RNA–Protein interactions for RNA: ENST00000551642.1

DEPDC4-210, Transcript of DEP domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene DEPDC4, Length 1,033 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-210ENST00000551642 SMCPP49901 116 aaPredicted RBP11.08□□□□□ -0.64
DEPDC4-210ENST00000551642 CTC1Q2NKJ3 1217 aa11.08□□□□□ -0.64
DEPDC4-210ENST00000551642 HELBQ8NG08 1087 aaPredicted RBP11.08□□□□□ -0.64
DEPDC4-210ENST00000551642 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.08□□□□□ -0.64
DEPDC4-210ENST00000551642 SMPD1P17405 629 aa11.07□□□□□ -0.64
DEPDC4-210ENST00000551642 BAP1Q92560 729 aa11.07□□□□□ -0.64
DEPDC4-210ENST00000551642 AAASQ9NRG9 546 aa11.07□□□□□ -0.64
DEPDC4-210ENST00000551642 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.06□□□□□ -0.64
DEPDC4-210ENST00000551642 PER1O15534 1290 aaPredicted RBP11.06□□□□□ -0.64
DEPDC4-210ENST00000551642 CTHP32929 405 aa11.06□□□□□ -0.64
DEPDC4-210ENST00000551642 PPP2R2DQ66LE6 453 aa11.06□□□□□ -0.64
DEPDC4-210ENST00000551642 ZNF511Q8NB15 262 aa11.06□□□□□ -0.64
DEPDC4-210ENST00000551642 EHBP1Q8NDI1 1231 aa11.06□□□□□ -0.64
DEPDC4-210ENST00000551642 GOLGA3Q08378 1498 aa11.06□□□□□ -0.64
DEPDC4-210ENST00000551642 PLA2R1Q13018 1463 aa11.06□□□□□ -0.64
DEPDC4-210ENST00000551642 RAPGEF2Q9Y4G8 1499 aa11.06□□□□□ -0.64
DEPDC4-210ENST00000551642 CPS1P31327 1500 aa11.05□□□□□ -0.64
DEPDC4-210ENST00000551642 GOPCQ9HD26 462 aa11.05□□□□□ -0.64
DEPDC4-210ENST00000551642 MYO3AQ8NEV4 1616 aa11.05□□□□□ -0.64
DEPDC4-210ENST00000551642 MPNDQ8N594 471 aa11.04□□□□□ -0.64
DEPDC4-210ENST00000551642 MAP10Q9P2G4 905 aa11.04□□□□□ -0.64
DEPDC4-210ENST00000551642 DIP2CQ9Y2E4 1556 aa11.03□□□□□ -0.64
DEPDC4-210ENST00000551642 STRCP1A6NGW2 1772 aa11.03□□□□□ -0.64
DEPDC4-210ENST00000551642 J3QL48 77 aa11.03□□□□□ -0.64
DEPDC4-210ENST00000551642 VARSP26640 1264 aaKnown RBP11.03□□□□□ -0.64
DEPDC4-210ENST00000551642 TSC1Q92574 1164 aa11.03□□□□□ -0.64
DEPDC4-210ENST00000551642 POLR1AO95602 1720 aaPredicted RBP11.03□□□□□ -0.64
DEPDC4-210ENST00000551642 SCAPERQ9BY12 1400 aa11.02□□□□□ -0.64
DEPDC4-210ENST00000551642 SHANK2Q9UPX8 1470 aa11.02□□□□□ -0.65
DEPDC4-210ENST00000551642 LINC01559Q495D7 138 aa11.02□□□□□ -0.65
DEPDC4-210ENST00000551642 ZNF787Q6DD87 383 aa11.02□□□□□ -0.65
DEPDC4-210ENST00000551642 PROCA1Q8NCQ7 364 aaPredicted RBP11.02□□□□□ -0.65
DEPDC4-210ENST00000551642 NEURL4Q96JN8 1562 aa11.02□□□□□ -0.65
DEPDC4-210ENST00000551642 REREQ9P2R6 1566 aa11.02□□□□□ -0.65
DEPDC4-210ENST00000551642 RAPGEF6Q8TEU7 1601 aa11.02□□□□□ -0.65
DEPDC4-210ENST00000551642 MROH2AA6NES4 1674 aa11.01□□□□□ -0.65
DEPDC4-210ENST00000551642 PTPRKQ15262 1439 aa11.01□□□□□ -0.65
DEPDC4-210ENST00000551642 AXIN1O15169 862 aa11.01□□□□□ -0.65
DEPDC4-210ENST00000551642 ARMC2Q8NEN0 867 aa11.01□□□□□ -0.65
DEPDC4-210ENST00000551642 VWDEQ8N2E2 1590 aa11.01□□□□□ -0.65
DEPDC4-210ENST00000551642 ABCA6Q8N139 1617 aa11.01□□□□□ -0.65
DEPDC4-210ENST00000551642 CEP170BQ9Y4F5 1589 aaPredicted RBP11□□□□□ -0.65
DEPDC4-210ENST00000551642 ST8SIA5O15466 376 aa11□□□□□ -0.65
DEPDC4-210ENST00000551642 NEUROD2Q15784 382 aa11□□□□□ -0.65
DEPDC4-210ENST00000551642 AGLP35573 1532 aa10.99□□□□□ -0.65
DEPDC4-210ENST00000551642 ALDH1A1P00352 501 aa10.99□□□□□ -0.65
DEPDC4-210ENST00000551642 NPATQ14207 1427 aa10.99□□□□□ -0.65
DEPDC4-210ENST00000551642 CTDSPL2Q05D32 466 aa10.98□□□□□ -0.65
DEPDC4-210ENST00000551642 FBXO31Q5XUX0 539 aaPredicted RBP10.98□□□□□ -0.65
DEPDC4-210ENST00000551642 KDM5CP41229 1560 aa10.98□□□□□ -0.65
DEPDC4-210ENST00000551642 BRPF1P55201 1214 aaPredicted RBP10.97□□□□□ -0.65
DEPDC4-210ENST00000551642 TPRNQ4KMQ1 711 aa10.97□□□□□ -0.65
DEPDC4-210ENST00000551642 HPS1Q92902 700 aa10.97□□□□□ -0.65
DEPDC4-210ENST00000551642 NUP153P49790 1475 aaKnown RBP10.97□□□□□ -0.65
DEPDC4-210ENST00000551642 RNF17Q9BXT8 1623 aaKnown RBP10.96□□□□□ -0.65
DEPDC4-210ENST00000551642 GPKOWQ92917 476 aaPredicted RBP eCLIP10.96□□□□□ -0.65
DEPDC4-210ENST00000551642 NBPF14Q5TI25 921 aa10.95□□□□□ -0.66
DEPDC4-210ENST00000551642 BPHLQ86WA6 291 aaPredicted RBP10.95□□□□□ -0.66
DEPDC4-210ENST00000551642 FAM174AQ8TBP5 190 aa10.95□□□□□ -0.66
DEPDC4-210ENST00000551642 XIRP1Q702N8 1843 aaKnown RBP10.95□□□□□ -0.66
DEPDC4-210ENST00000551642 DNMT1P26358 1616 aaKnown RBP10.95□□□□□ -0.66
DEPDC4-210ENST00000551642 FOXJ1Q92949 421 aa10.94□□□□□ -0.66
DEPDC4-210ENST00000551642 CDK15Q96Q40 435 aa10.94□□□□□ -0.66
DEPDC4-210ENST00000551642 WASF2Q9Y6W5 498 aa10.94□□□□□ -0.66
DEPDC4-210ENST00000551642 CLTCQ00610 1675 aaKnown RBP10.93□□□□□ -0.66
DEPDC4-210ENST00000551642 SH3RF1Q7Z6J0 888 aa10.93□□□□□ -0.66
DEPDC4-210ENST00000551642 DACH1Q9UI36 760 aa10.93□□□□□ -0.66
DEPDC4-210ENST00000551642 CNTLNQ9NXG0 1405 aa10.92□□□□□ -0.66
DEPDC4-210ENST00000551642 POTECB2RU33 542 aa10.92□□□□□ -0.66
DEPDC4-210ENST00000551642 PCMTD1Q96MG8 357 aaPredicted RBP10.92□□□□□ -0.66
DEPDC4-210ENST00000551642 ATP1B4Q9UN42 357 aaPredicted RBP10.92□□□□□ -0.66
DEPDC4-210ENST00000551642 ZMYM3Q14202 1370 aa10.91□□□□□ -0.66
DEPDC4-210ENST00000551642 LRRC7Q96NW7 1537 aa10.91□□□□□ -0.66
DEPDC4-210ENST00000551642 C4orf48Q5BLP8 95 aa10.91□□□□□ -0.66
DEPDC4-210ENST00000551642 SH3BP5LQ7L8J4 393 aa10.91□□□□□ -0.66
DEPDC4-210ENST00000551642 IL27Q8NEV9 243 aa10.91□□□□□ -0.66
DEPDC4-210ENST00000551642 LRRN4Q8WUT4 740 aa10.91□□□□□ -0.66
DEPDC4-210ENST00000551642 TLL2Q9Y6L7 1015 aa10.91□□□□□ -0.66
DEPDC4-210ENST00000551642 MYO5CQ9NQX4 1742 aa10.91□□□□□ -0.66
DEPDC4-210ENST00000551642 PLCH2O75038 1416 aa10.91□□□□□ -0.66
DEPDC4-210ENST00000551642 RFC5P40937 340 aa10.9□□□□□ -0.66
DEPDC4-210ENST00000551642 AFAP1Q8N556 730 aa10.9□□□□□ -0.66
DEPDC4-210ENST00000551642 C1QTNF2Q9BXJ5 285 aa10.9□□□□□ -0.66
DEPDC4-210ENST00000551642 SAMD9Q5K651 1589 aa10.9□□□□□ -0.67
DEPDC4-210ENST00000551642 ZC3H4Q9UPT8 1303 aaKnown RBP10.89□□□□□ -0.67
DEPDC4-210ENST00000551642 ZNF518AQ6AHZ1 1483 aa10.89□□□□□ -0.67
DEPDC4-210ENST00000551642 ATP13A2Q9NQ11 1180 aa10.89□□□□□ -0.67
DEPDC4-210ENST00000551642 KIDINS220Q9ULH0 1771 aa10.88□□□□□ -0.67
DEPDC4-210ENST00000551642 AP1G2O75843 785 aa10.88□□□□□ -0.67
DEPDC4-210ENST00000551642 ADH1CP00326 375 aa10.88□□□□□ -0.67
DEPDC4-210ENST00000551642 AGERQ15109 404 aa10.88□□□□□ -0.67
DEPDC4-210ENST00000551642 PDXDC2PQ6P474 469 aa10.88□□□□□ -0.67
DEPDC4-210ENST00000551642 TRMT44Q8IYL2 757 aaKnown RBP10.88□□□□□ -0.67
DEPDC4-210ENST00000551642 ESF1Q9H501 851 aaKnown RBP10.88□□□□□ -0.67
DEPDC4-210ENST00000551642 SETBP1Q9Y6X0 1596 aa10.88□□□□□ -0.67
DEPDC4-210ENST00000551642 SYNMO15061 1565 aa10.87□□□□□ -0.67
DEPDC4-210ENST00000551642 TMEM259Q4ZIN3 620 aa10.87□□□□□ -0.67
DEPDC4-210ENST00000551642 GMPR2Q9P2T1 348 aaKnown RBP10.87□□□□□ -0.67
DEPDC4-210ENST00000551642 FKBPLQ9UIM3 349 aa10.87□□□□□ -0.67
DEPDC4-210ENST00000551642 PLEKHD1A6NEE1 506 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms