RNA–Protein interactions for RNA: ENST00000552896.1

TRAFD1-209, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS ALT2 TSL 3

Gene TRAFD1, Length 983 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-209ENST00000552896 PARD3Q8TEW0 1356 aa15.89■□□□□ 0.13
TRAFD1-209ENST00000552896 EIF4A2Q14240 407 aaKnown RBP15.89■□□□□ 0.13
TRAFD1-209ENST00000552896 KAT6BQ8WYB5 2073 aa15.89■□□□□ 0.13
TRAFD1-209ENST00000552896 RREB1Q92766 1687 aa15.88■□□□□ 0.13
TRAFD1-209ENST00000552896 IGSF1Q8N6C5 1336 aa15.88■□□□□ 0.13
TRAFD1-209ENST00000552896 BTAF1O14981 1849 aa15.87■□□□□ 0.13
TRAFD1-209ENST00000552896 FAM196AQ6ZSG2 479 aa15.87■□□□□ 0.13
TRAFD1-209ENST00000552896 USHBP1Q8N6Y0 703 aa15.87■□□□□ 0.13
TRAFD1-209ENST00000552896 TOGARAM1Q9Y4F4 1720 aa15.86■□□□□ 0.13
TRAFD1-209ENST00000552896 MTHFSP49914 203 aa15.86■□□□□ 0.13
TRAFD1-209ENST00000552896 DDX10Q13206 875 aaKnown RBP15.86■□□□□ 0.13
TRAFD1-209ENST00000552896 CCDC125Q86Z20 511 aa15.86■□□□□ 0.13
TRAFD1-209ENST00000552896 ITGB4P16144 1822 aa15.86■□□□□ 0.13
TRAFD1-209ENST00000552896 EXOC5O00471 708 aa15.85■□□□□ 0.13
TRAFD1-209ENST00000552896 FAM182BQ5T319 152 aa15.85■□□□□ 0.13
TRAFD1-209ENST00000552896 RAPGEF4Q8WZA2 1011 aa15.85■□□□□ 0.13
TRAFD1-209ENST00000552896 EYA1Q99502 592 aa15.85■□□□□ 0.13
TRAFD1-209ENST00000552896 KDRP35968 1356 aa15.85■□□□□ 0.13
TRAFD1-209ENST00000552896 CNGB1Q14028 1251 aaPredicted RBP15.84■□□□□ 0.13
TRAFD1-209ENST00000552896 MARCH10Q8NA82 808 aaPredicted RBP15.84■□□□□ 0.13
TRAFD1-209ENST00000552896 NUP188Q5SRE5 1749 aa15.83■□□□□ 0.13
TRAFD1-209ENST00000552896 ZNF316A6NFI3 1004 aaPredicted RBP15.83■□□□□ 0.12
TRAFD1-209ENST00000552896 TATP17735 454 aaPredicted RBP15.82■□□□□ 0.12
TRAFD1-209ENST00000552896 PPP2R1AP30153 589 aa15.82■□□□□ 0.12
TRAFD1-209ENST00000552896 IL13P35225 146 aa15.82■□□□□ 0.12
TRAFD1-209ENST00000552896 PCDH11XQ9BZA7 1347 aa15.81■□□□□ 0.12
TRAFD1-209ENST00000552896 PCDH11YQ9BZA8 1340 aa15.81■□□□□ 0.12
TRAFD1-209ENST00000552896 SCN11AQ9UI33 1791 aa15.8■□□□□ 0.12
TRAFD1-209ENST00000552896 SF3B2Q13435 895 aaKnown RBP15.8■□□□□ 0.12
TRAFD1-209ENST00000552896 ZCRB1Q8TBF4 217 aaKnown RBP15.8■□□□□ 0.12
TRAFD1-209ENST00000552896 RNF39Q9H2S5 420 aa15.8■□□□□ 0.12
TRAFD1-209ENST00000552896 DIAPH1O60610 1272 aaKnown RBP15.79■□□□□ 0.12
TRAFD1-209ENST00000552896 RALBP1Q15311 655 aa15.79■□□□□ 0.12
TRAFD1-209ENST00000552896 CFAP53Q96M91 514 aa15.79■□□□□ 0.12
TRAFD1-209ENST00000552896 LY75O60449 1722 aa15.79■□□□□ 0.12
TRAFD1-209ENST00000552896 TRIM37O94972 964 aa15.78■□□□□ 0.12
TRAFD1-209ENST00000552896 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.78■□□□□ 0.124e-6■□□□□ 11.2
TRAFD1-209ENST00000552896 ADAMTS7Q9UKP4 1686 aa15.77■□□□□ 0.12
TRAFD1-209ENST00000552896 BAG6P46379 1132 aa15.76■□□□□ 0.11
TRAFD1-209ENST00000552896 NCBP3Q53F19 620 aaKnown RBP15.76■□□□□ 0.11
TRAFD1-209ENST00000552896 AEBP1Q8IUX7 1158 aa15.76■□□□□ 0.11
TRAFD1-209ENST00000552896 SPG7Q9UQ90 795 aa15.76■□□□□ 0.11
TRAFD1-209ENST00000552896 SULT6B1Q6IMI4 303 aa15.75■□□□□ 0.11
TRAFD1-209ENST00000552896 DDX54Q8TDD1 881 aaKnown RBP15.75■□□□□ 0.11
TRAFD1-209ENST00000552896 BCL11BQ9C0K0 894 aaPredicted RBP15.75■□□□□ 0.11
TRAFD1-209ENST00000552896 DLG5Q8TDM6 1919 aa15.74■□□□□ 0.11
TRAFD1-209ENST00000552896 MYBBP1AQ9BQG0 1328 aaKnown RBP15.74■□□□□ 0.11
TRAFD1-209ENST00000552896 CYP27B1O15528 508 aa15.74■□□□□ 0.11
TRAFD1-209ENST00000552896 PAPPAQ13219 1627 aa15.72■□□□□ 0.11
TRAFD1-209ENST00000552896 AMOTQ4VCS5 1084 aa15.72■□□□□ 0.11
TRAFD1-209ENST00000552896 DEFB132Q7Z7B7 95 aa15.72■□□□□ 0.11
TRAFD1-209ENST00000552896 TAF1LQ8IZX4 1826 aa15.72■□□□□ 0.11
TRAFD1-209ENST00000552896 SIPA1L3O60292 1781 aaPredicted RBP15.72■□□□□ 0.11
TRAFD1-209ENST00000552896 APBA3O96018 575 aa15.71■□□□□ 0.11
TRAFD1-209ENST00000552896 PLEKHO1Q53GL0 409 aaPredicted RBP15.71■□□□□ 0.11
TRAFD1-209ENST00000552896 PRKRIP1Q9H875 184 aaPredicted RBP15.71■□□□□ 0.11
TRAFD1-209ENST00000552896 NUDCQ9Y266 331 aa15.71■□□□□ 0.11
TRAFD1-209ENST00000552896 MRC1P22897 1456 aa15.71■□□□□ 0.1
TRAFD1-209ENST00000552896 C5P01031 1676 aa15.7■□□□□ 0.1
TRAFD1-209ENST00000552896 U2SURPO15042 1029 aaKnown RBP15.7■□□□□ 0.1
TRAFD1-209ENST00000552896 HMOX1P09601 288 aa15.7■□□□□ 0.1
TRAFD1-209ENST00000552896 PHKG2P15735 406 aa15.7■□□□□ 0.1
TRAFD1-209ENST00000552896 NKX1-1Q15270 411 aaPredicted RBP15.7■□□□□ 0.1
TRAFD1-209ENST00000552896 IFNL2Q8IZJ0 200 aa15.7■□□□□ 0.1
TRAFD1-209ENST00000552896 ACSBG1Q96GR2 724 aa15.7■□□□□ 0.1
TRAFD1-209ENST00000552896 QSER1Q2KHR3 1735 aa15.7■□□□□ 0.1
TRAFD1-209ENST00000552896 ZNF831Q5JPB2 1677 aa15.7■□□□□ 0.1
TRAFD1-209ENST00000552896 KDM6AO15550 1401 aaPredicted RBP15.69■□□□□ 0.1
TRAFD1-209ENST00000552896 KCNQ2O43526 872 aa15.69■□□□□ 0.1
TRAFD1-209ENST00000552896 EN1Q05925 392 aaPredicted RBP15.69■□□□□ 0.1
TRAFD1-209ENST00000552896 ZNF530Q6P9A1 599 aaPredicted RBP15.69■□□□□ 0.1
TRAFD1-209ENST00000552896 PTF1AQ7RTS3 328 aa15.69■□□□□ 0.1
TRAFD1-209ENST00000552896 CAMKK2Q96RR4 588 aa15.69■□□□□ 0.1
TRAFD1-209ENST00000552896 PLSCR1O15162 318 aa15.68■□□□□ 0.1
TRAFD1-209ENST00000552896 TUBGCP6Q96RT7 1819 aa15.68■□□□□ 0.1
TRAFD1-209ENST00000552896 CICQ96RK0 1608 aaPredicted RBP15.68■□□□□ 0.1
TRAFD1-209ENST00000552896 HSP90AB1P08238 724 aaKnown RBP15.67■□□□□ 0.1
TRAFD1-209ENST00000552896 RSPH6AQ9H0K4 717 aa15.67■□□□□ 0.1
TRAFD1-209ENST00000552896 EZH2Q15910 746 aaKnown RBP15.66■□□□□ 0.1
TRAFD1-209ENST00000552896 C1orf141Q5JVX7 400 aa15.66■□□□□ 0.1
TRAFD1-209ENST00000552896 UBR2Q8IWV8 1755 aa15.66■□□□□ 0.1
TRAFD1-209ENST00000552896 U2AF1L5P0DN76 240 aaPredicted RBP15.65■□□□□ 0.1
TRAFD1-209ENST00000552896 PRIM1P49642 420 aaKnown RBP15.65■□□□□ 0.1
TRAFD1-209ENST00000552896 U2AF1Q01081 240 aaKnown RBP eCLIP15.65■□□□□ 0.1
TRAFD1-209ENST00000552896 SYTL4Q96C24 671 aaPredicted RBP15.65■□□□□ 0.1
TRAFD1-209ENST00000552896 DCAF5Q96JK2 942 aa15.65■□□□□ 0.1
TRAFD1-209ENST00000552896 COL5A3P25940 1745 aaPredicted RBP15.65■□□□□ 0.1
TRAFD1-209ENST00000552896 FCHSD2O94868 740 aa15.64■□□□□ 0.09
TRAFD1-209ENST00000552896 PRKAR2BP31323 418 aa15.64■□□□□ 0.09
TRAFD1-209ENST00000552896 AKAP4Q5JQC9 854 aa15.64■□□□□ 0.09
TRAFD1-209ENST00000552896 MAP3K5Q99683 1374 aa15.63■□□□□ 0.09
TRAFD1-209ENST00000552896 CASZ1Q86V15 1759 aa15.63■□□□□ 0.09
TRAFD1-209ENST00000552896 MTHFSDQ2M296 383 aaKnown RBP15.62■□□□□ 0.09
TRAFD1-209ENST00000552896 GAS2L2Q8NHY3 880 aa15.62■□□□□ 0.09
TRAFD1-209ENST00000552896 ERVV-2B6SEH9 535 aa15.61■□□□□ 0.09
TRAFD1-209ENST00000552896 C1QBPQ07021 282 aaKnown RBP15.61■□□□□ 0.09
TRAFD1-209ENST00000552896 TMOD3Q9NYL9 352 aa15.61■□□□□ 0.09
TRAFD1-209ENST00000552896 PALLDQ8WX93 1383 aa15.61■□□□□ 0.09
TRAFD1-209ENST00000552896 C4BP0C0L5 1744 aa15.6■□□□□ 0.09
TRAFD1-209ENST00000552896 TJP1Q07157 1748 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms