RNA–Protein interactions for RNA: ENST00000551644.5

PRKD1-208, Transcript of protein kinase D1, human

TSL 4

Gene PRKD1, Length 560 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKD1-208	ENST00000551644	FAM208A	Q9UK61	1670 aa	Known RBP	13.92	□□□□□ -0.18
PRKD1-208	ENST00000551644	LTN1	O94822	1766 aa		13.92	□□□□□ -0.18
PRKD1-208	ENST00000551644	HMGB2	P26583	209 aa	Known RBP	13.92	□□□□□ -0.18
PRKD1-208	ENST00000551644	KLHL34	Q8N239	644 aa		13.92	□□□□□ -0.18
PRKD1-208	ENST00000551644	AKT1S1	Q96B36	256 aa		13.92	□□□□□ -0.18
PRKD1-208	ENST00000551644	LRRC4B	Q9NT99	713 aa		13.91	□□□□□ -0.18
PRKD1-208	ENST00000551644	TFCP2L1	Q9NZI6	479 aa		13.91	□□□□□ -0.18
PRKD1-208	ENST00000551644	COL24A1	Q17RW2	1714 aa		13.9	□□□□□ -0.18
PRKD1-208	ENST00000551644	GRIN3B	O60391	1043 aa		13.89	□□□□□ -0.19
PRKD1-208	ENST00000551644	PELP1	Q8IZL8	1130 aa	Known RBP	13.89	□□□□□ -0.19
PRKD1-208	ENST00000551644	PNPLA7	Q6ZV29	1317 aa		13.89	□□□□□ -0.19
PRKD1-208	ENST00000551644	DDX54	Q8TDD1	881 aa	Known RBP	13.87	□□□□□ -0.19
PRKD1-208	ENST00000551644	IP6K1	Q92551	441 aa		13.87	□□□□□ -0.19
PRKD1-208	ENST00000551644	SYTL4	Q96C24	671 aa	Predicted RBP	13.87	□□□□□ -0.19
PRKD1-208	ENST00000551644	COG3	Q96JB2	828 aa		13.87	□□□□□ -0.19
PRKD1-208	ENST00000551644	IFFO2	Q5TF58	517 aa		13.86	□□□□□ -0.19
PRKD1-208	ENST00000551644	FBLN1	P23142	703 aa		13.85	□□□□□ -0.19
PRKD1-208	ENST00000551644	GGNBP2	Q9H3C7	697 aa		13.85	□□□□□ -0.19
PRKD1-208	ENST00000551644	LY75	O60449	1722 aa		13.84	□□□□□ -0.19
PRKD1-208	ENST00000551644	DOT1L	Q8TEK3	1739 aa		13.84	□□□□□ -0.19
PRKD1-208	ENST00000551644	SHANK3	Q9BYB0	1731 aa		13.84	□□□□□ -0.19
PRKD1-208	ENST00000551644	NLGN2	Q8NFZ4	835 aa		13.84	□□□□□ -0.19
PRKD1-208	ENST00000551644	CCNL1	Q9UK58	526 aa	Predicted RBP	13.84	□□□□□ -0.19
PRKD1-208	ENST00000551644	MAP3K19	Q56UN5	1328 aa		13.84	□□□□□ -0.19
PRKD1-208	ENST00000551644	MSH5	O43196	834 aa		13.83	□□□□□ -0.2
PRKD1-208	ENST00000551644	PRIM1	P49642	420 aa	Known RBP	13.83	□□□□□ -0.2
PRKD1-208	ENST00000551644	PANK3	Q9H999	370 aa		13.83	□□□□□ -0.2
PRKD1-208	ENST00000551644	CGNL1	Q0VF96	1302 aa		13.83	□□□□□ -0.2
PRKD1-208	ENST00000551644	TUBGCP6	Q96RT7	1819 aa		13.83	□□□□□ -0.2
PRKD1-208	ENST00000551644	RTL1	A6NKG5	1358 aa		13.83	□□□□□ -0.2
PRKD1-208	ENST00000551644	NSD3	Q9BZ95	1437 aa		13.82	□□□□□ -0.2
PRKD1-208	ENST00000551644	HOXC9	P31274	260 aa		13.82	□□□□□ -0.2
PRKD1-208	ENST00000551644	FLAD1	Q8NFF5	587 aa		13.82	□□□□□ -0.2
PRKD1-208	ENST00000551644	ZCRB1	Q8TBF4	217 aa	Known RBP	13.82	□□□□□ -0.2
PRKD1-208	ENST00000551644	LTV1	Q96GA3	475 aa	Predicted RBP	13.82	□□□□□ -0.2
PRKD1-208	ENST00000551644	NSD2	O96028	1365 aa		13.82	□□□□□ -0.2
PRKD1-208	ENST00000551644	PER1	O15534	1290 aa	Predicted RBP	13.81	□□□□□ -0.2
PRKD1-208	ENST00000551644	AMPH	P49418	695 aa		13.81	□□□□□ -0.2
PRKD1-208	ENST00000551644	KIF7	Q2M1P5	1343 aa		13.81	□□□□□ -0.2
PRKD1-208	ENST00000551644	KIF24	Q5T7B8	1368 aa		13.81	□□□□□ -0.2
PRKD1-208	ENST00000551644	SMG6	Q86US8	1419 aa	Known RBP	13.81	□□□□□ -0.2
PRKD1-208	ENST00000551644	CD2AP	Q9Y5K6	639 aa		13.8	□□□□□ -0.2
PRKD1-208	ENST00000551644	KIF20B	Q96Q89	1820 aa		13.8	□□□□□ -0.2
PRKD1-208	ENST00000551644	KAT6B	Q8WYB5	2073 aa		13.79	□□□□□ -0.2
PRKD1-208	ENST00000551644	YBX3	P16989	372 aa	Known RBP eCLIP	13.79	□□□□□ -0.2
PRKD1-208	ENST00000551644	KCNQ4	P56696	695 aa		13.79	□□□□□ -0.2
PRKD1-208	ENST00000551644	GPBP1L1	Q9HC44	474 aa	Predicted RBP	13.79	□□□□□ -0.2
PRKD1-208	ENST00000551644	ATP10D	Q9P241	1426 aa		13.79	□□□□□ -0.2
PRKD1-208	ENST00000551644	MEGF6	O75095	1541 aa		13.79	□□□□□ -0.2
PRKD1-208	ENST00000551644	RRS1	Q15050	365 aa	Known RBP	13.78	□□□□□ -0.2
PRKD1-208	ENST00000551644	COL23A1	Q86Y22	540 aa	Predicted RBP	13.78	□□□□□ -0.2
PRKD1-208	ENST00000551644	RAPGEF4	Q8WZA2	1011 aa		13.78	□□□□□ -0.2
PRKD1-208	ENST00000551644	INSR	P06213	1382 aa		13.77	□□□□□ -0.21
PRKD1-208	ENST00000551644	GOLGB1	Q14789	3259 aa	Known RBP	13.77	□□□□□ -0.21
PRKD1-208	ENST00000551644	C5	P01031	1676 aa		13.76	□□□□□ -0.21
PRKD1-208	ENST00000551644	WASHC2A	Q641Q2	1341 aa		13.76	□□□□□ -0.21
PRKD1-208	ENST00000551644	PCDH11X	Q9BZA7	1347 aa		13.76	□□□□□ -0.21
PRKD1-208	ENST00000551644	PCDH11Y	Q9BZA8	1340 aa		13.76	□□□□□ -0.21
PRKD1-208	ENST00000551644	AMER1	Q5JTC6	1135 aa	Predicted RBP	13.76	□□□□□ -0.21
PRKD1-208	ENST00000551644	POLK	Q9UBT6	870 aa		13.76	□□□□□ -0.21
PRKD1-208	ENST00000551644	HSP90AB2P	Q58FF8	381 aa		13.75	□□□□□ -0.21
PRKD1-208	ENST00000551644	MSL1	Q68DK7	614 aa		13.75	□□□□□ -0.21
PRKD1-208	ENST00000551644	POLR3GL	Q9BT43	218 aa		13.75	□□□□□ -0.21
PRKD1-208	ENST00000551644	MAP2	P11137	1827 aa	Known RBP	13.75	□□□□□ -0.21
PRKD1-208	ENST00000551644	ADCY9	O60503	1353 aa		13.74	□□□□□ -0.21
PRKD1-208	ENST00000551644	PALLD	Q8WX93	1383 aa		13.74	□□□□□ -0.21
PRKD1-208	ENST00000551644	HSPA6	P17066	643 aa		13.74	□□□□□ -0.21
PRKD1-208	ENST00000551644	TAT	P17735	454 aa	Predicted RBP	13.74	□□□□□ -0.21
PRKD1-208	ENST00000551644	NBPF6	Q5VWK0	638 aa		13.74	□□□□□ -0.21
PRKD1-208	ENST00000551644	SMARCC1	Q92922	1105 aa	Predicted RBP	13.74	□□□□□ -0.21
PRKD1-208	ENST00000551644	NBPF4	Q96M43	638 aa		13.74	□□□□□ -0.21
PRKD1-208	ENST00000551644	CEP350	Q5VT06	3117 aa		13.74	□□□□□ -0.21
PRKD1-208	ENST00000551644	ANKRD26	Q9UPS8	1709 aa		13.73	□□□□□ -0.21
PRKD1-208	ENST00000551644	FLT4	P35916	1363 aa		13.73	□□□□□ -0.21
PRKD1-208	ENST00000551644	AK7	Q96M32	723 aa		13.73	□□□□□ -0.21
PRKD1-208	ENST00000551644	EMILIN1	Q9Y6C2	1016 aa		13.73	□□□□□ -0.21
PRKD1-208	ENST00000551644	RGPD2	P0DJD1	1756 aa		13.71	□□□□□ -0.21
PRKD1-208	ENST00000551644	C4B	P0C0L5	1744 aa		13.71	□□□□□ -0.21
PRKD1-208	ENST00000551644	KNSTRN	Q9Y448	316 aa		13.71	□□□□□ -0.21
PRKD1-208	ENST00000551644	NCAPD2	Q15021	1401 aa		13.71	□□□□□ -0.22
PRKD1-208	ENST00000551644	NPC1L1	Q9UHC9	1359 aa		13.7	□□□□□ -0.22
PRKD1-208	ENST00000551644	IGSF1	Q8N6C5	1336 aa		13.69	□□□□□ -0.22
PRKD1-208	ENST00000551644	SSFA2	P28290	1259 aa		13.69	□□□□□ -0.22
PRKD1-208	ENST00000551644	MPRIP	Q6WCQ1	1025 aa		13.69	□□□□□ -0.22
PRKD1-208	ENST00000551644	USHBP1	Q8N6Y0	703 aa		13.69	□□□□□ -0.22
PRKD1-208	ENST00000551644	TAF1L	Q8IZX4	1826 aa		13.69	□□□□□ -0.22
PRKD1-208	ENST00000551644	ZNF526	Q8TF50	670 aa	Predicted RBP	13.68	□□□□□ -0.22
PRKD1-208	ENST00000551644	MORC1	Q86VD1	984 aa		13.67	□□□□□ -0.22
PRKD1-208	ENST00000551644	CIC	Q96RK0	1608 aa	Predicted RBP	13.66	□□□□□ -0.22
PRKD1-208	ENST00000551644	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	13.66	□□□□□ -0.22
PRKD1-208	ENST00000551644	PHF14	O94880	888 aa		13.66	□□□□□ -0.22
PRKD1-208	ENST00000551644	EYA1	Q99502	592 aa		13.66	□□□□□ -0.22
PRKD1-208	ENST00000551644	PKD1L3	Q7Z443	1732 aa		13.65	□□□□□ -0.22
PRKD1-208	ENST00000551644	CYP27B1	O15528	508 aa		13.65	□□□□□ -0.22
PRKD1-208	ENST00000551644	EIF4A2	Q14240	407 aa	Known RBP	13.65	□□□□□ -0.22
PRKD1-208	ENST00000551644	SPG7	Q9UQ90	795 aa		13.65	□□□□□ -0.22
PRKD1-208	ENST00000551644	TOGARAM1	Q9Y4F4	1720 aa		13.64	□□□□□ -0.23
PRKD1-208	ENST00000551644	UBR3	Q6ZT12	1888 aa		13.64	□□□□□ -0.23
PRKD1-208	ENST00000551644	TNNT2	P45379	298 aa	Predicted RBP	13.64	□□□□□ -0.23
PRKD1-208	ENST00000551644	APLP1	P51693	650 aa		13.64	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 29 ms