RNA–Protein interactions for RNA: ENST00000551716.5

CACNB3-220, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 544 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-220ENST00000551716 USP47Q96K76 1375 aa21.82■■□□□ 1.08
CACNB3-220ENST00000551716 ADCY9O60503 1353 aa21.8■■□□□ 1.08
CACNB3-220ENST00000551716 ROCK2O75116 1388 aaKnown RBP21.8■■□□□ 1.08
CACNB3-220ENST00000551716 SBNO2Q9Y2G9 1366 aa21.8■■□□□ 1.08
CACNB3-220ENST00000551716 ZNF526Q8TF50 670 aaPredicted RBP21.8■■□□□ 1.08
CACNB3-220ENST00000551716 TERF2IPQ9NYB0 399 aa21.8■■□□□ 1.08
CACNB3-220ENST00000551716 MSL1Q68DK7 614 aa21.79■■□□□ 1.08
CACNB3-220ENST00000551716 TMC1Q8TDI8 760 aa21.79■■□□□ 1.08
CACNB3-220ENST00000551716 LTV1Q96GA3 475 aaPredicted RBP21.79■■□□□ 1.08
CACNB3-220ENST00000551716 NSD2O96028 1365 aa21.77■■□□□ 1.08
CACNB3-220ENST00000551716 APLP1P51693 650 aa21.77■■□□□ 1.08
CACNB3-220ENST00000551716 CGNL1Q0VF96 1302 aa21.77■■□□□ 1.07
CACNB3-220ENST00000551716 EDC4Q6P2E9 1401 aaKnown RBP21.76■■□□□ 1.07
CACNB3-220ENST00000551716 USP54Q70EL1 1684 aa21.75■■□□□ 1.07
CACNB3-220ENST00000551716 MON2Q7Z3U7 1717 aa21.74■■□□□ 1.07
CACNB3-220ENST00000551716 LY75O60449 1722 aa21.73■■□□□ 1.07
CACNB3-220ENST00000551716 SLC12A5Q9H2X9 1139 aa21.73■■□□□ 1.07
CACNB3-220ENST00000551716 LTN1O94822 1766 aa21.73■■□□□ 1.07
CACNB3-220ENST00000551716 KIF3CO14782 793 aa21.72■■□□□ 1.07
CACNB3-220ENST00000551716 AMPHP49418 695 aa21.72■■□□□ 1.07
CACNB3-220ENST00000551716 CD163L1Q9NR16 1453 aa21.71■■□□□ 1.07
CACNB3-220ENST00000551716 TUBGCP6Q96RT7 1819 aa21.71■■□□□ 1.07
CACNB3-220ENST00000551716 PUS7Q96PZ0 661 aaKnown RBP21.71■■□□□ 1.07
CACNB3-220ENST00000551716 HOXC9P31274 260 aa21.7■■□□□ 1.06
CACNB3-220ENST00000551716 COG3Q96JB2 828 aa21.7■■□□□ 1.06
CACNB3-220ENST00000551716 IGSF1Q8N6C5 1336 aa21.7■■□□□ 1.06
CACNB3-220ENST00000551716 TOMM70O94826 608 aa21.69■■□□□ 1.06
CACNB3-220ENST00000551716 RAPGEF4Q8WZA2 1011 aa21.69■■□□□ 1.06
CACNB3-220ENST00000551716 FAM208AQ9UK61 1670 aaKnown RBP21.69■■□□□ 1.06
CACNB3-220ENST00000551716 SMARCC1Q92922 1105 aaPredicted RBP21.68■■□□□ 1.06
CACNB3-220ENST00000551716 AK7Q96M32 723 aa21.68■■□□□ 1.06
CACNB3-220ENST00000551716 MAP3K19Q56UN5 1328 aa21.68■■□□□ 1.06
CACNB3-220ENST00000551716 DNAJC5GQ8N7S2 189 aa21.67■■□□□ 1.06
CACNB3-220ENST00000551716 NSD3Q9BZ95 1437 aa21.66■■□□□ 1.06
CACNB3-220ENST00000551716 PALLDQ8WX93 1383 aa21.65■■□□□ 1.06
CACNB3-220ENST00000551716 DOT1LQ8TEK3 1739 aa21.65■■□□□ 1.06
CACNB3-220ENST00000551716 A0A1W2PP64 1363 aa21.64■■□□□ 1.06
CACNB3-220ENST00000551716 TATP17735 454 aaPredicted RBP21.64■■□□□ 1.05
CACNB3-220ENST00000551716 MPRIPQ6WCQ1 1025 aa21.64■■□□□ 1.05
CACNB3-220ENST00000551716 PCDH11XQ9BZA7 1347 aa21.63■■□□□ 1.05
CACNB3-220ENST00000551716 PCDH11YQ9BZA8 1340 aa21.63■■□□□ 1.05
CACNB3-220ENST00000551716 NBPF6Q5VWK0 638 aa21.63■■□□□ 1.05
CACNB3-220ENST00000551716 NBPF4Q96M43 638 aa21.63■■□□□ 1.05
CACNB3-220ENST00000551716 MEGF6O75095 1541 aa21.63■■□□□ 1.05
CACNB3-220ENST00000551716 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.62■■□□□ 1.05
CACNB3-220ENST00000551716 SSFA2P28290 1259 aa21.62■■□□□ 1.05
CACNB3-220ENST00000551716 CARD11Q9BXL7 1154 aa21.62■■□□□ 1.05
CACNB3-220ENST00000551716 RTL1A6NKG5 1358 aa21.61■■□□□ 1.05
CACNB3-220ENST00000551716 WWC3Q9ULE0 1092 aa21.6■■□□□ 1.05
CACNB3-220ENST00000551716 SLC24A1O60721 1099 aa21.59■■□□□ 1.05
CACNB3-220ENST00000551716 PHF14O94880 888 aa21.59■■□□□ 1.05
CACNB3-220ENST00000551716 SMG6Q86US8 1419 aaKnown RBP21.59■■□□□ 1.05
CACNB3-220ENST00000551716 TGFB2P61812 414 aa21.58■■□□□ 1.05
CACNB3-220ENST00000551716 NEUROD1Q13562 356 aa21.58■■□□□ 1.05
CACNB3-220ENST00000551716 SIN3AQ96ST3 1273 aa21.58■■□□□ 1.05
CACNB3-220ENST00000551716 C5P01031 1676 aa21.58■■□□□ 1.05
CACNB3-220ENST00000551716 FBLN1P23142 703 aa21.56■■□□□ 1.04
CACNB3-220ENST00000551716 USHBP1Q8N6Y0 703 aa21.56■■□□□ 1.04
CACNB3-220ENST00000551716 RBM46Q8TBY0 533 aaKnown RBP21.56■■□□□ 1.04
CACNB3-220ENST00000551716 C16orf71Q8IYS4 520 aaPredicted RBP21.55■■□□□ 1.04
CACNB3-220ENST00000551716 AMIGO3Q86WK7 504 aa21.54■■□□□ 1.04
CACNB3-220ENST00000551716 LOC102724428A0A0B4J2F2 783 aa21.53■■□□□ 1.04
CACNB3-220ENST00000551716 CYP27B1O15528 508 aa21.53■■□□□ 1.04
CACNB3-220ENST00000551716 SIK1P57059 783 aa21.53■■□□□ 1.04
CACNB3-220ENST00000551716 FSTL1Q12841 308 aa21.53■■□□□ 1.04
CACNB3-220ENST00000551716 RRS1Q15050 365 aaKnown RBP21.53■■□□□ 1.04
CACNB3-220ENST00000551716 ARHGAP27Q6ZUM4 889 aa21.53■■□□□ 1.04
CACNB3-220ENST00000551716 PIGBQ92521 554 aa21.53■■□□□ 1.04
CACNB3-220ENST00000551716 KLRG1Q96E93 195 aa21.53■■□□□ 1.04
CACNB3-220ENST00000551716 BCS1LQ9Y276 419 aa21.53■■□□□ 1.04
CACNB3-220ENST00000551716 C4BP0C0L5 1744 aa21.52■■□□□ 1.04
CACNB3-220ENST00000551716 JMYQ8N9B5 988 aa21.52■■□□□ 1.04
CACNB3-220ENST00000551716 MMP10P09238 476 aa21.51■■□□□ 1.03
CACNB3-220ENST00000551716 NKX1-1Q15270 411 aaPredicted RBP21.51■■□□□ 1.03
CACNB3-220ENST00000551716 NLGN1Q8N2Q7 840 aa21.51■■□□□ 1.03
CACNB3-220ENST00000551716 INSRP06213 1382 aa21.5■■□□□ 1.03
CACNB3-220ENST00000551716 GNPATO15228 680 aa21.5■■□□□ 1.03
CACNB3-220ENST00000551716 NMRK2Q9NPI5 230 aa21.5■■□□□ 1.03
CACNB3-220ENST00000551716 CICQ96RK0 1608 aaPredicted RBP21.5■■□□□ 1.03
CACNB3-220ENST00000551716 COL13A1Q5TAT6 717 aaPredicted RBP21.49■■□□□ 1.03
CACNB3-220ENST00000551716 SMIM5Q71RC9 77 aa21.49■■□□□ 1.03
CACNB3-220ENST00000551716 LINC00116Q8NCU8 138 aa21.49■■□□□ 1.03
CACNB3-220ENST00000551716 SPG7Q9UQ90 795 aa21.49■■□□□ 1.03
CACNB3-220ENST00000551716 KIF24Q5T7B8 1368 aa21.48■■□□□ 1.03
CACNB3-220ENST00000551716 TAF1LQ8IZX4 1826 aa21.48■■□□□ 1.03
CACNB3-220ENST00000551716 A0A0G2JLW4 131 aa21.48■■□□□ 1.03
CACNB3-220ENST00000551716 FYB1O15117 783 aa21.48■■□□□ 1.03
CACNB3-220ENST00000551716 HSP90AB2PQ58FF8 381 aa21.48■■□□□ 1.03
CACNB3-220ENST00000551716 ATP6V1AP38606 617 aa21.47■■□□□ 1.03
CACNB3-220ENST00000551716 TMF1P82094 1093 aa21.47■■□□□ 1.03
CACNB3-220ENST00000551716 TRAPPC3LQ5T215 181 aa21.47■■□□□ 1.03
CACNB3-220ENST00000551716 CCDC87Q9NVE4 849 aa21.47■■□□□ 1.03
CACNB3-220ENST00000551716 TMOD3Q9NYL9 352 aa21.47■■□□□ 1.03
CACNB3-220ENST00000551716 FCHSD2O94868 740 aa21.46■■□□□ 1.03
CACNB3-220ENST00000551716 TNS4Q8IZW8 715 aa21.46■■□□□ 1.03
CACNB3-220ENST00000551716 KDM2BQ8NHM5 1336 aa21.46■■□□□ 1.03
CACNB3-220ENST00000551716 RGPD2P0DJD1 1756 aa21.46■■□□□ 1.03
CACNB3-220ENST00000551716 PXDNLA1KZ92 1463 aa21.45■■□□□ 1.03
CACNB3-220ENST00000551716 PRELPP51888 382 aa21.45■■□□□ 1.02
CACNB3-220ENST00000551716 GGNBP2Q9H3C7 697 aa21.45■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms