RNA–Protein interactions for RNA: ENST00000552022.5

CACNB3-221, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 4

Gene CACNB3, Length 564 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-221ENST00000552022 ANKRD36BQ8N2N9 1353 aa18.35■□□□□ 0.53
CACNB3-221ENST00000552022 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.35■□□□□ 0.53
CACNB3-221ENST00000552022 KIF3CO14782 793 aa18.34■□□□□ 0.53
CACNB3-221ENST00000552022 NME9Q86XW9 330 aa18.34■□□□□ 0.53
CACNB3-221ENST00000552022 CCNL1Q9UK58 526 aaPredicted RBP18.34■□□□□ 0.53
CACNB3-221ENST00000552022 DNAJC5GQ8N7S2 189 aa18.33■□□□□ 0.52
CACNB3-221ENST00000552022 APLP1P51693 650 aa18.3■□□□□ 0.52
CACNB3-221ENST00000552022 C5P01031 1676 aa18.3■□□□□ 0.52
CACNB3-221ENST00000552022 TAF1LQ8IZX4 1826 aa18.3■□□□□ 0.52
CACNB3-221ENST00000552022 RGPD2P0DJD1 1756 aa18.3■□□□□ 0.52
CACNB3-221ENST00000552022 SBNO2Q9Y2G9 1366 aa18.3■□□□□ 0.52
CACNB3-221ENST00000552022 FAM208AQ9UK61 1670 aaKnown RBP18.29■□□□□ 0.52
CACNB3-221ENST00000552022 WWC3Q9ULE0 1092 aa18.28■□□□□ 0.52
CACNB3-221ENST00000552022 CD163L1Q9NR16 1453 aa18.27■□□□□ 0.52
CACNB3-221ENST00000552022 IP6K1Q92551 441 aa18.27■□□□□ 0.52
CACNB3-221ENST00000552022 LTV1Q96GA3 475 aaPredicted RBP18.27■□□□□ 0.52
CACNB3-221ENST00000552022 IGSF1Q8N6C5 1336 aa18.26■□□□□ 0.51
CACNB3-221ENST00000552022 ZCRB1Q8TBF4 217 aaKnown RBP18.26■□□□□ 0.51
CACNB3-221ENST00000552022 USP47Q96K76 1375 aa18.26■□□□□ 0.51
CACNB3-221ENST00000552022 FLAD1Q8NFF5 587 aa18.24■□□□□ 0.51
CACNB3-221ENST00000552022 TOMM70O94826 608 aa18.23■□□□□ 0.51
CACNB3-221ENST00000552022 COL13A1Q5TAT6 717 aaPredicted RBP18.23■□□□□ 0.51
CACNB3-221ENST00000552022 AMIGO3Q86WK7 504 aa18.22■□□□□ 0.51
CACNB3-221ENST00000552022 TOGARAM1Q9Y4F4 1720 aa18.22■□□□□ 0.51
CACNB3-221ENST00000552022 MEGF6O75095 1541 aa18.22■□□□□ 0.51
CACNB3-221ENST00000552022 WDR90Q96KV7 1748 aa18.21■□□□□ 0.51
CACNB3-221ENST00000552022 UBR3Q6ZT12 1888 aa18.21■□□□□ 0.51
CACNB3-221ENST00000552022 L3MBTL2Q969R5 705 aa18.21■□□□□ 0.51
CACNB3-221ENST00000552022 C4BP0C0L5 1744 aa18.2■□□□□ 0.5
CACNB3-221ENST00000552022 CICQ96RK0 1608 aaPredicted RBP18.2■□□□□ 0.5
CACNB3-221ENST00000552022 PCNTO95613 3336 aa18.2■□□□□ 0.5
CACNB3-221ENST00000552022 SMIM5Q71RC9 77 aa18.19■□□□□ 0.5
CACNB3-221ENST00000552022 SLC12A5Q9H2X9 1139 aa18.19■□□□□ 0.5
CACNB3-221ENST00000552022 EDC4Q6P2E9 1401 aaKnown RBP18.18■□□□□ 0.5
CACNB3-221ENST00000552022 CAPN15O75808 1086 aa18.18■□□□□ 0.5
CACNB3-221ENST00000552022 TMC1Q8TDI8 760 aa18.18■□□□□ 0.5
CACNB3-221ENST00000552022 ROCK2O75116 1388 aaKnown RBP18.17■□□□□ 0.5
CACNB3-221ENST00000552022 FBLN1P23142 703 aa18.17■□□□□ 0.5
CACNB3-221ENST00000552022 HOXC9P31274 260 aa18.17■□□□□ 0.5
CACNB3-221ENST00000552022 HDGFL2Q7Z4V5 671 aaPredicted RBP18.17■□□□□ 0.5
CACNB3-221ENST00000552022 PALLDQ8WX93 1383 aa18.17■□□□□ 0.5
CACNB3-221ENST00000552022 ITGB4P16144 1822 aa18.16■□□□□ 0.5
CACNB3-221ENST00000552022 NMRK2Q9NPI5 230 aa18.16■□□□□ 0.5
CACNB3-221ENST00000552022 MAP3K19Q56UN5 1328 aa18.16■□□□□ 0.5
CACNB3-221ENST00000552022 HMGB2P26583 209 aaKnown RBP18.15■□□□□ 0.5
CACNB3-221ENST00000552022 HTRA3P83110 453 aa18.15■□□□□ 0.5
CACNB3-221ENST00000552022 NBPF6Q5VWK0 638 aa18.15■□□□□ 0.5
CACNB3-221ENST00000552022 JMYQ8N9B5 988 aa18.15■□□□□ 0.5
CACNB3-221ENST00000552022 KLRG1Q96E93 195 aa18.15■□□□□ 0.5
CACNB3-221ENST00000552022 NBPF4Q96M43 638 aa18.15■□□□□ 0.5
CACNB3-221ENST00000552022 KIAA1551Q9HCM1 1747 aa18.15■□□□□ 0.5
CACNB3-221ENST00000552022 N4BP2Q86UW6 1770 aaPredicted RBP18.14■□□□□ 0.5
CACNB3-221ENST00000552022 KIF13BQ9NQT8 1826 aa18.14■□□□□ 0.5
CACNB3-221ENST00000552022 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.14■□□□□ 0.49
CACNB3-221ENST00000552022 PHF14O94880 888 aa18.14■□□□□ 0.49
CACNB3-221ENST00000552022 MPRIPQ6WCQ1 1025 aa18.14■□□□□ 0.49
CACNB3-221ENST00000552022 AK7Q96M32 723 aa18.14■□□□□ 0.49
CACNB3-221ENST00000552022 A0A1W2PP64 1363 aa18.14■□□□□ 0.49
CACNB3-221ENST00000552022 AMPHP49418 695 aa18.13■□□□□ 0.49
CACNB3-221ENST00000552022 USHBP1Q8N6Y0 703 aa18.12■□□□□ 0.49
CACNB3-221ENST00000552022 TERF2IPQ9NYB0 399 aa18.12■□□□□ 0.49
CACNB3-221ENST00000552022 CGNL1Q0VF96 1302 aa18.12■□□□□ 0.49
CACNB3-221ENST00000552022 MAP2P11137 1827 aaKnown RBP18.12■□□□□ 0.49
CACNB3-221ENST00000552022 PRELPP51888 382 aa18.11■□□□□ 0.49
CACNB3-221ENST00000552022 RBM46Q8TBY0 533 aaKnown RBP18.11■□□□□ 0.49
CACNB3-221ENST00000552022 PXDNLA1KZ92 1463 aa18.1■□□□□ 0.49
CACNB3-221ENST00000552022 TNS4Q8IZW8 715 aa18.1■□□□□ 0.49
CACNB3-221ENST00000552022 SSFA2P28290 1259 aa18.09■□□□□ 0.49
CACNB3-221ENST00000552022 RAPGEF4Q8WZA2 1011 aa18.09■□□□□ 0.49
CACNB3-221ENST00000552022 COG3Q96JB2 828 aa18.09■□□□□ 0.49
CACNB3-221ENST00000552022 NSD3Q9BZ95 1437 aa18.08■□□□□ 0.49
CACNB3-221ENST00000552022 BRCA1P38398 1863 aaKnown RBP18.08■□□□□ 0.49
CACNB3-221ENST00000552022 PCDH11XQ9BZA7 1347 aa18.08■□□□□ 0.49
CACNB3-221ENST00000552022 PCDH11YQ9BZA8 1340 aa18.08■□□□□ 0.49
CACNB3-221ENST00000552022 ARHGAP27Q6ZUM4 889 aa18.08■□□□□ 0.48
CACNB3-221ENST00000552022 SMARCC1Q92922 1105 aaPredicted RBP18.08■□□□□ 0.48
CACNB3-221ENST00000552022 BCS1LQ9Y276 419 aa18.08■□□□□ 0.48
CACNB3-221ENST00000552022 A0A0G2JLW4 131 aa18.07■□□□□ 0.48
CACNB3-221ENST00000552022 CYP27B1O15528 508 aa18.07■□□□□ 0.48
CACNB3-221ENST00000552022 TATP17735 454 aaPredicted RBP18.07■□□□□ 0.48
CACNB3-221ENST00000552022 LINC00116Q8NCU8 138 aa18.07■□□□□ 0.48
CACNB3-221ENST00000552022 MMP10P09238 476 aa18.06■□□□□ 0.48
CACNB3-221ENST00000552022 TGFB2P61812 414 aa18.06■□□□□ 0.48
CACNB3-221ENST00000552022 PIGBQ92521 554 aa18.06■□□□□ 0.48
CACNB3-221ENST00000552022 FSTL1Q12841 308 aa18.05■□□□□ 0.48
CACNB3-221ENST00000552022 RRS1Q15050 365 aaKnown RBP18.05■□□□□ 0.48
CACNB3-221ENST00000552022 SIN3AQ96ST3 1273 aa18.05■□□□□ 0.48
CACNB3-221ENST00000552022 RTL1A6NKG5 1358 aa18.04■□□□□ 0.48
CACNB3-221ENST00000552022 ARFGEF1Q9Y6D6 1849 aa18.03■□□□□ 0.48
CACNB3-221ENST00000552022 LOC102724428A0A0B4J2F2 783 aa18.03■□□□□ 0.48
CACNB3-221ENST00000552022 SIK1P57059 783 aa18.03■□□□□ 0.48
CACNB3-221ENST00000552022 C16orf71Q8IYS4 520 aaPredicted RBP18.03■□□□□ 0.48
CACNB3-221ENST00000552022 GNPATO15228 680 aa18.02■□□□□ 0.48
CACNB3-221ENST00000552022 DPEP1P16444 411 aa18.02■□□□□ 0.48
CACNB3-221ENST00000552022 ITPK1Q13572 414 aa18.02■□□□□ 0.48
CACNB3-221ENST00000552022 C9orf131Q5VYM1 1079 aa18.02■□□□□ 0.48
CACNB3-221ENST00000552022 PKD1L3Q7Z443 1732 aa18.02■□□□□ 0.48
CACNB3-221ENST00000552022 PUS7Q96PZ0 661 aaKnown RBP18.02■□□□□ 0.48
CACNB3-221ENST00000552022 FCHSD2O94868 740 aa18.01■□□□□ 0.47
CACNB3-221ENST00000552022 C10orf71Q711Q0 1435 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms