RNA–Protein interactions for RNA: ENST00000552089.5

RBFOX1-214, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 5 BASIC

Gene RBFOX1, Length 1,430 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-214ENST00000552089 CCNL1Q9UK58 526 aaPredicted RBP16.79■□□□□ 0.28
RBFOX1-214ENST00000552089 RGPD5Q99666 1765 aa16.77■□□□□ 0.27
RBFOX1-214ENST00000552089 SMC1BQ8NDV3 1235 aa16.77■□□□□ 0.27
RBFOX1-214ENST00000552089 SIN3AQ96ST3 1273 aa16.77■□□□□ 0.27
RBFOX1-214ENST00000552089 SOX12O15370 315 aa16.76■□□□□ 0.27
RBFOX1-214ENST00000552089 IL2RBP14784 551 aa16.76■□□□□ 0.27
RBFOX1-214ENST00000552089 SYTL4Q96C24 671 aaPredicted RBP16.76■□□□□ 0.27
RBFOX1-214ENST00000552089 C10orf71Q711Q0 1435 aa16.76■□□□□ 0.27
RBFOX1-214ENST00000552089 LY75O60449 1722 aa16.75■□□□□ 0.27
RBFOX1-214ENST00000552089 PLEKHG2Q9H7P9 1386 aa16.75■□□□□ 0.27
RBFOX1-214ENST00000552089 KCPQ6ZWJ8 1503 aa16.75■□□□□ 0.27
RBFOX1-214ENST00000552089 NEUROD1Q13562 356 aa16.74■□□□□ 0.27
RBFOX1-214ENST00000552089 KDM2AQ9Y2K7 1162 aa16.74■□□□□ 0.27
RBFOX1-214ENST00000552089 KAT6BQ8WYB5 2073 aa16.74■□□□□ 0.27
RBFOX1-214ENST00000552089 ARHGAP27Q6ZUM4 889 aa16.73■□□□□ 0.27
RBFOX1-214ENST00000552089 DCAF11Q8TEB1 546 aa16.73■□□□□ 0.27
RBFOX1-214ENST00000552089 KDM2BQ8NHM5 1336 aa16.73■□□□□ 0.27
RBFOX1-214ENST00000552089 MLLT1Q03111 559 aaPredicted RBP16.72■□□□□ 0.27
RBFOX1-214ENST00000552089 NLRP2Q9NX02 1062 aa16.72■□□□□ 0.27
RBFOX1-214ENST00000552089 NSD2O96028 1365 aa16.72■□□□□ 0.27
RBFOX1-214ENST00000552089 FOXN1O15353 648 aa16.71■□□□□ 0.27
RBFOX1-214ENST00000552089 PRIM1P49642 420 aaKnown RBP16.71■□□□□ 0.27
RBFOX1-214ENST00000552089 C9orf131Q5VYM1 1079 aa16.71■□□□□ 0.27
RBFOX1-214ENST00000552089 FLAD1Q8NFF5 587 aa16.71■□□□□ 0.27
RBFOX1-214ENST00000552089 RRAGCQ9HB90 399 aa16.71■□□□□ 0.27
RBFOX1-214ENST00000552089 PRDM10Q9NQV6 1147 aa16.71■□□□□ 0.27
RBFOX1-214ENST00000552089 BCS1LQ9Y276 419 aa16.71■□□□□ 0.27
RBFOX1-214ENST00000552089 KCNH5Q8NCM2 988 aa16.7■□□□□ 0.26
RBFOX1-214ENST00000552089 DDX54Q8TDD1 881 aaKnown RBP16.7■□□□□ 0.26
RBFOX1-214ENST00000552089 ANKRD36BQ8N2N9 1353 aa16.7■□□□□ 0.26
RBFOX1-214ENST00000552089 PXDNLA1KZ92 1463 aa16.7■□□□□ 0.26
RBFOX1-214ENST00000552089 ABHD8Q96I13 439 aa16.69■□□□□ 0.26
RBFOX1-214ENST00000552089 ERBB3P21860 1342 aa16.68■□□□□ 0.26
RBFOX1-214ENST00000552089 NFAT5O94916 1531 aa16.67■□□□□ 0.26
RBFOX1-214ENST00000552089 USP54Q70EL1 1684 aa16.67■□□□□ 0.26
RBFOX1-214ENST00000552089 TNRC6CQ9HCJ0 1690 aaKnown RBP16.67■□□□□ 0.26
RBFOX1-214ENST00000552089 DOT1LQ8TEK3 1739 aa16.67■□□□□ 0.26
RBFOX1-214ENST00000552089 KIAA1210Q9ULL0 1709 aa16.67■□□□□ 0.26
RBFOX1-214ENST00000552089 SRPK2P78362 688 aaKnown RBP16.67■□□□□ 0.26
RBFOX1-214ENST00000552089 C5P01031 1676 aa16.66■□□□□ 0.26
RBFOX1-214ENST00000552089 QRICH2Q9H0J4 1663 aa16.66■□□□□ 0.26
RBFOX1-214ENST00000552089 PKD1L3Q7Z443 1732 aa16.66■□□□□ 0.26
RBFOX1-214ENST00000552089 USP47Q96K76 1375 aa16.65■□□□□ 0.26
RBFOX1-214ENST00000552089 L3MBTL2Q969R5 705 aa16.65■□□□□ 0.26
RBFOX1-214ENST00000552089 CTCFP49711 727 aaPredicted RBP16.63■□□□□ 0.25
RBFOX1-214ENST00000552089 FCHSD2O94868 740 aa16.62■□□□□ 0.25
RBFOX1-214ENST00000552089 PHF14O94880 888 aa16.62■□□□□ 0.25
RBFOX1-214ENST00000552089 CENPBP07199 599 aaPredicted RBP16.62■□□□□ 0.25
RBFOX1-214ENST00000552089 SMIM5Q71RC9 77 aa16.62■□□□□ 0.25
RBFOX1-214ENST00000552089 AIDAQ96BJ3 306 aa16.62■□□□□ 0.25
RBFOX1-214ENST00000552089 CABP2Q9NPB3 220 aa16.62■□□□□ 0.25
RBFOX1-214ENST00000552089 MKRN1Q9UHC7 482 aaKnown RBP16.62■□□□□ 0.25
RBFOX1-214ENST00000552089 KIAA1551Q9HCM1 1747 aa16.62■□□□□ 0.25
RBFOX1-214ENST00000552089 A0A0G2JLW4 131 aa16.62■□□□□ 0.25
RBFOX1-214ENST00000552089 AMIGO3Q86WK7 504 aa16.62■□□□□ 0.25
RBFOX1-214ENST00000552089 CABP1Q9NZU7 370 aa16.62■□□□□ 0.25
RBFOX1-214ENST00000552089 RNF181Q9P0P0 153 aa16.62■□□□□ 0.25
RBFOX1-214ENST00000552089 AK7Q96M32 723 aa16.61■□□□□ 0.25
RBFOX1-214ENST00000552089 TOGARAM1Q9Y4F4 1720 aa16.6■□□□□ 0.25
RBFOX1-214ENST00000552089 RGS19P49795 217 aa16.6■□□□□ 0.25
RBFOX1-214ENST00000552089 ANKRD24Q8TF21 1146 aa16.6■□□□□ 0.25
RBFOX1-214ENST00000552089 STAC3Q96MF2 364 aa16.6■□□□□ 0.25
RBFOX1-214ENST00000552089 TGFB2P61812 414 aa16.59■□□□□ 0.25
RBFOX1-214ENST00000552089 N4BP2Q86UW6 1770 aaPredicted RBP16.59■□□□□ 0.25
RBFOX1-214ENST00000552089 TTC21BQ7Z4L5 1316 aa16.58■□□□□ 0.25
RBFOX1-214ENST00000552089 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.58■□□□□ 0.24
RBFOX1-214ENST00000552089 CCDC85CA6NKD9 419 aa16.58■□□□□ 0.24
RBFOX1-214ENST00000552089 NSD3Q9BZ95 1437 aa16.57■□□□□ 0.24
RBFOX1-214ENST00000552089 LBX1P52954 281 aa16.57■□□□□ 0.24
RBFOX1-214ENST00000552089 C4BP0C0L5 1744 aa16.57■□□□□ 0.24
RBFOX1-214ENST00000552089 MMP10P09238 476 aa16.56■□□□□ 0.24
RBFOX1-214ENST00000552089 DPEP1P16444 411 aa16.56■□□□□ 0.24
RBFOX1-214ENST00000552089 HMGB2P26583 209 aaKnown RBP16.56■□□□□ 0.24
RBFOX1-214ENST00000552089 KIF13BQ9NQT8 1826 aa16.56■□□□□ 0.24
RBFOX1-214ENST00000552089 NBPF1Q3BBV0 1214 aa16.55■□□□□ 0.24
RBFOX1-214ENST00000552089 CREBZFQ9NS37 354 aa16.55■□□□□ 0.24
RBFOX1-214ENST00000552089 VEGFAP15692 232 aaPredicted RBP16.54■□□□□ 0.24
RBFOX1-214ENST00000552089 EIF4G2P78344 907 aaKnown RBP eCLIP16.54■□□□□ 0.24
RBFOX1-214ENST00000552089 PALLDQ8WX93 1383 aa16.54■□□□□ 0.24
RBFOX1-214ENST00000552089 TAF1LQ8IZX4 1826 aa16.53■□□□□ 0.24
RBFOX1-214ENST00000552089 TTC21AQ8NDW8 1320 aa16.53■□□□□ 0.24
RBFOX1-214ENST00000552089 CNTNAP1P78357 1384 aa16.53■□□□□ 0.24
RBFOX1-214ENST00000552089 SSFA2P28290 1259 aa16.53■□□□□ 0.24
RBFOX1-214ENST00000552089 UBR3Q6ZT12 1888 aa16.52■□□□□ 0.23
RBFOX1-214ENST00000552089 HSPA8P11142 646 aaKnown RBP16.5■□□□□ 0.23
RBFOX1-214ENST00000552089 MIER1Q8N108 512 aa16.5■□□□□ 0.23
RBFOX1-214ENST00000552089 ZCRB1Q8TBF4 217 aaKnown RBP16.5■□□□□ 0.23
RBFOX1-214ENST00000552089 DCAF5Q96JK2 942 aa16.5■□□□□ 0.23
RBFOX1-214ENST00000552089 BRCA1P38398 1863 aaKnown RBP16.49■□□□□ 0.23
RBFOX1-214ENST00000552089 ZC3H4Q9UPT8 1303 aaKnown RBP16.49■□□□□ 0.23
RBFOX1-214ENST00000552089 TNRC18O15417 2968 aaPredicted RBP16.48■□□□□ 0.23
RBFOX1-214ENST00000552089 ARFGEF1Q9Y6D6 1849 aa16.48■□□□□ 0.23
RBFOX1-214ENST00000552089 WBP1LQ9NX94 342 aa16.48■□□□□ 0.23
RBFOX1-214ENST00000552089 LTN1O94822 1766 aa16.47■□□□□ 0.23
RBFOX1-214ENST00000552089 CCDC87Q9NVE4 849 aa16.47■□□□□ 0.23
RBFOX1-214ENST00000552089 CENPJQ9HC77 1338 aaPredicted RBP16.47■□□□□ 0.23
RBFOX1-214ENST00000552089 GLTPD2A6NH11 291 aa16.46■□□□□ 0.23
RBFOX1-214ENST00000552089 KCNA3P22001 575 aa16.46■□□□□ 0.23
RBFOX1-214ENST00000552089 DALRD3Q5D0E6 543 aaKnown RBP16.46■□□□□ 0.23
RBFOX1-214ENST00000552089 CFAP44Q96MT7 982 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms