RNA–Protein interactions for RNA: ENST00000552295.5

BEST3-211, Transcript of bestrophin 3, humanhuman

TSL 5

Gene BEST3, Length 720 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-211ENST00000552295 ATP13A2Q9NQ11 1180 aa12.01□□□□□ -0.49
BEST3-211ENST00000552295 RAB3GAP2Q9H2M9 1393 aa12.01□□□□□ -0.49
BEST3-211ENST00000552295 RAPGEF3O95398 923 aa12□□□□□ -0.49
BEST3-211ENST00000552295 KIF15Q9NS87 1388 aa12□□□□□ -0.49
BEST3-211ENST00000552295 ABCA6Q8N139 1617 aa12□□□□□ -0.49
BEST3-211ENST00000552295 DUOX2Q9NRD8 1548 aa11.99□□□□□ -0.49
BEST3-211ENST00000552295 DIP2CQ9Y2E4 1556 aa11.98□□□□□ -0.49
BEST3-211ENST00000552295 WFS1O76024 890 aa11.98□□□□□ -0.49
BEST3-211ENST00000552295 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.98□□□□□ -0.49
BEST3-211ENST00000552295 HPS1Q92902 700 aa11.98□□□□□ -0.49
BEST3-211ENST00000552295 NUDT12Q9BQG2 462 aa11.98□□□□□ -0.49
BEST3-211ENST00000552295 FDX1P10109 184 aa11.97□□□□□ -0.49
BEST3-211ENST00000552295 SENP2Q9HC62 589 aa11.97□□□□□ -0.49
BEST3-211ENST00000552295 MAGI2Q86UL8 1455 aa11.96□□□□□ -0.49
BEST3-211ENST00000552295 ANKRD50Q9ULJ7 1429 aa11.96□□□□□ -0.49
BEST3-211ENST00000552295 HRCP23327 699 aa11.96□□□□□ -0.49
BEST3-211ENST00000552295 C6orf229H3BNL8 230 aa11.95□□□□□ -0.5
BEST3-211ENST00000552295 EIF2AK4Q9P2K8 1649 aaKnown RBP11.95□□□□□ -0.5
BEST3-211ENST00000552295 ERBINQ96RT1 1412 aa11.94□□□□□ -0.5
BEST3-211ENST00000552295 YEATS2Q9ULM3 1422 aa11.94□□□□□ -0.5
BEST3-211ENST00000552295 ALDH1A1P00352 501 aa11.94□□□□□ -0.5
BEST3-211ENST00000552295 SSTR3P32745 418 aaPredicted RBP11.94□□□□□ -0.5
BEST3-211ENST00000552295 PCDHGC3Q9UN70 934 aa11.94□□□□□ -0.5
BEST3-211ENST00000552295 ARHGEF40Q8TER5 1519 aa11.94□□□□□ -0.5
BEST3-211ENST00000552295 BCORL1Q5H9F3 1711 aa11.94□□□□□ -0.5
BEST3-211ENST00000552295 UNC13BO14795 1591 aa11.93□□□□□ -0.5
BEST3-211ENST00000552295 PTCRAQ6ISU1 281 aaPredicted RBP11.93□□□□□ -0.5
BEST3-211ENST00000552295 TRIM47Q96LD4 638 aa11.93□□□□□ -0.5
BEST3-211ENST00000552295 A2MP01023 1474 aa11.93□□□□□ -0.5
BEST3-211ENST00000552295 MS4A1P11836 297 aa11.92□□□□□ -0.5
BEST3-211ENST00000552295 SNRPBP14678 240 aaKnown RBP11.92□□□□□ -0.5
BEST3-211ENST00000552295 NFX1Q12986 1120 aaKnown RBP11.92□□□□□ -0.5
BEST3-211ENST00000552295 EHBP1Q8NDI1 1231 aa11.92□□□□□ -0.5
BEST3-211ENST00000552295 DEPDC5O75140 1603 aa11.92□□□□□ -0.5
BEST3-211ENST00000552295 REREQ9P2R6 1566 aa11.92□□□□□ -0.5
BEST3-211ENST00000552295 DHX29Q7Z478 1369 aaKnown RBP11.92□□□□□ -0.5
BEST3-211ENST00000552295 CCNYL3P0C7X3 344 aa11.91□□□□□ -0.5
BEST3-211ENST00000552295 TTLL12Q14166 644 aaPredicted RBP11.91□□□□□ -0.5
BEST3-211ENST00000552295 SPIRE2Q8WWL2 714 aa11.91□□□□□ -0.5
BEST3-211ENST00000552295 KIFC2Q96AC6 838 aa11.91□□□□□ -0.5
BEST3-211ENST00000552295 KDM5DQ9BY66 1539 aa11.91□□□□□ -0.5
BEST3-211ENST00000552295 RNF17Q9BXT8 1623 aaKnown RBP11.9□□□□□ -0.5
BEST3-211ENST00000552295 SIGLEC1Q9BZZ2 1709 aa11.9□□□□□ -0.5
BEST3-211ENST00000552295 DHX57Q6P158 1386 aaKnown RBP11.9□□□□□ -0.5
BEST3-211ENST00000552295 MROH1Q8NDA8 1641 aa11.89□□□□□ -0.51
BEST3-211ENST00000552295 ATP10AO60312 1499 aa11.89□□□□□ -0.51
BEST3-211ENST00000552295 ACIN1Q9UKV3 1341 aaKnown RBP11.88□□□□□ -0.51
BEST3-211ENST00000552295 SIAH2O43255 324 aa11.88□□□□□ -0.51
BEST3-211ENST00000552295 NDUFV2P19404 249 aa11.88□□□□□ -0.51
BEST3-211ENST00000552295 PTPRNQ16849 979 aa11.88□□□□□ -0.51
BEST3-211ENST00000552295 BARGINQ6ZT62 677 aa11.88□□□□□ -0.51
BEST3-211ENST00000552295 IQGAP3Q86VI3 1631 aa11.88□□□□□ -0.51
BEST3-211ENST00000552295 PZPP20742 1482 aa11.88□□□□□ -0.51
BEST3-211ENST00000552295 PRDM15P57071 1507 aaPredicted RBP11.87□□□□□ -0.51
BEST3-211ENST00000552295 WASF2Q9Y6W5 498 aa11.87□□□□□ -0.51
BEST3-211ENST00000552295 AGLP35573 1532 aa11.86□□□□□ -0.51
BEST3-211ENST00000552295 MOXD2PA6NHM9 499 aa11.86□□□□□ -0.51
BEST3-211ENST00000552295 SH3BP2P78314 561 aa11.86□□□□□ -0.51
BEST3-211ENST00000552295 AMHR2Q16671 573 aa11.86□□□□□ -0.51
BEST3-211ENST00000552295 TRIM52Q96A61 297 aa11.86□□□□□ -0.51
BEST3-211ENST00000552295 VWDEQ8N2E2 1590 aa11.86□□□□□ -0.51
BEST3-211ENST00000552295 FAM135AQ9P2D6 1515 aa11.86□□□□□ -0.51
BEST3-211ENST00000552295 TERTO14746 1132 aaKnown RBP11.85□□□□□ -0.51
BEST3-211ENST00000552295 PRR7Q8TB68 274 aa11.85□□□□□ -0.51
BEST3-211ENST00000552295 EVA1BQ9NVM1 165 aa11.85□□□□□ -0.51
BEST3-211ENST00000552295 NUP155O75694 1391 aa11.84□□□□□ -0.51
BEST3-211ENST00000552295 KIF3BO15066 747 aa11.84□□□□□ -0.51
BEST3-211ENST00000552295 ZMYND10O75800 440 aa11.84□□□□□ -0.51
BEST3-211ENST00000552295 GIGYF2Q6Y7W6 1299 aaKnown RBP11.84□□□□□ -0.51
BEST3-211ENST00000552295 UNC93B1Q9H1C4 597 aa11.84□□□□□ -0.51
BEST3-211ENST00000552295 CEP152O94986 1710 aa11.83□□□□□ -0.52
BEST3-211ENST00000552295 SPDYE5A6NIY4 337 aa11.83□□□□□ -0.52
BEST3-211ENST00000552295 WIPF1O43516 503 aa11.83□□□□□ -0.52
BEST3-211ENST00000552295 MTMR2Q13614 643 aa11.83□□□□□ -0.52
BEST3-211ENST00000552295 CCER1Q8TC90 406 aaPredicted RBP11.83□□□□□ -0.52
BEST3-211ENST00000552295 TET3O43151 1660 aa11.82□□□□□ -0.52
BEST3-211ENST00000552295 KCNH2Q12809 1159 aa11.82□□□□□ -0.52
BEST3-211ENST00000552295 LINC01559Q495D7 138 aa11.82□□□□□ -0.52
BEST3-211ENST00000552295 MPHOSPH9Q99550 1183 aa11.82□□□□□ -0.52
BEST3-211ENST00000552295 ZC3H13Q5T200 1668 aaKnown RBP11.81□□□□□ -0.52
BEST3-211ENST00000552295 CAPN5O15484 640 aaPredicted RBP11.81□□□□□ -0.52
BEST3-211ENST00000552295 INSM1Q01101 510 aaPredicted RBP11.81□□□□□ -0.52
BEST3-211ENST00000552295 DESI1Q6ICB0 168 aa11.81□□□□□ -0.52
BEST3-211ENST00000552295 BEGAINQ9BUH8 593 aa11.81□□□□□ -0.52
BEST3-211ENST00000552295 LMTK2Q8IWU2 1503 aa11.81□□□□□ -0.52
BEST3-211ENST00000552295 BAP1Q92560 729 aa11.8□□□□□ -0.52
BEST3-211ENST00000552295 E9PCH4 1651 aa11.8□□□□□ -0.52
BEST3-211ENST00000552295 KANK1Q14678 1352 aa11.79□□□□□ -0.52
BEST3-211ENST00000552295 ZC3H15Q8WU90 426 aaKnown RBP11.79□□□□□ -0.52
BEST3-211ENST00000552295 STK17AQ9UEE5 414 aa11.79□□□□□ -0.52
BEST3-211ENST00000552295 ABCC3O15438 1527 aa11.79□□□□□ -0.52
BEST3-211ENST00000552295 CLSPNQ9HAW4 1339 aa11.79□□□□□ -0.52
BEST3-211ENST00000552295 CAMSAP1Q5T5Y3 1602 aa11.78□□□□□ -0.52
BEST3-211ENST00000552295 EFCAB6Q5THR3 1501 aa11.78□□□□□ -0.52
BEST3-211ENST00000552295 BMP1P13497 986 aa11.78□□□□□ -0.52
BEST3-211ENST00000552295 DIXDC1Q155Q3 683 aa11.78□□□□□ -0.52
BEST3-211ENST00000552295 ZNF511Q8NB15 262 aa11.78□□□□□ -0.52
BEST3-211ENST00000552295 VARSP26640 1264 aaKnown RBP11.77□□□□□ -0.53
BEST3-211ENST00000552295 GJA5P36382 358 aa11.77□□□□□ -0.53
BEST3-211ENST00000552295 GGT6Q6P531 493 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms