RNA–Protein interactions for RNA: ENST00000552351.5

CHPT1-210, Transcript of choline phosphotransferase 1, humanhuman

TSL 2

Gene CHPT1, Length 1,524 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPT1-210ENST00000552351 MARCH10Q8NA82 808 aaPredicted RBP36.3■■■■□ 3.4
CHPT1-210ENST00000552351 SHANK3Q9BYB0 1731 aa36.3■■■■□ 3.4
CHPT1-210ENST00000552351 ZCRB1Q8TBF4 217 aaKnown RBP36.29■■■■□ 3.4
CHPT1-210ENST00000552351 PKD1L3Q7Z443 1732 aa36.29■■■■□ 3.4
CHPT1-210ENST00000552351 KDRP35968 1356 aa36.29■■■■□ 3.4
CHPT1-210ENST00000552351 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP36.26■■■■□ 3.44e-10■□□□□ 9.9
CHPT1-210ENST00000552351 SBF2Q86WG5 1849 aa36.24■■■■□ 3.39
CHPT1-210ENST00000552351 PRKRIP1Q9H875 184 aaPredicted RBP36.23■■■■□ 3.39
CHPT1-210ENST00000552351 MYBBP1AQ9BQG0 1328 aaKnown RBP36.22■■■■□ 3.39
CHPT1-210ENST00000552351 PCDH11XQ9BZA7 1347 aa36.21■■■■□ 3.39
CHPT1-210ENST00000552351 PCDH11YQ9BZA8 1340 aa36.21■■■■□ 3.39
CHPT1-210ENST00000552351 SULT6B1Q6IMI4 303 aa36.21■■■■□ 3.39
CHPT1-210ENST00000552351 SPG7Q9UQ90 795 aa36.2■■■■□ 3.39
CHPT1-210ENST00000552351 DDX54Q8TDD1 881 aaKnown RBP36.19■■■■□ 3.38
CHPT1-210ENST00000552351 NUDCQ9Y266 331 aa36.19■■■■□ 3.38
CHPT1-210ENST00000552351 AEBP1Q8IUX7 1158 aa36.18■■■■□ 3.38
CHPT1-210ENST00000552351 TNS1Q9HBL0 1735 aaKnown RBP36.18■■■■□ 3.38
CHPT1-210ENST00000552351 SF3B2Q13435 895 aaKnown RBP36.18■■■■□ 3.38
CHPT1-210ENST00000552351 U2SURPO15042 1029 aaKnown RBP36.13■■■■□ 3.38
CHPT1-210ENST00000552351 TRIM37O94972 964 aa36.13■■■■□ 3.38
CHPT1-210ENST00000552351 AMOTQ4VCS5 1084 aa36.13■■■■□ 3.38
CHPT1-210ENST00000552351 NHSQ6T4R5 1651 aa36.13■■■■□ 3.37
CHPT1-210ENST00000552351 PLEKHO1Q53GL0 409 aaPredicted RBP36.12■■■■□ 3.37
CHPT1-210ENST00000552351 CYP27B1O15528 508 aa36.1■■■■□ 3.37
CHPT1-210ENST00000552351 HMOX1P09601 288 aa36.1■■■■□ 3.37
CHPT1-210ENST00000552351 BCL11BQ9C0K0 894 aaPredicted RBP36.1■■■■□ 3.37
CHPT1-210ENST00000552351 IFNL2Q8IZJ0 200 aa36.07■■■■□ 3.36
CHPT1-210ENST00000552351 DOT1LQ8TEK3 1739 aa36.06■■■■□ 3.36
CHPT1-210ENST00000552351 BAG6P46379 1132 aa36.06■■■■□ 3.36
CHPT1-210ENST00000552351 NKX1-1Q15270 411 aaPredicted RBP36.06■■■■□ 3.36
CHPT1-210ENST00000552351 KAT6BQ8WYB5 2073 aa36.05■■■■□ 3.36
CHPT1-210ENST00000552351 U2AF1L5P0DN76 240 aaPredicted RBP36.03■■■■□ 3.36
CHPT1-210ENST00000552351 PHKG2P15735 406 aa36.03■■■■□ 3.36
CHPT1-210ENST00000552351 U2AF1Q01081 240 aaKnown RBP eCLIP36.03■■■■□ 3.36
CHPT1-210ENST00000552351 RGPD3A6NKT7 1758 aaPredicted RBP36.03■■■■□ 3.36
CHPT1-210ENST00000552351 RGPD4Q7Z3J3 1758 aa36.03■■■■□ 3.36
CHPT1-210ENST00000552351 ANP32CO43423 234 aa36.03■■■■□ 3.36
CHPT1-210ENST00000552351 FCHSD2O94868 740 aa36.01■■■■□ 3.36
CHPT1-210ENST00000552351 APBA3O96018 575 aa36.01■■■■□ 3.36
CHPT1-210ENST00000552351 HSP90AB1P08238 724 aaKnown RBP36■■■■□ 3.35
CHPT1-210ENST00000552351 ACSBG1Q96GR2 724 aa36■■■■□ 3.35
CHPT1-210ENST00000552351 RSPH6AQ9H0K4 717 aa36■■■■□ 3.35
CHPT1-210ENST00000552351 ZNF530Q6P9A1 599 aaPredicted RBP35.99■■■■□ 3.35
CHPT1-210ENST00000552351 BTAF1O14981 1849 aa35.98■■■■□ 3.35
CHPT1-210ENST00000552351 KCNQ2O43526 872 aa35.98■■■■□ 3.35
CHPT1-210ENST00000552351 TOGARAM1Q9Y4F4 1720 aa35.97■■■■□ 3.35
CHPT1-210ENST00000552351 C1orf141Q5JVX7 400 aa35.97■■■■□ 3.35
CHPT1-210ENST00000552351 DEFB132Q7Z7B7 95 aa35.97■■■■□ 3.35
CHPT1-210ENST00000552351 PLSCR1O15162 318 aa35.95■■■■□ 3.35
CHPT1-210ENST00000552351 PRKAR2BP31323 418 aa35.95■■■■□ 3.35
CHPT1-210ENST00000552351 PTF1AQ7RTS3 328 aa35.95■■■■□ 3.35
CHPT1-210ENST00000552351 PRIM1P49642 420 aaKnown RBP35.94■■■■□ 3.34
CHPT1-210ENST00000552351 DCAF5Q96JK2 942 aa35.93■■■■□ 3.34
CHPT1-210ENST00000552351 ITGB4P16144 1822 aa35.93■■■■□ 3.34
CHPT1-210ENST00000552351 EN1Q05925 392 aaPredicted RBP35.92■■■■□ 3.34
CHPT1-210ENST00000552351 AKAP4Q5JQC9 854 aa35.92■■■■□ 3.34
CHPT1-210ENST00000552351 SYTL4Q96C24 671 aaPredicted RBP35.92■■■■□ 3.34
CHPT1-210ENST00000552351 PNNQ9H307 717 aaKnown RBP35.92■■■■□ 3.34
CHPT1-210ENST00000552351 MTHFSDQ2M296 383 aaKnown RBP35.91■■■■□ 3.34
CHPT1-210ENST00000552351 GAS2L2Q8NHY3 880 aa35.91■■■■□ 3.34
CHPT1-210ENST00000552351 CAMKK2Q96RR4 588 aa35.91■■■■□ 3.34
CHPT1-210ENST00000552351 SCN11AQ9UI33 1791 aa35.88■■■■□ 3.33
CHPT1-210ENST00000552351 RREB1Q92766 1687 aa35.88■■■■□ 3.33
CHPT1-210ENST00000552351 KDM6AO15550 1401 aaPredicted RBP35.87■■■■□ 3.33
CHPT1-210ENST00000552351 ERVV-2B6SEH9 535 aa35.87■■■■□ 3.33
CHPT1-210ENST00000552351 NEFMP07197 916 aa35.86■■■■□ 3.33
CHPT1-210ENST00000552351 PHACTR3Q96KR7 559 aa35.86■■■■□ 3.33
CHPT1-210ENST00000552351 ADAMTS7Q9UKP4 1686 aa35.85■■■■□ 3.33
CHPT1-210ENST00000552351 WDR43Q15061 677 aaKnown RBP eCLIP35.84■■■■□ 3.33
CHPT1-210ENST00000552351 EZH2Q15910 746 aaKnown RBP35.84■■■■□ 3.33
CHPT1-210ENST00000552351 VIRMAQ69YN4 1812 aaKnown RBP35.84■■■■□ 3.33
CHPT1-210ENST00000552351 MPRIPQ6WCQ1 1025 aa35.83■■■■□ 3.33
CHPT1-210ENST00000552351 PLEKHF1Q96S99 279 aa35.82■■■■□ 3.32
CHPT1-210ENST00000552351 TMOD3Q9NYL9 352 aa35.82■■■■□ 3.32
CHPT1-210ENST00000552351 MAP3K5Q99683 1374 aa35.81■■■■□ 3.32
CHPT1-210ENST00000552351 LY75O60449 1722 aa35.79■■■■□ 3.32
CHPT1-210ENST00000552351 GNAT3A8MTJ3 354 aa35.79■■■■□ 3.32
CHPT1-210ENST00000552351 NUP188Q5SRE5 1749 aa35.78■■■■□ 3.32
CHPT1-210ENST00000552351 PIGBQ92521 554 aa35.78■■■■□ 3.32
CHPT1-210ENST00000552351 MAPK8IP3Q9UPT6 1336 aa35.76■■■■□ 3.32
CHPT1-210ENST00000552351 MRC1P22897 1456 aa35.76■■■■□ 3.32
CHPT1-210ENST00000552351 CABP4P57796 275 aa35.75■■■■□ 3.31
CHPT1-210ENST00000552351 TXNRD1Q16881 649 aa35.75■■■■□ 3.31
CHPT1-210ENST00000552351 SMARCC1Q92922 1105 aaPredicted RBP35.75■■■■□ 3.31
CHPT1-210ENST00000552351 RNMTO43148 476 aaKnown RBP35.74■■■■□ 3.31
CHPT1-210ENST00000552351 PROM2Q8N271 834 aa35.73■■■■□ 3.31
CHPT1-210ENST00000552351 ADAMTS8Q9UP79 889 aa35.73■■■■□ 3.31
CHPT1-210ENST00000552351 SLC27A3Q5K4L6 730 aa35.72■■■■□ 3.31
CHPT1-210ENST00000552351 MRS2Q9HD23 443 aa35.72■■■■□ 3.31
CHPT1-210ENST00000552351 HTATSF1O43719 755 aaKnown RBP35.71■■■■□ 3.31
CHPT1-210ENST00000552351 CCDC184Q52MB2 194 aa35.71■■■■□ 3.31
CHPT1-210ENST00000552351 LGR6Q9HBX8 967 aa35.71■■■■□ 3.31
CHPT1-210ENST00000552351 DLG5Q8TDM6 1919 aa35.7■■■■□ 3.31
CHPT1-210ENST00000552351 PALLDQ8WX93 1383 aa35.7■■■■□ 3.31
CHPT1-210ENST00000552351 SLC52A2Q9HAB3 445 aa35.7■■■■□ 3.31
CHPT1-210ENST00000552351 NFATC2IPQ8NCF5 419 aa35.69■■■■□ 3.3
CHPT1-210ENST00000552351 CEMIPQ8WUJ3 1361 aa35.69■■■■□ 3.3
CHPT1-210ENST00000552351 HMGB2P26583 209 aaKnown RBP35.67■■■■□ 3.3
CHPT1-210ENST00000552351 NFE2L2Q16236 605 aa35.67■■■■□ 3.3
CHPT1-210ENST00000552351 RUNDC1Q96C34 613 aa35.67■■■■□ 3.3
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms