RNA–Protein interactions for RNA: ENST00000551787.5

BRF1-219, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 1 (best) BASIC

Gene BRF1, Length 824 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-219ENST00000551787 EIF4A2Q14240 407 aaKnown RBP22.83■■□□□ 1.25
BRF1-219ENST00000551787 FAM208AQ9UK61 1670 aaKnown RBP22.83■■□□□ 1.24
BRF1-219ENST00000551787 MAP2P11137 1827 aaKnown RBP22.82■■□□□ 1.24
BRF1-219ENST00000551787 PARD3Q8TEW0 1356 aa22.82■■□□□ 1.24
BRF1-219ENST00000551787 PLSCR1O15162 318 aa22.82■■□□□ 1.24
BRF1-219ENST00000551787 SBF2Q86WG5 1849 aa22.82■■□□□ 1.24
BRF1-219ENST00000551787 PROM2Q8N271 834 aa22.81■■□□□ 1.24
BRF1-219ENST00000551787 SYTL4Q96C24 671 aaPredicted RBP22.8■■□□□ 1.24
BRF1-219ENST00000551787 KAT6BQ8WYB5 2073 aa22.78■■□□□ 1.24
BRF1-219ENST00000551787 PRIM1P49642 420 aaKnown RBP22.78■■□□□ 1.24
BRF1-219ENST00000551787 ANKRD26Q9UPS8 1709 aa22.78■■□□□ 1.24
BRF1-219ENST00000551787 NBPF14Q5TI25 921 aa22.77■■□□□ 1.24
BRF1-219ENST00000551787 TXNRD1Q16881 649 aa22.76■■□□□ 1.23
BRF1-219ENST00000551787 CYP27B1O15528 508 aa22.74■■□□□ 1.23
BRF1-219ENST00000551787 MTHFSP49914 203 aa22.74■■□□□ 1.23
BRF1-219ENST00000551787 PCDH11XQ9BZA7 1347 aa22.72■■□□□ 1.23
BRF1-219ENST00000551787 PCDH11YQ9BZA8 1340 aa22.72■■□□□ 1.23
BRF1-219ENST00000551787 ANO8Q9HCE9 1232 aaPredicted RBP22.71■■□□□ 1.23
BRF1-219ENST00000551787 SPG7Q9UQ90 795 aa22.71■■□□□ 1.23
BRF1-219ENST00000551787 AEBP1Q8IUX7 1158 aa22.7■■□□□ 1.22
BRF1-219ENST00000551787 NCAPD2Q15021 1401 aa22.7■■□□□ 1.22
BRF1-219ENST00000551787 NHSQ6T4R5 1651 aa22.7■■□□□ 1.22
BRF1-219ENST00000551787 RREB1Q92766 1687 aa22.69■■□□□ 1.22
BRF1-219ENST00000551787 NUP188Q5SRE5 1749 aa22.68■■□□□ 1.22
BRF1-219ENST00000551787 IGSF1Q8N6C5 1336 aa22.68■■□□□ 1.22
BRF1-219ENST00000551787 IL13P35225 146 aa22.68■■□□□ 1.22
BRF1-219ENST00000551787 KCNQ4P56696 695 aa22.68■■□□□ 1.22
BRF1-219ENST00000551787 SHANK3Q9BYB0 1731 aa22.68■■□□□ 1.22
BRF1-219ENST00000551787 SULT6B1Q6IMI4 303 aa22.67■■□□□ 1.22
BRF1-219ENST00000551787 MPRIPQ6WCQ1 1025 aa22.67■■□□□ 1.22
BRF1-219ENST00000551787 LRRC4BQ9NT99 713 aa22.66■■□□□ 1.22
BRF1-219ENST00000551787 PDGFDQ9GZP0 370 aaPredicted RBP22.65■■□□□ 1.22
BRF1-219ENST00000551787 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.65■■□□□ 1.225e-8■■■■□ 20
BRF1-219ENST00000551787 NPC1L1Q9UHC9 1359 aa22.64■■□□□ 1.22
BRF1-219ENST00000551787 BTAF1O14981 1849 aa22.64■■□□□ 1.22
BRF1-219ENST00000551787 STK32BQ9NY57 414 aa22.64■■□□□ 1.21
BRF1-219ENST00000551787 PHKG2P15735 406 aa22.63■■□□□ 1.21
BRF1-219ENST00000551787 IFNL2Q8IZJ0 200 aa22.63■■□□□ 1.21
BRF1-219ENST00000551787 NKX1-1Q15270 411 aaPredicted RBP22.62■■□□□ 1.21
BRF1-219ENST00000551787 RGPD3A6NKT7 1758 aaPredicted RBP22.61■■□□□ 1.21
BRF1-219ENST00000551787 RGPD4Q7Z3J3 1758 aa22.61■■□□□ 1.21
BRF1-219ENST00000551787 DIAPH1O60610 1272 aaKnown RBP22.61■■□□□ 1.21
BRF1-219ENST00000551787 SLC15A2Q16348 729 aa22.61■■□□□ 1.21
BRF1-219ENST00000551787 PLEKHO1Q53GL0 409 aaPredicted RBP22.61■■□□□ 1.21
BRF1-219ENST00000551787 DOT1LQ8TEK3 1739 aa22.61■■□□□ 1.21
BRF1-219ENST00000551787 HMOX1P09601 288 aa22.6■■□□□ 1.21
BRF1-219ENST00000551787 ZNF530Q6P9A1 599 aaPredicted RBP22.59■■□□□ 1.21
BRF1-219ENST00000551787 PIGBQ92521 554 aa22.59■■□□□ 1.21
BRF1-219ENST00000551787 ZNF827Q17R98 1081 aa22.58■■□□□ 1.21
BRF1-219ENST00000551787 SLC27A3Q5K4L6 730 aa22.58■■□□□ 1.21
BRF1-219ENST00000551787 PKD1L3Q7Z443 1732 aa22.57■■□□□ 1.2
BRF1-219ENST00000551787 AMOTQ4VCS5 1084 aa22.57■■□□□ 1.2
BRF1-219ENST00000551787 CCNL1Q9UK58 526 aaPredicted RBP22.57■■□□□ 1.2
BRF1-219ENST00000551787 U2SURPO15042 1029 aaKnown RBP22.56■■□□□ 1.2
BRF1-219ENST00000551787 ZBTB7AO95365 584 aa22.56■■□□□ 1.2
BRF1-219ENST00000551787 TMOD3Q9NYL9 352 aa22.55■■□□□ 1.2
BRF1-219ENST00000551787 KDRP35968 1356 aa22.54■■□□□ 1.2
BRF1-219ENST00000551787 PPP2R1AP30153 589 aa22.54■■□□□ 1.2
BRF1-219ENST00000551787 SPON1Q9HCB6 807 aa22.53■■□□□ 1.2
BRF1-219ENST00000551787 ATF5Q9Y2D1 282 aaPredicted RBP22.53■■□□□ 1.2
BRF1-219ENST00000551787 PALLDQ8WX93 1383 aa22.52■■□□□ 1.2
BRF1-219ENST00000551787 DDX10Q13206 875 aaKnown RBP22.52■■□□□ 1.2
BRF1-219ENST00000551787 C1orf141Q5JVX7 400 aa22.52■■□□□ 1.2
BRF1-219ENST00000551787 AKT1S1Q96B36 256 aa22.52■■□□□ 1.2
BRF1-219ENST00000551787 ASAP1Q9ULH1 1129 aa22.52■■□□□ 1.2
BRF1-219ENST00000551787 TOGARAM1Q9Y4F4 1720 aa22.51■■□□□ 1.19
BRF1-219ENST00000551787 SMARCC1Q92922 1105 aaPredicted RBP22.51■■□□□ 1.19
BRF1-219ENST00000551787 DCAF5Q96JK2 942 aa22.51■■□□□ 1.19
BRF1-219ENST00000551787 TFCP2L1Q9NZI6 479 aa22.51■■□□□ 1.19
BRF1-219ENST00000551787 HSP90AB1P08238 724 aaKnown RBP22.5■■□□□ 1.19
BRF1-219ENST00000551787 CFAP53Q96M91 514 aa22.5■■□□□ 1.19
BRF1-219ENST00000551787 ERVV-2B6SEH9 535 aa22.49■■□□□ 1.19
BRF1-219ENST00000551787 PLEKHG2Q9H7P9 1386 aa22.49■■□□□ 1.19
BRF1-219ENST00000551787 COL3A1P02461 1466 aaPredicted RBP22.48■■□□□ 1.19
BRF1-219ENST00000551787 CABP4P57796 275 aa22.48■■□□□ 1.19
BRF1-219ENST00000551787 ATG3Q9NT62 314 aa22.48■■□□□ 1.19
BRF1-219ENST00000551787 LRP5O75197 1615 aa22.48■■□□□ 1.19
BRF1-219ENST00000551787 MTHFSDQ2M296 383 aaKnown RBP22.47■■□□□ 1.19
BRF1-219ENST00000551787 PPP1R1BQ9UD71 204 aaPredicted RBP22.47■■□□□ 1.19
BRF1-219ENST00000551787 KDM6AO15550 1401 aaPredicted RBP22.47■■□□□ 1.19
BRF1-219ENST00000551787 PAPPAQ13219 1627 aa22.46■■□□□ 1.19
BRF1-219ENST00000551787 ITGB4P16144 1822 aa22.46■■□□□ 1.19
BRF1-219ENST00000551787 LOC102724428A0A0B4J2F2 783 aa22.45■■□□□ 1.18
BRF1-219ENST00000551787 SIK1P57059 783 aa22.45■■□□□ 1.18
BRF1-219ENST00000551787 NFATC2IPQ8NCF5 419 aa22.45■■□□□ 1.18
BRF1-219ENST00000551787 LGR6Q9HBX8 967 aa22.45■■□□□ 1.18
BRF1-219ENST00000551787 LY75O60449 1722 aa22.45■■□□□ 1.18
BRF1-219ENST00000551787 AKAP4Q5JQC9 854 aa22.44■■□□□ 1.18
BRF1-219ENST00000551787 PNPLA7Q6ZV29 1317 aa22.44■■□□□ 1.18
BRF1-219ENST00000551787 MSH5O43196 834 aa22.43■■□□□ 1.18
BRF1-219ENST00000551787 PTGER2P43116 358 aa22.43■■□□□ 1.18
BRF1-219ENST00000551787 MTFR1LQ9H019 292 aa22.43■■□□□ 1.18
BRF1-219ENST00000551787 CASZ1Q86V15 1759 aa22.43■■□□□ 1.18
BRF1-219ENST00000551787 U2AF1L5P0DN76 240 aaPredicted RBP22.42■■□□□ 1.18
BRF1-219ENST00000551787 ZEB1P37275 1124 aaPredicted RBP22.42■■□□□ 1.18
BRF1-219ENST00000551787 ATP6V1AP38606 617 aa22.42■■□□□ 1.18
BRF1-219ENST00000551787 U2AF1Q01081 240 aaKnown RBP eCLIP22.42■■□□□ 1.18
BRF1-219ENST00000551787 SMIM5Q71RC9 77 aa22.42■■□□□ 1.18
BRF1-219ENST00000551787 NUDCQ9Y266 331 aa22.42■■□□□ 1.18
BRF1-219ENST00000551787 ITPK1Q13572 414 aa22.41■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms