RNA–Protein interactions for RNA: ENST00000552812.1

CACNB3-224, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

Gene CACNB3, Length 1,712 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-224ENST00000552812 SPDYE4A6NLX3 237 aa14.74□□□□□ -0.05
CACNB3-224ENST00000552812 RIPK4P57078 832 aa14.74□□□□□ -0.05
CACNB3-224ENST00000552812 NFE2L2Q16236 605 aa14.74□□□□□ -0.05
CACNB3-224ENST00000552812 RCAN3Q9UKA8 241 aa14.74□□□□□ -0.05
CACNB3-224ENST00000552812 PHACTR3Q96KR7 559 aa14.73□□□□□ -0.05
CACNB3-224ENST00000552812 EYA1Q99502 592 aa14.73□□□□□ -0.05
CACNB3-224ENST00000552812 TRIM35Q9UPQ4 493 aa14.73□□□□□ -0.05
CACNB3-224ENST00000552812 AEBP1Q8IUX7 1158 aa14.72□□□□□ -0.05
CACNB3-224ENST00000552812 PHF12Q96QT6 1004 aa14.72□□□□□ -0.05
CACNB3-224ENST00000552812 IL16Q14005 1332 aa14.72□□□□□ -0.05
CACNB3-224ENST00000552812 LMOD3Q0VAK6 560 aa14.72□□□□□ -0.05
CACNB3-224ENST00000552812 POTEGQ6S5H5 508 aa14.72□□□□□ -0.05
CACNB3-224ENST00000552812 FKBP8Q14318 412 aa14.71□□□□□ -0.05
CACNB3-224ENST00000552812 CPDO75976 1380 aa14.7□□□□□ -0.06
CACNB3-224ENST00000552812 ERICH6BQ5W0A0 696 aa14.7□□□□□ -0.06
CACNB3-224ENST00000552812 MYH16Q9H6N6 1097 aa14.7□□□□□ -0.06
CACNB3-224ENST00000552812 DLG5Q8TDM6 1919 aa14.7□□□□□ -0.06
CACNB3-224ENST00000552812 ROBO1Q9Y6N7 1651 aa14.7□□□□□ -0.06
CACNB3-224ENST00000552812 CALD1Q05682 793 aaKnown RBP14.69□□□□□ -0.06
CACNB3-224ENST00000552812 AHDC1Q5TGY3 1603 aaPredicted RBP14.69□□□□□ -0.06
CACNB3-224ENST00000552812 NCAPD2Q15021 1401 aa14.68□□□□□ -0.06
CACNB3-224ENST00000552812 CAMTA1Q9Y6Y1 1673 aa14.68□□□□□ -0.06
CACNB3-224ENST00000552812 COL18A1P39060 1754 aa14.67□□□□□ -0.06
CACNB3-224ENST00000552812 ZBTB7CA1YPR0 619 aa14.67□□□□□ -0.06
CACNB3-224ENST00000552812 LTV1Q96GA3 475 aaPredicted RBP14.67□□□□□ -0.06
CACNB3-224ENST00000552812 ZC3H6P61129 1189 aaKnown RBP14.66□□□□□ -0.06
CACNB3-224ENST00000552812 PELP1Q8IZL8 1130 aaKnown RBP14.66□□□□□ -0.06
CACNB3-224ENST00000552812 ABCA3Q99758 1704 aa14.66□□□□□ -0.06
CACNB3-224ENST00000552812 ERBB3P21860 1342 aa14.66□□□□□ -0.06
CACNB3-224ENST00000552812 PLEKHG5O94827 1062 aa14.66□□□□□ -0.06
CACNB3-224ENST00000552812 RRP1P56182 461 aaKnown RBP14.66□□□□□ -0.06
CACNB3-224ENST00000552812 GAS2L2Q8NHY3 880 aa14.66□□□□□ -0.06
CACNB3-224ENST00000552812 CABLES1Q8TDN4 633 aa14.66□□□□□ -0.06
CACNB3-224ENST00000552812 FAM208AQ9UK61 1670 aaKnown RBP14.66□□□□□ -0.06
CACNB3-224ENST00000552812 CT47B1P0C2W7 299 aaPredicted RBP14.65□□□□□ -0.06
CACNB3-224ENST00000552812 NBPF6Q5VWK0 638 aa14.65□□□□□ -0.06
CACNB3-224ENST00000552812 ANKRD24Q8TF21 1146 aa14.65□□□□□ -0.06
CACNB3-224ENST00000552812 NBPF4Q96M43 638 aa14.65□□□□□ -0.06
CACNB3-224ENST00000552812 PCDH10Q9P2E7 1040 aa14.65□□□□□ -0.06
CACNB3-224ENST00000552812 AXIN2Q9Y2T1 843 aa14.65□□□□□ -0.06
CACNB3-224ENST00000552812 RGPD5Q99666 1765 aa14.65□□□□□ -0.06
CACNB3-224ENST00000552812 LMO7Q8WWI1 1683 aa14.65□□□□□ -0.07
CACNB3-224ENST00000552812 FANCIQ9NVI1 1328 aa14.64□□□□□ -0.07
CACNB3-224ENST00000552812 KIAA0232Q92628 1395 aa14.64□□□□□ -0.07
CACNB3-224ENST00000552812 RGPD2P0DJD1 1756 aa14.64□□□□□ -0.07
CACNB3-224ENST00000552812 LRRC59Q96AG4 307 aaKnown RBP14.63□□□□□ -0.07
CACNB3-224ENST00000552812 MTHFSDQ2M296 383 aaKnown RBP14.63□□□□□ -0.07
CACNB3-224ENST00000552812 IFT57Q9NWB7 429 aa14.63□□□□□ -0.07
CACNB3-224ENST00000552812 HTATSF1O43719 755 aaKnown RBP14.62□□□□□ -0.07
CACNB3-224ENST00000552812 TOM1O60784 492 aa14.62□□□□□ -0.07
CACNB3-224ENST00000552812 GNAI1P63096 354 aa14.62□□□□□ -0.07
CACNB3-224ENST00000552812 PLEKHG2Q9H7P9 1386 aa14.62□□□□□ -0.07
CACNB3-224ENST00000552812 COL22A1Q8NFW1 1626 aaPredicted RBP14.61□□□□□ -0.07
CACNB3-224ENST00000552812 ZNF853P0CG23 659 aa14.61□□□□□ -0.07
CACNB3-224ENST00000552812 HAP1P54257 671 aaPredicted RBP14.61□□□□□ -0.07
CACNB3-224ENST00000552812 IRX6P78412 446 aaPredicted RBP14.61□□□□□ -0.07
CACNB3-224ENST00000552812 USHBP1Q8N6Y0 703 aa14.61□□□□□ -0.07
CACNB3-224ENST00000552812 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.61□□□□□ -0.07
CACNB3-224ENST00000552812 CFAP44Q96MT7 982 aa14.61□□□□□ -0.07
CACNB3-224ENST00000552812 TSR2Q969E8 191 aaKnown RBP14.6□□□□□ -0.07
CACNB3-224ENST00000552812 PRDM11Q9NQV5 511 aa14.6□□□□□ -0.07
CACNB3-224ENST00000552812 FAM83GA6ND36 823 aa14.59□□□□□ -0.07
CACNB3-224ENST00000552812 ASTLQ6HA08 431 aaPredicted RBP14.59□□□□□ -0.07
CACNB3-224ENST00000552812 RTF1Q92541 710 aaKnown RBP14.59□□□□□ -0.07
CACNB3-224ENST00000552812 THUMPD2Q9BTF0 503 aaKnown RBP14.59□□□□□ -0.07
CACNB3-224ENST00000552812 COL16A1Q07092 1604 aaPredicted RBP14.59□□□□□ -0.07
CACNB3-224ENST00000552812 MAP3K5Q99683 1374 aa14.58□□□□□ -0.07
CACNB3-224ENST00000552812 GNAT3A8MTJ3 354 aa14.58□□□□□ -0.07
CACNB3-224ENST00000552812 CHRNA2Q15822 529 aa14.58□□□□□ -0.07
CACNB3-224ENST00000552812 AMOTQ4VCS5 1084 aa14.58□□□□□ -0.07
CACNB3-224ENST00000552812 PHLPP1O60346 1717 aa14.58□□□□□ -0.08
CACNB3-224ENST00000552812 LRRC37A3O60309 1634 aa14.58□□□□□ -0.08
CACNB3-224ENST00000552812 EXOSC9Q06265 439 aaKnown RBP14.58□□□□□ -0.08
CACNB3-224ENST00000552812 ZNF428Q96B54 188 aa14.58□□□□□ -0.08
CACNB3-224ENST00000552812 METRNQ9UJH8 293 aa14.58□□□□□ -0.08
CACNB3-224ENST00000552812 CRB1P82279 1406 aa14.57□□□□□ -0.08
CACNB3-224ENST00000552812 MNX1P50219 401 aaPredicted RBP14.57□□□□□ -0.08
CACNB3-224ENST00000552812 RARSP54136 660 aaKnown RBP14.57□□□□□ -0.08
CACNB3-224ENST00000552812 DCTN1Q14203 1278 aa14.57□□□□□ -0.08
CACNB3-224ENST00000552812 PLEKHO1Q53GL0 409 aaPredicted RBP14.57□□□□□ -0.08
CACNB3-224ENST00000552812 CSB-PGBD3P0DP91 1061 aa14.56□□□□□ -0.08
CACNB3-224ENST00000552812 MCM10Q7L590 875 aa14.56□□□□□ -0.08
CACNB3-224ENST00000552812 SLC39A7Q92504 469 aa14.56□□□□□ -0.08
CACNB3-224ENST00000552812 MBIPQ9NS73 344 aa14.56□□□□□ -0.08
CACNB3-224ENST00000552812 NLRP2Q9NX02 1062 aa14.56□□□□□ -0.08
CACNB3-224ENST00000552812 COL5A2P05997 1499 aaPredicted RBP14.56□□□□□ -0.08
CACNB3-224ENST00000552812 C7P10643 843 aa14.55□□□□□ -0.08
CACNB3-224ENST00000552812 PPP4R2Q9NY27 417 aa14.55□□□□□ -0.08
CACNB3-224ENST00000552812 LAS1LQ9Y4W2 734 aaKnown RBP14.55□□□□□ -0.08
CACNB3-224ENST00000552812 WDR17Q8IZU2 1322 aa14.55□□□□□ -0.08
CACNB3-224ENST00000552812 CHL1O00533 1208 aa14.55□□□□□ -0.08
CACNB3-224ENST00000552812 BCAR3O75815 825 aa14.54□□□□□ -0.08
CACNB3-224ENST00000552812 MAMSTRQ6ZN01 415 aa14.54□□□□□ -0.08
CACNB3-224ENST00000552812 RAPGEF4Q8WZA2 1011 aa14.54□□□□□ -0.08
CACNB3-224ENST00000552812 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.54□□□□□ -0.08
CACNB3-224ENST00000552812 COL14A1Q05707 1796 aaKnown RBP14.53□□□□□ -0.08
CACNB3-224ENST00000552812 PLIN1O60240 522 aa14.53□□□□□ -0.08
CACNB3-224ENST00000552812 AKAP4Q5JQC9 854 aa14.53□□□□□ -0.08
CACNB3-224ENST00000552812 BABAM1Q9NWV8 329 aa14.53□□□□□ -0.08
CACNB3-224ENST00000552812 CEMIPQ8WUJ3 1361 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms