2O60296 914 aa9.18□□□□□ -0.94
BEST3-212ENST00000553096 TMEM132AQ24JP5 1023 aa9.18□□□□□ -0.94
BEST3-212ENST00000553096 USP31Q70CQ4 1352 aa9.18□□□□□ -0.94
BEST3-212ENST00000553096 HDAC1Q13547 482 aaPredicted RBP9.17□□□□□ -0.94
BEST3-212ENST00000553096 THUMPD2Q9BTF0 503 aaKnown RBP9.17□□□□□ -0.94
BEST3-212ENST00000553096 DZIP1LQ8IYY4 767 aaKnown RBP9.17□□□□□ -0.94
BEST3-212ENST00000553096 ZNF692Q9BU19 519 aaPredicted RBP9.17□□□□□ -0.94
BEST3-212ENST00000553096 CIZ1Q9ULV3 898 aaPredicted RBP9.17□□□□□ -0.94
BEST3-212ENST00000553096 NFE2L2Q16236 605 aa9.16□□□□□ -0.94
BEST3-212ENST00000553096 SSH1Q8WYL5 1049 aa9.16□□□□□ -0.94
BEST3-212ENST00000553096 SKOR2Q2VWA4 1001 aaPredicted RBP9.16□□□□□ -0.94
BEST3-212ENST00000553096 DDX19BQ9UMR2 479 aa9.16□□□□□ -0.94
BEST3-212ENST00000553096 NPHP4O75161 1426 aaPredicted RBP9.16□□□□□ -0.94
BEST3-212ENST00000553096 RGPD2P0DJD1 1756 aa9.16□□□□□ -0.94
BEST3-212ENST00000553096 SNX21Q969T3 373 aa9.15□□□□□ -0.94
BEST3-212ENST00000553096 NCOA3Q9Y6Q9 1424 aa9.15□□□□□ -0.94
BEST3-212ENST00000553096 NCLP19338 710 aaKnown RBP9.15□□□□□ -0.94
BEST3-212ENST00000553096 EIF4A2Q14240 407 aaKnown RBP9.15□□□□□ -0.94
BEST3-212ENST00000553096 AEBP1Q8IUX7 1158 aa9.15□□□□□ -0.94
BEST3-212ENST00000553096 LRRC37A3O60309 1634 aa9.15□□□□□ -0.94
BEST3-212ENST00000553096 NWD1Q149M9 1564 aa9.15□□□□□ -0.95
BEST3-212ENST00000553096 KCNA6P17658 529 aa9.15□□□□□ -0.95
BEST3-212ENST00000553096 MFAP1P55081 439 aaKnown RBP9.15□□□□□ -0.95
BEST3-212ENST00000553096 CERKQ8TCT0 537 aa9.15□□□□□ -0.95
BEST3-212ENST00000553096 GBP4Q96PP9 640 aa9.15□□□□□ -0.95
BEST3-212ENST00000553096 HSP90AA1P07900 732 aaKnown RBP9.14□□□□□ -0.95
BEST3-212ENST00000553096 TRIM27P14373 513 aa9.14□□□□□ -0.95
BEST3-212ENST00000553096 GRPEL1Q9HAV7 217 aa9.14□□□□□ -0.95
BEST3-212ENST00000553096 ANKARQ7Z5J8 1434 aa9.14□□□□□ -0.95
BEST3-212ENST00000553096 FAM83GA6ND36 823 aa9.14□□□□□ -0.95
BEST3-212ENST00000553096 ZNF853P0CG23 659 aa9.14□□□□□ -0.95
BEST3-212ENST00000553096 ZNF830Q96NB3 372 aaPredicted RBP9.14□□□□□ -0.95
BEST3-212ENST00000553096 SMC4Q9NTJ3 1288 aa9.14□□□□□ -0.95
BEST3-212ENST00000553096 RBM25P49756 843 aaKnown RBP9.13□□□□□ -0.95
BEST3-212ENST00000553096 RBM33Q96EV2 1170 aaKnown RBP9.13□□□□□ -0.95
BEST3-212ENST00000553096 CALD1Q05682 793 aaKnown RBP9.13□□□□□ -0.95
BEST3-212ENST00000553096 ILDR1Q86SU0 546 aaPredicted RBP9.13□□□□□ -0.95
BEST3-212ENST00000553096 SMC5Q8IY18 1101 aa9.13□□□□□ -0.95
BEST3-212ENST00000553096 NOB1Q9ULX3 412 aaKnown RBP9.13□□□□□ -0.95
BEST3-212ENST00000553096 HSP90AB2PQ58FF8 381 aa9.12□□□□□ -0.95
BEST3-212ENST00000553096 TSPYL6Q8N831 410 aa9.12□□□□□ -0.95
BEST3-212ENST00000553096 TRIM44Q96DX7 344 aaPredicted RBP9.12□□□□□ -0.95
BEST3-212ENST00000553096 GZF1Q9H116 711 aaPredicted RBP9.12□□□□□ -0.95
BEST3-212ENST00000553096 KIF16BQ96L93 1317 aa9.12□□□□□ -0.95
BEST3-212ENST00000553096 PIK3R4Q99570 1358 aa9.12□□□□□ -0.95
BEST3-212ENST00000553096 TMED8Q6PL24 325 aaPredicted RBP9.12□□□□□ -0.95
BEST3-212ENST00000553096 MBIPQ9NS73 344 aa9.12□□□□□ -0.95
BEST3-212ENST00000553096 CCDC9Q9Y3X0 531 aaKnown RBP9.12□□□□□ -0.95
BEST3-212ENST00000553096 ESPNB1AK53 854 aa9.11□□□□□ -0.95
BEST3-212ENST00000553096 IPO8O15397 1037 aaKnown RBP9.11□□□□□ -0.95
BEST3-212ENST00000553096 DDIT3P35638 169 aa9.11□□□□□ -0.95
BEST3-212ENST00000553096 DCTN1Q14203 1278 aa9.11□□□□□ -0.95
BEST3-212ENST00000553096 MAP3K19Q56UN5 1328 aa9.11□□□□□ -0.95
BEST3-212ENST00000553096 TTC21AQ8NDW8 1320 aa9.11□□□□□ -0.95
BEST3-212ENST00000553096 ATF7IPQ6VMQ6 1270 aa9.11□□□□□ -0.95
BEST3-212ENST00000553096 SPRYD3Q8NCJ5 442 aa9.11□□□□□ -0.95
BEST3-212ENST00000553096 PANK2Q9BZ23 570 aa9.11□□□□□ -0.95
BEST3-212ENST00000553096 STRCP1A6NGW2 1772 aa9.11□□□□□ -0.95
BEST3-212ENST00000553096 FAM208AQ9UK61 1670 aaKnown RBP9.11□□□□□ -0.95
BEST3-212ENST00000553096 NFAT5O94916 1531 aa9.1□□□□□ -0.95
BEST3-212ENST00000553096 TRPM3Q9HCF6 1732 aaPredicted RBP9.1□□□□□ -0.95
BEST3-212ENST00000553096 SOX12O15370 315 aa9.1□□□□□ -0.95
BEST3-212ENST00000553096 VAMP4O75379 141 aa9.1□□□□□ -0.95
BEST3-212ENST00000553096 SULT6B1Q6IMI4 303 aa9.1□□□□□ -0.95
BEST3-212ENST00000553096 TMEM57Q8N5G2 664 aa9.1□□□□□ -0.95
BEST3-212ENST00000553096 IFT57Q9NWB7 429 aa9.1□□□□□ -0.95
BEST3-212ENST00000553096 LTBP4Q8N2S1 1624 aa9.1□□□□□ -0.95
BEST3-212ENST00000553096 PHRF1Q9P1Y6 1649 aaKnown RBP9.1□□□□□ -0.95
BEST3-212ENST00000553096 SBNO1A3KN83 1393 aa9.1□□□□□ -0.95
BEST3-212ENST00000553096 TPM2P07951 284 aa9.1□□□□□ -0.95
BEST3-212ENST00000553096 HSP90AB1P08238 724 aaKnown RBP9.1□□□□□ -0.95
BEST3-212ENST00000553096 ITPRIPQ8IWB1 547 aa9.1□□□□□ -0.95
BEST3-212ENST00000553096 ARHGEF10O15013 1369 aa9.09□□□□□ -0.95
BEST3-212ENST00000553096 GOLGA6L22H0YM25 854 aa9.09□□□□□ -0.95
BEST3-212ENST00000553096 ALDH1L2Q3SY69 923 aa9.09□□□□□ -0.95
BEST3-212ENST00000553096 RGPD5Q99666 1765 aa9.09□□□□□ -0.95
BEST3-212ENST00000553096 NUCB1Q02818 461 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms