RNA–Protein interactions for RNA: ENST00000552431.5

ITGA5-210, Transcript of integrin subunit alpha 5, humanhuman

TSL 3

Gene ITGA5, Length 588 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA5-210ENST00000552431 FLAD1Q8NFF5 587 aa14.03□□□□□ -0.16
ITGA5-210ENST00000552431 DDX54Q8TDD1 881 aaKnown RBP14.03□□□□□ -0.16
ITGA5-210ENST00000552431 ZNF526Q8TF50 670 aaPredicted RBP14.03□□□□□ -0.16
ITGA5-210ENST00000552431 USP47Q96K76 1375 aa14.02□□□□□ -0.17
ITGA5-210ENST00000552431 NSD2O96028 1365 aa14.01□□□□□ -0.17
ITGA5-210ENST00000552431 PRIM1P49642 420 aaKnown RBP14.01□□□□□ -0.17
ITGA5-210ENST00000552431 COL23A1Q86Y22 540 aaPredicted RBP14.01□□□□□ -0.17
ITGA5-210ENST00000552431 KCNQ4P56696 695 aa14□□□□□ -0.17
ITGA5-210ENST00000552431 MSL1Q68DK7 614 aa14□□□□□ -0.17
ITGA5-210ENST00000552431 CICQ96RK0 1608 aaPredicted RBP14□□□□□ -0.17
ITGA5-210ENST00000552431 KIF3CO14782 793 aa13.99□□□□□ -0.17
ITGA5-210ENST00000552431 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.99□□□□□ -0.17
ITGA5-210ENST00000552431 NSD3Q9BZ95 1437 aa13.98□□□□□ -0.17
ITGA5-210ENST00000552431 WDR90Q96KV7 1748 aa13.98□□□□□ -0.17
ITGA5-210ENST00000552431 EDC4Q6P2E9 1401 aaKnown RBP13.98□□□□□ -0.17
ITGA5-210ENST00000552431 SBNO2Q9Y2G9 1366 aa13.97□□□□□ -0.17
ITGA5-210ENST00000552431 IGSF1Q8N6C5 1336 aa13.97□□□□□ -0.17
ITGA5-210ENST00000552431 NME9Q86XW9 330 aa13.97□□□□□ -0.17
ITGA5-210ENST00000552431 IP6K1Q92551 441 aa13.97□□□□□ -0.17
ITGA5-210ENST00000552431 UBR3Q6ZT12 1888 aa13.97□□□□□ -0.17
ITGA5-210ENST00000552431 RGPD2P0DJD1 1756 aa13.96□□□□□ -0.17
ITGA5-210ENST00000552431 TOMM70O94826 608 aa13.96□□□□□ -0.17
ITGA5-210ENST00000552431 HDGFL2Q7Z4V5 671 aaPredicted RBP13.96□□□□□ -0.17
ITGA5-210ENST00000552431 ZCRB1Q8TBF4 217 aaKnown RBP13.96□□□□□ -0.17
ITGA5-210ENST00000552431 C4BP0C0L5 1744 aa13.95□□□□□ -0.18
ITGA5-210ENST00000552431 CGNL1Q0VF96 1302 aa13.95□□□□□ -0.18
ITGA5-210ENST00000552431 ROCK2O75116 1388 aaKnown RBP13.95□□□□□ -0.18
ITGA5-210ENST00000552431 CD163L1Q9NR16 1453 aa13.94□□□□□ -0.18
ITGA5-210ENST00000552431 DNAJC5GQ8N7S2 189 aa13.94□□□□□ -0.18
ITGA5-210ENST00000552431 LTV1Q96GA3 475 aaPredicted RBP13.93□□□□□ -0.18
ITGA5-210ENST00000552431 MEGF6O75095 1541 aa13.93□□□□□ -0.18
ITGA5-210ENST00000552431 TOGARAM1Q9Y4F4 1720 aa13.93□□□□□ -0.18
ITGA5-210ENST00000552431 KIF13BQ9NQT8 1826 aa13.92□□□□□ -0.18
ITGA5-210ENST00000552431 AK7Q96M32 723 aa13.92□□□□□ -0.18
ITGA5-210ENST00000552431 TERF2IPQ9NYB0 399 aa13.92□□□□□ -0.18
ITGA5-210ENST00000552431 PALLDQ8WX93 1383 aa13.92□□□□□ -0.18
ITGA5-210ENST00000552431 ITGB4P16144 1822 aa13.92□□□□□ -0.18
ITGA5-210ENST00000552431 SMARCC1Q92922 1105 aaPredicted RBP13.9□□□□□ -0.18
ITGA5-210ENST00000552431 RTL1A6NKG5 1358 aa13.9□□□□□ -0.18
ITGA5-210ENST00000552431 SMG6Q86US8 1419 aaKnown RBP13.9□□□□□ -0.19
ITGA5-210ENST00000552431 SSFA2P28290 1259 aa13.89□□□□□ -0.19
ITGA5-210ENST00000552431 HOXC9P31274 260 aa13.89□□□□□ -0.19
ITGA5-210ENST00000552431 AMPHP49418 695 aa13.89□□□□□ -0.19
ITGA5-210ENST00000552431 RBM46Q8TBY0 533 aaKnown RBP13.89□□□□□ -0.19
ITGA5-210ENST00000552431 TMC1Q8TDI8 760 aa13.89□□□□□ -0.19
ITGA5-210ENST00000552431 RAPGEF4Q8WZA2 1011 aa13.89□□□□□ -0.19
ITGA5-210ENST00000552431 PCDH11XQ9BZA7 1347 aa13.89□□□□□ -0.19
ITGA5-210ENST00000552431 PCDH11YQ9BZA8 1340 aa13.89□□□□□ -0.19
ITGA5-210ENST00000552431 A0A1W2PP64 1363 aa13.88□□□□□ -0.19
ITGA5-210ENST00000552431 C16orf71Q8IYS4 520 aaPredicted RBP13.88□□□□□ -0.19
ITGA5-210ENST00000552431 JMYQ8N9B5 988 aa13.88□□□□□ -0.19
ITGA5-210ENST00000552431 L3MBTL2Q969R5 705 aa13.88□□□□□ -0.19
ITGA5-210ENST00000552431 KLRG1Q96E93 195 aa13.88□□□□□ -0.19
ITGA5-210ENST00000552431 KIAA1551Q9HCM1 1747 aa13.87□□□□□ -0.19
ITGA5-210ENST00000552431 PLEKHG2Q9H7P9 1386 aa13.87□□□□□ -0.19
ITGA5-210ENST00000552431 N4BP2Q86UW6 1770 aaPredicted RBP13.87□□□□□ -0.19
ITGA5-210ENST00000552431 COG3Q96JB2 828 aa13.87□□□□□ -0.19
ITGA5-210ENST00000552431 WWC3Q9ULE0 1092 aa13.87□□□□□ -0.19
ITGA5-210ENST00000552431 ARFGEF1Q9Y6D6 1849 aa13.87□□□□□ -0.19
ITGA5-210ENST00000552431 MAP3K19Q56UN5 1328 aa13.87□□□□□ -0.19
ITGA5-210ENST00000552431 PKD1L3Q7Z443 1732 aa13.87□□□□□ -0.19
ITGA5-210ENST00000552431 BRCA1P38398 1863 aaKnown RBP13.87□□□□□ -0.19
ITGA5-210ENST00000552431 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.86□□□□□ -0.19
ITGA5-210ENST00000552431 TATP17735 454 aaPredicted RBP13.86□□□□□ -0.19
ITGA5-210ENST00000552431 PRELPP51888 382 aa13.86□□□□□ -0.19
ITGA5-210ENST00000552431 FSTL1Q12841 308 aa13.86□□□□□ -0.19
ITGA5-210ENST00000552431 COL13A1Q5TAT6 717 aaPredicted RBP13.86□□□□□ -0.19
ITGA5-210ENST00000552431 TNS4Q8IZW8 715 aa13.86□□□□□ -0.19
ITGA5-210ENST00000552431 PXDNLA1KZ92 1463 aa13.86□□□□□ -0.19
ITGA5-210ENST00000552431 MAP2P11137 1827 aaKnown RBP13.85□□□□□ -0.19
ITGA5-210ENST00000552431 TNRC6CQ9HCJ0 1690 aaKnown RBP13.85□□□□□ -0.19
ITGA5-210ENST00000552431 PHF14O94880 888 aa13.85□□□□□ -0.19
ITGA5-210ENST00000552431 PUS7Q96PZ0 661 aaKnown RBP13.85□□□□□ -0.19
ITGA5-210ENST00000552431 CAPN15O75808 1086 aa13.84□□□□□ -0.19
ITGA5-210ENST00000552431 TGFB2P61812 414 aa13.84□□□□□ -0.19
ITGA5-210ENST00000552431 MPRIPQ6WCQ1 1025 aa13.84□□□□□ -0.19
ITGA5-210ENST00000552431 SLC12A5Q9H2X9 1139 aa13.84□□□□□ -0.19
ITGA5-210ENST00000552431 PCNTO95613 3336 aa13.84□□□□□ -0.19
ITGA5-210ENST00000552431 C10orf71Q711Q0 1435 aa13.83□□□□□ -0.2
ITGA5-210ENST00000552431 NMRK2Q9NPI5 230 aa13.83□□□□□ -0.2
ITGA5-210ENST00000552431 NBPF6Q5VWK0 638 aa13.82□□□□□ -0.2
ITGA5-210ENST00000552431 NBPF4Q96M43 638 aa13.82□□□□□ -0.2
ITGA5-210ENST00000552431 BCS1LQ9Y276 419 aa13.82□□□□□ -0.2
ITGA5-210ENST00000552431 KDM2BQ8NHM5 1336 aa13.82□□□□□ -0.2
ITGA5-210ENST00000552431 ARHGAP27Q6ZUM4 889 aa13.81□□□□□ -0.2
ITGA5-210ENST00000552431 MMP10P09238 476 aa13.8□□□□□ -0.2
ITGA5-210ENST00000552431 AMIGO3Q86WK7 504 aa13.8□□□□□ -0.2
ITGA5-210ENST00000552431 USHBP1Q8N6Y0 703 aa13.8□□□□□ -0.2
ITGA5-210ENST00000552431 C4AP0C0L4 1744 aa13.79□□□□□ -0.2
ITGA5-210ENST00000552431 LOC102724428A0A0B4J2F2 783 aa13.79□□□□□ -0.2
ITGA5-210ENST00000552431 GNPATO15228 680 aa13.79□□□□□ -0.2
ITGA5-210ENST00000552431 SIK1P57059 783 aa13.79□□□□□ -0.2
ITGA5-210ENST00000552431 CCDC87Q9NVE4 849 aa13.79□□□□□ -0.2
ITGA5-210ENST00000552431 KIF24Q5T7B8 1368 aa13.79□□□□□ -0.2
ITGA5-210ENST00000552431 CYP27B1O15528 508 aa13.78□□□□□ -0.2
ITGA5-210ENST00000552431 FCHSD2O94868 740 aa13.78□□□□□ -0.2
ITGA5-210ENST00000552431 NLGN1Q8N2Q7 840 aa13.78□□□□□ -0.2
ITGA5-210ENST00000552431 LINC00116Q8NCU8 138 aa13.78□□□□□ -0.2
ITGA5-210ENST00000552431 CARD11Q9BXL7 1154 aa13.78□□□□□ -0.2
ITGA5-210ENST00000552431 INSRP06213 1382 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 162.5 ms