RNA–Protein interactions for RNA: ENST00000552829.2

SUPT16H-202, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 2

Gene SUPT16H, Length 669 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-202ENST00000552829 GPBP1L1Q9HC44 474 aaPredicted RBP16.43■□□□□ 0.22
SUPT16H-202ENST00000552829 COL23A1Q86Y22 540 aaPredicted RBP16.41■□□□□ 0.22
SUPT16H-202ENST00000552829 CD2APQ9Y5K6 639 aa16.41■□□□□ 0.22
SUPT16H-202ENST00000552829 ANKRD36BQ8N2N9 1353 aa16.4■□□□□ 0.22
SUPT16H-202ENST00000552829 PRIM1P49642 420 aaKnown RBP16.4■□□□□ 0.22
SUPT16H-202ENST00000552829 DDX54Q8TDD1 881 aaKnown RBP16.39■□□□□ 0.21
SUPT16H-202ENST00000552829 DOT1LQ8TEK3 1739 aa16.39■□□□□ 0.21
SUPT16H-202ENST00000552829 SBNO2Q9Y2G9 1366 aa16.38■□□□□ 0.21
SUPT16H-202ENST00000552829 NME9Q86XW9 330 aa16.38■□□□□ 0.21
SUPT16H-202ENST00000552829 FAM208AQ9UK61 1670 aaKnown RBP16.37■□□□□ 0.21
SUPT16H-202ENST00000552829 CD163L1Q9NR16 1453 aa16.37■□□□□ 0.21
SUPT16H-202ENST00000552829 KIF3CO14782 793 aa16.36■□□□□ 0.21
SUPT16H-202ENST00000552829 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.36■□□□□ 0.21
SUPT16H-202ENST00000552829 CCNL1Q9UK58 526 aaPredicted RBP16.36■□□□□ 0.21
SUPT16H-202ENST00000552829 MSL1Q68DK7 614 aa16.35■□□□□ 0.21
SUPT16H-202ENST00000552829 DNAJC5GQ8N7S2 189 aa16.35■□□□□ 0.21
SUPT16H-202ENST00000552829 IP6K1Q92551 441 aa16.35■□□□□ 0.21
SUPT16H-202ENST00000552829 TAF1LQ8IZX4 1826 aa16.35■□□□□ 0.21
SUPT16H-202ENST00000552829 ZNF526Q8TF50 670 aaPredicted RBP16.34■□□□□ 0.21
SUPT16H-202ENST00000552829 SYTL4Q96C24 671 aaPredicted RBP16.34■□□□□ 0.21
SUPT16H-202ENST00000552829 C5P01031 1676 aa16.32■□□□□ 0.2
SUPT16H-202ENST00000552829 RGPD2P0DJD1 1756 aa16.32■□□□□ 0.2
SUPT16H-202ENST00000552829 APLP1P51693 650 aa16.31■□□□□ 0.2
SUPT16H-202ENST00000552829 ZCRB1Q8TBF4 217 aaKnown RBP16.31■□□□□ 0.2
SUPT16H-202ENST00000552829 L3MBTL2Q969R5 705 aa16.31■□□□□ 0.2
SUPT16H-202ENST00000552829 FLAD1Q8NFF5 587 aa16.3■□□□□ 0.2
SUPT16H-202ENST00000552829 EDC4Q6P2E9 1401 aaKnown RBP16.29■□□□□ 0.2
SUPT16H-202ENST00000552829 USP47Q96K76 1375 aa16.29■□□□□ 0.2
SUPT16H-202ENST00000552829 CICQ96RK0 1608 aaPredicted RBP16.29■□□□□ 0.2
SUPT16H-202ENST00000552829 MEGF6O75095 1541 aa16.29■□□□□ 0.2
SUPT16H-202ENST00000552829 IGSF1Q8N6C5 1336 aa16.28■□□□□ 0.2
SUPT16H-202ENST00000552829 LTV1Q96GA3 475 aaPredicted RBP16.28■□□□□ 0.2
SUPT16H-202ENST00000552829 TOGARAM1Q9Y4F4 1720 aa16.28■□□□□ 0.2
SUPT16H-202ENST00000552829 UBR3Q6ZT12 1888 aa16.27■□□□□ 0.2
SUPT16H-202ENST00000552829 HMGB2P26583 209 aaKnown RBP16.26■□□□□ 0.19
SUPT16H-202ENST00000552829 AMIGO3Q86WK7 504 aa16.26■□□□□ 0.19
SUPT16H-202ENST00000552829 SLC12A5Q9H2X9 1139 aa16.26■□□□□ 0.19
SUPT16H-202ENST00000552829 FOXD4L1Q9NU39 408 aa16.26■□□□□ 0.19
SUPT16H-202ENST00000552829 ROCK2O75116 1388 aaKnown RBP16.26■□□□□ 0.19
SUPT16H-202ENST00000552829 HOXC9P31274 260 aa16.25■□□□□ 0.19
SUPT16H-202ENST00000552829 C4BP0C0L5 1744 aa16.25■□□□□ 0.19
SUPT16H-202ENST00000552829 MAP3K19Q56UN5 1328 aa16.24■□□□□ 0.19
SUPT16H-202ENST00000552829 TOMM70O94826 608 aa16.24■□□□□ 0.19
SUPT16H-202ENST00000552829 HDGFL2Q7Z4V5 671 aaPredicted RBP16.24■□□□□ 0.19
SUPT16H-202ENST00000552829 CGNL1Q0VF96 1302 aa16.23■□□□□ 0.19
SUPT16H-202ENST00000552829 A0A1W2PP64 1363 aa16.23■□□□□ 0.19
SUPT16H-202ENST00000552829 ITGB4P16144 1822 aa16.22■□□□□ 0.19
SUPT16H-202ENST00000552829 KIF13BQ9NQT8 1826 aa16.22■□□□□ 0.19
SUPT16H-202ENST00000552829 PALLDQ8WX93 1383 aa16.22■□□□□ 0.19
SUPT16H-202ENST00000552829 WDR90Q96KV7 1748 aa16.22■□□□□ 0.19
SUPT16H-202ENST00000552829 KIAA1551Q9HCM1 1747 aa16.22■□□□□ 0.19
SUPT16H-202ENST00000552829 MAP2P11137 1827 aaKnown RBP16.22■□□□□ 0.19
SUPT16H-202ENST00000552829 NBPF6Q5VWK0 638 aa16.21■□□□□ 0.19
SUPT16H-202ENST00000552829 TMC1Q8TDI8 760 aa16.21■□□□□ 0.19
SUPT16H-202ENST00000552829 NBPF4Q96M43 638 aa16.21■□□□□ 0.19
SUPT16H-202ENST00000552829 TERF2IPQ9NYB0 399 aa16.21■□□□□ 0.19
SUPT16H-202ENST00000552829 WWC3Q9ULE0 1092 aa16.21■□□□□ 0.19
SUPT16H-202ENST00000552829 FBLN1P23142 703 aa16.2■□□□□ 0.18
SUPT16H-202ENST00000552829 COL13A1Q5TAT6 717 aaPredicted RBP16.2■□□□□ 0.18
SUPT16H-202ENST00000552829 JMYQ8N9B5 988 aa16.2■□□□□ 0.18
SUPT16H-202ENST00000552829 PUS7Q96PZ0 661 aaKnown RBP16.2■□□□□ 0.18
SUPT16H-202ENST00000552829 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.19■□□□□ 0.18
SUPT16H-202ENST00000552829 SMIM5Q71RC9 77 aa16.19■□□□□ 0.18
SUPT16H-202ENST00000552829 AMPHP49418 695 aa16.18■□□□□ 0.18
SUPT16H-202ENST00000552829 AK7Q96M32 723 aa16.18■□□□□ 0.18
SUPT16H-202ENST00000552829 NSD3Q9BZ95 1437 aa16.18■□□□□ 0.18
SUPT16H-202ENST00000552829 RTL1A6NKG5 1358 aa16.17■□□□□ 0.18
SUPT16H-202ENST00000552829 SSFA2P28290 1259 aa16.17■□□□□ 0.18
SUPT16H-202ENST00000552829 SMARCC1Q92922 1105 aaPredicted RBP16.17■□□□□ 0.18
SUPT16H-202ENST00000552829 KLRG1Q96E93 195 aa16.17■□□□□ 0.18
SUPT16H-202ENST00000552829 NMRK2Q9NPI5 230 aa16.17■□□□□ 0.18
SUPT16H-202ENST00000552829 PXDNLA1KZ92 1463 aa16.16■□□□□ 0.18
SUPT16H-202ENST00000552829 N4BP2Q86UW6 1770 aaPredicted RBP16.16■□□□□ 0.18
SUPT16H-202ENST00000552829 CYP27B1O15528 508 aa16.16■□□□□ 0.18
SUPT16H-202ENST00000552829 MPRIPQ6WCQ1 1025 aa16.16■□□□□ 0.18
SUPT16H-202ENST00000552829 USHBP1Q8N6Y0 703 aa16.16■□□□□ 0.18
SUPT16H-202ENST00000552829 RBM46Q8TBY0 533 aaKnown RBP16.16■□□□□ 0.18
SUPT16H-202ENST00000552829 RAPGEF4Q8WZA2 1011 aa16.16■□□□□ 0.18
SUPT16H-202ENST00000552829 COG3Q96JB2 828 aa16.16■□□□□ 0.18
SUPT16H-202ENST00000552829 TATP17735 454 aaPredicted RBP16.15■□□□□ 0.18
SUPT16H-202ENST00000552829 BRCA1P38398 1863 aaKnown RBP16.15■□□□□ 0.18
SUPT16H-202ENST00000552829 PCNTO95613 3336 aa16.15■□□□□ 0.18
SUPT16H-202ENST00000552829 PCDH11XQ9BZA7 1347 aa16.15■□□□□ 0.18
SUPT16H-202ENST00000552829 PCDH11YQ9BZA8 1340 aa16.15■□□□□ 0.18
SUPT16H-202ENST00000552829 LINC00116Q8NCU8 138 aa16.14■□□□□ 0.17
SUPT16H-202ENST00000552829 SIN3AQ96ST3 1273 aa16.14■□□□□ 0.17
SUPT16H-202ENST00000552829 PHF14O94880 888 aa16.13■□□□□ 0.17
SUPT16H-202ENST00000552829 PRELPP51888 382 aa16.13■□□□□ 0.17
SUPT16H-202ENST00000552829 TGFB2P61812 414 aa16.13■□□□□ 0.17
SUPT16H-202ENST00000552829 PIGBQ92521 554 aa16.13■□□□□ 0.17
SUPT16H-202ENST00000552829 PKD1L3Q7Z443 1732 aa16.12■□□□□ 0.17
SUPT16H-202ENST00000552829 HTRA3P83110 453 aa16.12■□□□□ 0.17
SUPT16H-202ENST00000552829 NKX1-1Q15270 411 aaPredicted RBP16.12■□□□□ 0.17
SUPT16H-202ENST00000552829 ARFGEF1Q9Y6D6 1849 aa16.11■□□□□ 0.17
SUPT16H-202ENST00000552829 LOC102724428A0A0B4J2F2 783 aa16.11■□□□□ 0.17
SUPT16H-202ENST00000552829 MMP10P09238 476 aa16.11■□□□□ 0.17
SUPT16H-202ENST00000552829 SIK1P57059 783 aa16.11■□□□□ 0.17
SUPT16H-202ENST00000552829 FSTL1Q12841 308 aa16.11■□□□□ 0.17
SUPT16H-202ENST00000552829 RRS1Q15050 365 aaKnown RBP16.11■□□□□ 0.17
SUPT16H-202ENST00000552829 A0A0G2JLW4 131 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms