RNA–Protein interactions for RNA: ENST00000552801.6

TMEM116-217, Transcript of transmembrane protein 116, humanhuman

TSL 5

Gene TMEM116, Length 1,397 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-217ENST00000552801 BCL9O00512 1426 aa12.2□□□□□ -0.46
TMEM116-217ENST00000552801 EDC4Q6P2E9 1401 aaKnown RBP12.2□□□□□ -0.46
TMEM116-217ENST00000552801 LTV1Q96GA3 475 aaPredicted RBP12.2□□□□□ -0.46
TMEM116-217ENST00000552801 PCGF6Q9BYE7 350 aa12.2□□□□□ -0.46
TMEM116-217ENST00000552801 ANO8Q9HCE9 1232 aaPredicted RBP12.2□□□□□ -0.46
TMEM116-217ENST00000552801 AMPHP49418 695 aa12.19□□□□□ -0.46
TMEM116-217ENST00000552801 SLC15A2Q16348 729 aa12.19□□□□□ -0.46
TMEM116-217ENST00000552801 PTF1AQ7RTS3 328 aa12.19□□□□□ -0.46
TMEM116-217ENST00000552801 COG3Q96JB2 828 aa12.19□□□□□ -0.46
TMEM116-217ENST00000552801 PRKAR2AP13861 404 aaKnown RBP12.18□□□□□ -0.46
TMEM116-217ENST00000552801 POTEHQ6S545 545 aa12.18□□□□□ -0.46
TMEM116-217ENST00000552801 DDX54Q8TDD1 881 aaKnown RBP12.18□□□□□ -0.46
TMEM116-217ENST00000552801 NHSQ6T4R5 1651 aa12.18□□□□□ -0.46
TMEM116-217ENST00000552801 A0A1W2PP64 1363 aa12.18□□□□□ -0.46
TMEM116-217ENST00000552801 SYTL4Q96C24 671 aaPredicted RBP12.18□□□□□ -0.46
TMEM116-217ENST00000552801 PUS7Q96PZ0 661 aaKnown RBP12.18□□□□□ -0.46
TMEM116-217ENST00000552801 MTFR1LQ9H019 292 aa12.18□□□□□ -0.46
TMEM116-217ENST00000552801 USP54Q70EL1 1684 aa12.17□□□□□ -0.46
TMEM116-217ENST00000552801 CASZ1Q86V15 1759 aa12.16□□□□□ -0.46
TMEM116-217ENST00000552801 FAM208AQ9UK61 1670 aaKnown RBP12.16□□□□□ -0.46
TMEM116-217ENST00000552801 TRIM26Q12899 539 aaPredicted RBP12.16□□□□□ -0.46
TMEM116-217ENST00000552801 IP6K1Q92551 441 aa12.16□□□□□ -0.46
TMEM116-217ENST00000552801 ST20-MTHFSA0A0A6YYL1 179 aa12.15□□□□□ -0.46
TMEM116-217ENST00000552801 CHADLQ6NUI6 762 aa12.15□□□□□ -0.46
TMEM116-217ENST00000552801 KLHL34Q8N239 644 aa12.15□□□□□ -0.46
TMEM116-217ENST00000552801 BTAF1O14981 1849 aa12.15□□□□□ -0.46
TMEM116-217ENST00000552801 CD163L1Q9NR16 1453 aa12.14□□□□□ -0.47
TMEM116-217ENST00000552801 POLD1P28340 1107 aa12.14□□□□□ -0.47
TMEM116-217ENST00000552801 TMF1P82094 1093 aa12.14□□□□□ -0.47
TMEM116-217ENST00000552801 SMG6Q86US8 1419 aaKnown RBP12.14□□□□□ -0.47
TMEM116-217ENST00000552801 MIER1Q8N108 512 aa12.14□□□□□ -0.47
TMEM116-217ENST00000552801 PDGFDQ9GZP0 370 aaPredicted RBP12.14□□□□□ -0.47
TMEM116-217ENST00000552801 MYOM1P52179 1685 aa12.13□□□□□ -0.47
TMEM116-217ENST00000552801 CDCA8Q53HL2 280 aa12.13□□□□□ -0.47
TMEM116-217ENST00000552801 ARXQ96QS3 562 aa12.13□□□□□ -0.47
TMEM116-217ENST00000552801 FHDC1Q9C0D6 1143 aaPredicted RBP12.13□□□□□ -0.47
TMEM116-217ENST00000552801 SLC27A3Q5K4L6 730 aa12.12□□□□□ -0.47
TMEM116-217ENST00000552801 TFCP2L1Q9NZI6 479 aa12.12□□□□□ -0.47
TMEM116-217ENST00000552801 HMGB2P26583 209 aaKnown RBP12.11□□□□□ -0.47
TMEM116-217ENST00000552801 HOXC9P31274 260 aa12.11□□□□□ -0.47
TMEM116-217ENST00000552801 PTGER2P43116 358 aa12.11□□□□□ -0.47
TMEM116-217ENST00000552801 ZCRB1Q8TBF4 217 aaKnown RBP12.11□□□□□ -0.47
TMEM116-217ENST00000552801 RAPGEF4Q8WZA2 1011 aa12.11□□□□□ -0.47
TMEM116-217ENST00000552801 SYT17Q9BSW7 474 aa12.11□□□□□ -0.47
TMEM116-217ENST00000552801 CREBZFQ9NS37 354 aa12.11□□□□□ -0.47
TMEM116-217ENST00000552801 MAP3K19Q56UN5 1328 aa12.11□□□□□ -0.47
TMEM116-217ENST00000552801 GPR162Q16538 588 aa12.1□□□□□ -0.47
TMEM116-217ENST00000552801 PELP1Q8IZL8 1130 aaKnown RBP12.1□□□□□ -0.47
TMEM116-217ENST00000552801 PLCD3Q8N3E9 789 aa12.1□□□□□ -0.47
TMEM116-217ENST00000552801 ANKRD36BQ8N2N9 1353 aa12.1□□□□□ -0.47
TMEM116-217ENST00000552801 PRIM1P49642 420 aaKnown RBP12.09□□□□□ -0.47
TMEM116-217ENST00000552801 SLC16A10Q8TF71 515 aa12.09□□□□□ -0.47
TMEM116-217ENST00000552801 RTL1A6NKG5 1358 aa12.09□□□□□ -0.47
TMEM116-217ENST00000552801 TATP17735 454 aaPredicted RBP12.08□□□□□ -0.48
TMEM116-217ENST00000552801 CGNL1Q0VF96 1302 aa12.08□□□□□ -0.48
TMEM116-217ENST00000552801 USP47Q96K76 1375 aa12.08□□□□□ -0.48
TMEM116-217ENST00000552801 DOT1LQ8TEK3 1739 aa12.08□□□□□ -0.48
TMEM116-217ENST00000552801 RRS1Q15050 365 aaKnown RBP12.07□□□□□ -0.48
TMEM116-217ENST00000552801 ZNF827Q17R98 1081 aa12.07□□□□□ -0.48
TMEM116-217ENST00000552801 TESK2Q96S53 571 aa12.07□□□□□ -0.48
TMEM116-217ENST00000552801 GGNBP2Q9H3C7 697 aa12.07□□□□□ -0.48
TMEM116-217ENST00000552801 CCNL1Q9UK58 526 aaPredicted RBP12.07□□□□□ -0.48
TMEM116-217ENST00000552801 CHD4Q14839 1912 aa12.07□□□□□ -0.48
TMEM116-217ENST00000552801 RGPD2P0DJD1 1756 aa12.06□□□□□ -0.48
TMEM116-217ENST00000552801 KIF20BQ96Q89 1820 aa12.06□□□□□ -0.48
TMEM116-217ENST00000552801 PPM1GO15355 546 aaPredicted RBP12.05□□□□□ -0.48
TMEM116-217ENST00000552801 FBLN1P23142 703 aa12.05□□□□□ -0.48
TMEM116-217ENST00000552801 USHBP1Q8N6Y0 703 aa12.05□□□□□ -0.48
TMEM116-217ENST00000552801 LRRC4BQ9NT99 713 aa12.05□□□□□ -0.48
TMEM116-217ENST00000552801 PAPPAQ13219 1627 aa12.05□□□□□ -0.48
TMEM116-217ENST00000552801 PCDH11XQ9BZA7 1347 aa12.05□□□□□ -0.48
TMEM116-217ENST00000552801 PCDH11YQ9BZA8 1340 aa12.05□□□□□ -0.48
TMEM116-217ENST00000552801 VASPP50552 380 aaPredicted RBP12.05□□□□□ -0.48
TMEM116-217ENST00000552801 POLR3GLQ9BT43 218 aa12.05□□□□□ -0.48
TMEM116-217ENST00000552801 FYB1O15117 783 aa12.04□□□□□ -0.48
TMEM116-217ENST00000552801 KCNQ4P56696 695 aa12.04□□□□□ -0.48
TMEM116-217ENST00000552801 FARP1Q9Y4F1 1045 aaPredicted RBP12.04□□□□□ -0.48
TMEM116-217ENST00000552801 QSER1Q2KHR3 1735 aa12.04□□□□□ -0.48
TMEM116-217ENST00000552801 MEGF6O75095 1541 aa12.03□□□□□ -0.48
TMEM116-217ENST00000552801 FLT4P35916 1363 aa12.03□□□□□ -0.48
TMEM116-217ENST00000552801 NBPF6Q5VWK0 638 aa12.03□□□□□ -0.48
TMEM116-217ENST00000552801 ZNF784Q8NCA9 323 aaPredicted RBP12.03□□□□□ -0.48
TMEM116-217ENST00000552801 NBPF4Q96M43 638 aa12.03□□□□□ -0.48
TMEM116-217ENST00000552801 SGIP1Q9BQI5 828 aa12.03□□□□□ -0.48
TMEM116-217ENST00000552801 MAP3K5Q99683 1374 aa12.02□□□□□ -0.49
TMEM116-217ENST00000552801 PNPLA7Q6ZV29 1317 aa12.02□□□□□ -0.49
TMEM116-217ENST00000552801 MPRIPQ6WCQ1 1025 aa12.02□□□□□ -0.49
TMEM116-217ENST00000552801 LY75O60449 1722 aa12.01□□□□□ -0.49
TMEM116-217ENST00000552801 INSRP06213 1382 aa12.01□□□□□ -0.49
TMEM116-217ENST00000552801 KIF24Q5T7B8 1368 aa12.01□□□□□ -0.49
TMEM116-217ENST00000552801 HSP90AB2PQ58FF8 381 aa12.01□□□□□ -0.49
TMEM116-217ENST00000552801 FLAD1Q8NFF5 587 aa12.01□□□□□ -0.49
TMEM116-217ENST00000552801 SMARCC1Q92922 1105 aaPredicted RBP12.01□□□□□ -0.49
TMEM116-217ENST00000552801 AK7Q96M32 723 aa12□□□□□ -0.49
TMEM116-217ENST00000552801 SPG7Q9UQ90 795 aa12□□□□□ -0.49
TMEM116-217ENST00000552801 SHANK3Q9BYB0 1731 aa11.99□□□□□ -0.49
TMEM116-217ENST00000552801 TUBGCP6Q96RT7 1819 aa11.99□□□□□ -0.49
TMEM116-217ENST00000552801 GRIN3BO60391 1043 aa11.99□□□□□ -0.49
TMEM116-217ENST00000552801 NSD3Q9BZ95 1437 aa11.99□□□□□ -0.49
TMEM116-217ENST00000552801 PALLDQ8WX93 1383 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 99.6 ms