RNA–Protein interactions for RNA: ENST00000551989.1

CCNT1-204, Transcript of cyclin T1, humanhuman

TSL 2

Gene CCNT1, Length 726 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1-204ENST00000551989 DZIP1LQ8IYY4 767 aaKnown RBP6.81□□□□□ -1.32
CCNT1-204ENST00000551989 TBC1D32Q96NH3 1257 aa6.81□□□□□ -1.32
CCNT1-204ENST00000551989 SLC12A5Q9H2X9 1139 aa6.81□□□□□ -1.32
CCNT1-204ENST00000551989 ISY1Q9ULR0 285 aaKnown RBP6.81□□□□□ -1.32
CCNT1-204ENST00000551989 COG6Q9Y2V7 657 aa6.81□□□□□ -1.32
CCNT1-204ENST00000551989 N4BP2Q86UW6 1770 aaPredicted RBP6.81□□□□□ -1.32
CCNT1-204ENST00000551989 FAM135BQ49AJ0 1406 aa6.81□□□□□ -1.32
CCNT1-204ENST00000551989 NALCNQ8IZF0 1738 aa6.81□□□□□ -1.32
CCNT1-204ENST00000551989 KIF24Q5T7B8 1368 aa6.81□□□□□ -1.32
CCNT1-204ENST00000551989 TOPAZ1Q8N9V7 1692 aa6.81□□□□□ -1.32
CCNT1-204ENST00000551989 USP19O94966 1318 aa6.8□□□□□ -1.32
CCNT1-204ENST00000551989 KIF3CO14782 793 aa6.8□□□□□ -1.32
CCNT1-204ENST00000551989 IGHDP01880 384 aa6.8□□□□□ -1.32
CCNT1-204ENST00000551989 U2AF1L5P0DN76 240 aaPredicted RBP6.8□□□□□ -1.32
CCNT1-204ENST00000551989 NLRP6P59044 892 aa6.8□□□□□ -1.32
CCNT1-204ENST00000551989 U2AF1Q01081 240 aaKnown RBP eCLIP6.8□□□□□ -1.32
CCNT1-204ENST00000551989 PTCH1Q13635 1447 aa6.8□□□□□ -1.32
CCNT1-204ENST00000551989 GGT6Q6P531 493 aa6.8□□□□□ -1.32
CCNT1-204ENST00000551989 DIP2BQ9P265 1576 aa6.8□□□□□ -1.32
CCNT1-204ENST00000551989 AATKQ6ZMQ8 1374 aa6.8□□□□□ -1.32
CCNT1-204ENST00000551989 PIK3R4Q99570 1358 aa6.8□□□□□ -1.32
CCNT1-204ENST00000551989 NRXN3Q9Y4C0 1643 aa6.79□□□□□ -1.32
CCNT1-204ENST00000551989 FMN2Q9NZ56 1722 aa6.79□□□□□ -1.32
CCNT1-204ENST00000551989 EDC4Q6P2E9 1401 aaKnown RBP6.79□□□□□ -1.32
CCNT1-204ENST00000551989 FCHSD2O94868 740 aa6.79□□□□□ -1.32
CCNT1-204ENST00000551989 TMPOP42166 694 aaKnown RBP6.79□□□□□ -1.32
CCNT1-204ENST00000551989 LMOD3Q0VAK6 560 aa6.79□□□□□ -1.32
CCNT1-204ENST00000551989 SMC5Q8IY18 1101 aa6.79□□□□□ -1.32
CCNT1-204ENST00000551989 PANK1Q8TE04 598 aa6.79□□□□□ -1.32
CCNT1-204ENST00000551989 ARHGAP45Q92619 1136 aa6.79□□□□□ -1.32
CCNT1-204ENST00000551989 FRAT1Q92837 279 aaPredicted RBP6.79□□□□□ -1.32
CCNT1-204ENST00000551989 PLEKHF1Q96S99 279 aa6.79□□□□□ -1.32
CCNT1-204ENST00000551989 PDZRN3Q9UPQ7 1066 aa6.79□□□□□ -1.32
CCNT1-204ENST00000551989 TECPR2O15040 1411 aa6.78□□□□□ -1.32
CCNT1-204ENST00000551989 DIAPH1O60610 1272 aaKnown RBP6.78□□□□□ -1.32
CCNT1-204ENST00000551989 ARSIQ5FYB1 569 aa6.78□□□□□ -1.32
CCNT1-204ENST00000551989 ATF7IPQ6VMQ6 1270 aa6.78□□□□□ -1.32
CCNT1-204ENST00000551989 MFRPQ9BY79 579 aa6.78□□□□□ -1.32
CCNT1-204ENST00000551989 BCL11BQ9C0K0 894 aaPredicted RBP6.78□□□□□ -1.32
CCNT1-204ENST00000551989 NCOA3Q9Y6Q9 1424 aa6.77□□□□□ -1.33
CCNT1-204ENST00000551989 SRPK2P78362 688 aaKnown RBP6.77□□□□□ -1.33
CCNT1-204ENST00000551989 TMEM132AQ24JP5 1023 aa6.77□□□□□ -1.33
CCNT1-204ENST00000551989 RNF166Q96A37 237 aaPredicted RBP6.77□□□□□ -1.33
CCNT1-204ENST00000551989 GCC1Q96CN9 775 aa6.77□□□□□ -1.33
CCNT1-204ENST00000551989 SIRT1Q96EB6 747 aa6.77□□□□□ -1.33
CCNT1-204ENST00000551989 SMC4Q9NTJ3 1288 aa6.77□□□□□ -1.33
CCNT1-204ENST00000551989 PCDHB15Q9Y5E8 787 aa6.77□□□□□ -1.33
CCNT1-204ENST00000551989 USP54Q70EL1 1684 aa6.77□□□□□ -1.33
CCNT1-204ENST00000551989 CPSF1Q10570 1443 aaKnown RBP6.76□□□□□ -1.33
CCNT1-204ENST00000551989 YEATS2Q9ULM3 1422 aa6.76□□□□□ -1.33
CCNT1-204ENST00000551989 RGPD1P0DJD0 1748 aa6.76□□□□□ -1.33
CCNT1-204ENST00000551989 DDX11L8A8MPP1 907 aa6.76□□□□□ -1.33
CCNT1-204ENST00000551989 IDI1Q13907 227 aa6.76□□□□□ -1.33
CCNT1-204ENST00000551989 TMEM132EQ6IEE7 984 aa6.76□□□□□ -1.33
CCNT1-204ENST00000551989 C14orf37Q86TY3 774 aa6.76□□□□□ -1.33
CCNT1-204ENST00000551989 SNX21Q969T3 373 aa6.76□□□□□ -1.33
CCNT1-204ENST00000551989 CHMP5Q9NZZ3 219 aa6.76□□□□□ -1.33
CCNT1-204ENST00000551989 A2ML1A8K2U0 1454 aa6.76□□□□□ -1.33
CCNT1-204ENST00000551989 FYB1O15117 783 aa6.75□□□□□ -1.33
CCNT1-204ENST00000551989 RLBP1P12271 317 aa6.75□□□□□ -1.33
CCNT1-204ENST00000551989 TRIM27P14373 513 aa6.75□□□□□ -1.33
CCNT1-204ENST00000551989 RBM25P49756 843 aaKnown RBP6.75□□□□□ -1.33
CCNT1-204ENST00000551989 GNAI1P63096 354 aa6.75□□□□□ -1.33
CCNT1-204ENST00000551989 NEUROD2Q15784 382 aa6.75□□□□□ -1.33
CCNT1-204ENST00000551989 HSCBQ8IWL3 235 aa6.75□□□□□ -1.33
CCNT1-204ENST00000551989 FAM43AQ8N2R8 423 aa6.75□□□□□ -1.33
CCNT1-204ENST00000551989 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.75□□□□□ -1.33
CCNT1-204ENST00000551989 IL27Q8NEV9 243 aa6.75□□□□□ -1.33
CCNT1-204ENST00000551989 ANTXR1Q9H6X2 564 aa6.75□□□□□ -1.33
CCNT1-204ENST00000551989 IFT57Q9NWB7 429 aa6.75□□□□□ -1.33
CCNT1-204ENST00000551989 POGKQ9P215 609 aa6.75□□□□□ -1.33
CCNT1-204ENST00000551989 UBR1Q8IWV7 1749 aa6.75□□□□□ -1.33
CCNT1-204ENST00000551989 RIMS2Q9UQ26 1411 aa6.75□□□□□ -1.33
CCNT1-204ENST00000551989 FRAT2O75474 233 aaPredicted RBP6.74□□□□□ -1.33
CCNT1-204ENST00000551989 PTGER2P43116 358 aa6.74□□□□□ -1.33
CCNT1-204ENST00000551989 HDGFP51858 240 aaKnown RBP6.74□□□□□ -1.33
CCNT1-204ENST00000551989 RIPK4P57078 832 aa6.74□□□□□ -1.33
CCNT1-204ENST00000551989 EXOSC9Q06265 439 aaKnown RBP6.74□□□□□ -1.33
CCNT1-204ENST00000551989 BMP2KLQ5H9B9 411 aa6.74□□□□□ -1.33
CCNT1-204ENST00000551989 SKAP1Q86WV1 359 aa6.74□□□□□ -1.33
CCNT1-204ENST00000551989 ITPRIPQ8IWB1 547 aa6.74□□□□□ -1.33
CCNT1-204ENST00000551989 SSH1Q8WYL5 1049 aa6.74□□□□□ -1.33
CCNT1-204ENST00000551989 KHSRPQ92945 711 aaKnown RBP eCLIP6.74□□□□□ -1.33
CCNT1-204ENST00000551989 C22orf23Q9BZE7 217 aa6.74□□□□□ -1.33
CCNT1-204ENST00000551989 ZBTB40Q9NUA8 1239 aa6.74□□□□□ -1.33
CCNT1-204ENST00000551989 RRP7AQ9Y3A4 280 aaKnown RBP6.74□□□□□ -1.33
CCNT1-204ENST00000551989 TUBGCP6Q96RT7 1819 aa6.73□□□□□ -1.33
CCNT1-204ENST00000551989 TSPOAP1O95153 1857 aa6.73□□□□□ -1.33
CCNT1-204ENST00000551989 U2SURPO15042 1029 aaKnown RBP6.73□□□□□ -1.33
CCNT1-204ENST00000551989 SLC34A2O95436 690 aa6.73□□□□□ -1.33
CCNT1-204ENST00000551989 TNNT2P45379 298 aaPredicted RBP6.73□□□□□ -1.33
CCNT1-204ENST00000551989 NUCB1Q02818 461 aa6.73□□□□□ -1.33
CCNT1-204ENST00000551989 NFE2L2Q16236 605 aa6.73□□□□□ -1.33
CCNT1-204ENST00000551989 PRAM1Q96QH2 718 aa6.73□□□□□ -1.33
CCNT1-204ENST00000551989 TBC1D2Q9BYX2 928 aa6.73□□□□□ -1.33
CCNT1-204ENST00000551989 API5Q9BZZ5 524 aaKnown RBP6.73□□□□□ -1.33
CCNT1-204ENST00000551989 STK24Q9Y6E0 443 aa6.73□□□□□ -1.33
CCNT1-204ENST00000551989 DIP2AQ14689 1571 aa6.73□□□□□ -1.33
CCNT1-204ENST00000551989 ABCC4O15439 1325 aa6.73□□□□□ -1.33
CCNT1-204ENST00000551989 C2orf72A6NCS6 295 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms