RNA–Protein interactions for RNA: ENST00000551223.5

PFDN5-215, Transcript of prefoldin subunit 5, humanhuman

TSL 4

Gene PFDN5, Length 478 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-215ENST00000551223 COL3A1P02461 1466 aaPredicted RBP12.78□□□□□ -0.36
PFDN5-215ENST00000551223 SF3B2Q13435 895 aaKnown RBP12.78□□□□□ -0.36
PFDN5-215ENST00000551223 RALBP1Q15311 655 aa12.78□□□□□ -0.36
PFDN5-215ENST00000551223 SULT6B1Q6IMI4 303 aa12.78□□□□□ -0.36
PFDN5-215ENST00000551223 CFAP53Q96M91 514 aa12.78□□□□□ -0.36
PFDN5-215ENST00000551223 RGPD1P0DJD0 1748 aa12.77□□□□□ -0.36
PFDN5-215ENST00000551223 PTF1AQ7RTS3 328 aa12.77□□□□□ -0.37
PFDN5-215ENST00000551223 DEFB132Q7Z7B7 95 aa12.77□□□□□ -0.37
PFDN5-215ENST00000551223 KAT6BQ8WYB5 2073 aa12.77□□□□□ -0.37
PFDN5-215ENST00000551223 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.76□□□□□ -0.37
PFDN5-215ENST00000551223 SPG7Q9UQ90 795 aa12.76□□□□□ -0.37
PFDN5-215ENST00000551223 KDRP35968 1356 aa12.76□□□□□ -0.37
PFDN5-215ENST00000551223 SHANK3Q9BYB0 1731 aa12.76□□□□□ -0.37
PFDN5-215ENST00000551223 U2SURPO15042 1029 aaKnown RBP12.75□□□□□ -0.37
PFDN5-215ENST00000551223 CYP27B1O15528 508 aa12.75□□□□□ -0.37
PFDN5-215ENST00000551223 KCNQ2O43526 872 aa12.75□□□□□ -0.37
PFDN5-215ENST00000551223 APBA3O96018 575 aa12.75□□□□□ -0.37
PFDN5-215ENST00000551223 HMOX1P09601 288 aa12.75□□□□□ -0.37
PFDN5-215ENST00000551223 SBF2Q86WG5 1849 aa12.75□□□□□ -0.37
PFDN5-215ENST00000551223 ACSBG1Q96GR2 724 aa12.75□□□□□ -0.37
PFDN5-215ENST00000551223 PCDH11XQ9BZA7 1347 aa12.75□□□□□ -0.37
PFDN5-215ENST00000551223 PCDH11YQ9BZA8 1340 aa12.75□□□□□ -0.37
PFDN5-215ENST00000551223 BCL11BQ9C0K0 894 aaPredicted RBP12.75□□□□□ -0.37
PFDN5-215ENST00000551223 PLEKHG2Q9H7P9 1386 aa12.74□□□□□ -0.37
PFDN5-215ENST00000551223 BAG6P46379 1132 aa12.74□□□□□ -0.37
PFDN5-215ENST00000551223 PRKRIP1Q9H875 184 aaPredicted RBP12.74□□□□□ -0.37
PFDN5-215ENST00000551223 PKD1L3Q7Z443 1732 aa12.74□□□□□ -0.37
PFDN5-215ENST00000551223 TNS1Q9HBL0 1735 aaKnown RBP12.74□□□□□ -0.37
PFDN5-215ENST00000551223 EN1Q05925 392 aaPredicted RBP12.73□□□□□ -0.37
PFDN5-215ENST00000551223 PLEKHO1Q53GL0 409 aaPredicted RBP12.73□□□□□ -0.37
PFDN5-215ENST00000551223 NUDCQ9Y266 331 aa12.73□□□□□ -0.37
PFDN5-215ENST00000551223 MYBBP1AQ9BQG0 1328 aaKnown RBP12.72□□□□□ -0.37
PFDN5-215ENST00000551223 PRIM1P49642 420 aaKnown RBP12.72□□□□□ -0.37
PFDN5-215ENST00000551223 AMOTQ4VCS5 1084 aa12.72□□□□□ -0.37
PFDN5-215ENST00000551223 U2AF1L5P0DN76 240 aaPredicted RBP12.71□□□□□ -0.37
PFDN5-215ENST00000551223 PHKG2P15735 406 aa12.71□□□□□ -0.37
PFDN5-215ENST00000551223 U2AF1Q01081 240 aaKnown RBP eCLIP12.71□□□□□ -0.37
PFDN5-215ENST00000551223 NKX1-1Q15270 411 aaPredicted RBP12.71□□□□□ -0.37
PFDN5-215ENST00000551223 IFNL2Q8IZJ0 200 aa12.71□□□□□ -0.37
PFDN5-215ENST00000551223 CAMKK2Q96RR4 588 aa12.71□□□□□ -0.37
PFDN5-215ENST00000551223 EZH2Q15910 746 aaKnown RBP12.7□□□□□ -0.38
PFDN5-215ENST00000551223 ZNF530Q6P9A1 599 aaPredicted RBP12.7□□□□□ -0.38
PFDN5-215ENST00000551223 SYTL4Q96C24 671 aaPredicted RBP12.7□□□□□ -0.38
PFDN5-215ENST00000551223 NHSQ6T4R5 1651 aa12.7□□□□□ -0.38
PFDN5-215ENST00000551223 PLSCR1O15162 318 aa12.69□□□□□ -0.38
PFDN5-215ENST00000551223 RSPH6AQ9H0K4 717 aa12.69□□□□□ -0.38
PFDN5-215ENST00000551223 DOT1LQ8TEK3 1739 aa12.68□□□□□ -0.38
PFDN5-215ENST00000551223 PRKAR2BP31323 418 aa12.68□□□□□ -0.38
PFDN5-215ENST00000551223 MTHFSDQ2M296 383 aaKnown RBP12.68□□□□□ -0.38
PFDN5-215ENST00000551223 FCHSD2O94868 740 aa12.67□□□□□ -0.38
PFDN5-215ENST00000551223 HSP90AB1P08238 724 aaKnown RBP12.67□□□□□ -0.38
PFDN5-215ENST00000551223 C1orf141Q5JVX7 400 aa12.67□□□□□ -0.38
PFDN5-215ENST00000551223 PHACTR3Q96KR7 559 aa12.67□□□□□ -0.38
PFDN5-215ENST00000551223 BTAF1O14981 1849 aa12.67□□□□□ -0.38
PFDN5-215ENST00000551223 MPRIPQ6WCQ1 1025 aa12.66□□□□□ -0.38
PFDN5-215ENST00000551223 PROM2Q8N271 834 aa12.66□□□□□ -0.38
PFDN5-215ENST00000551223 DCAF5Q96JK2 942 aa12.66□□□□□ -0.38
PFDN5-215ENST00000551223 TOGARAM1Q9Y4F4 1720 aa12.65□□□□□ -0.38
PFDN5-215ENST00000551223 ANP32CO43423 234 aa12.65□□□□□ -0.38
PFDN5-215ENST00000551223 AKAP4Q5JQC9 854 aa12.65□□□□□ -0.38
PFDN5-215ENST00000551223 PIGBQ92521 554 aa12.65□□□□□ -0.38
PFDN5-215ENST00000551223 KDM6AO15550 1401 aaPredicted RBP12.64□□□□□ -0.39
PFDN5-215ENST00000551223 ERVV-2B6SEH9 535 aa12.64□□□□□ -0.39
PFDN5-215ENST00000551223 TXNRD1Q16881 649 aa12.64□□□□□ -0.39
PFDN5-215ENST00000551223 GAS2L2Q8NHY3 880 aa12.64□□□□□ -0.39
PFDN5-215ENST00000551223 ITGB4P16144 1822 aa12.64□□□□□ -0.39
PFDN5-215ENST00000551223 RGPD3A6NKT7 1758 aaPredicted RBP12.64□□□□□ -0.39
PFDN5-215ENST00000551223 RGPD4Q7Z3J3 1758 aa12.64□□□□□ -0.39
PFDN5-215ENST00000551223 LGR6Q9HBX8 967 aa12.63□□□□□ -0.39
PFDN5-215ENST00000551223 TMOD3Q9NYL9 352 aa12.63□□□□□ -0.39
PFDN5-215ENST00000551223 RREB1Q92766 1687 aa12.62□□□□□ -0.39
PFDN5-215ENST00000551223 CABP4P57796 275 aa12.62□□□□□ -0.39
PFDN5-215ENST00000551223 CCDC184Q52MB2 194 aa12.62□□□□□ -0.39
PFDN5-215ENST00000551223 PLEKHF1Q96S99 279 aa12.62□□□□□ -0.39
PFDN5-215ENST00000551223 GNAT3A8MTJ3 354 aa12.61□□□□□ -0.39
PFDN5-215ENST00000551223 RNMTO43148 476 aaKnown RBP12.61□□□□□ -0.39
PFDN5-215ENST00000551223 NFATC2IPQ8NCF5 419 aa12.61□□□□□ -0.39
PFDN5-215ENST00000551223 LRRC4BQ9NT99 713 aa12.61□□□□□ -0.39
PFDN5-215ENST00000551223 NUP188Q5SRE5 1749 aa12.6□□□□□ -0.39
PFDN5-215ENST00000551223 MAP3K5Q99683 1374 aa12.6□□□□□ -0.39
PFDN5-215ENST00000551223 WDR43Q15061 677 aaKnown RBP eCLIP12.6□□□□□ -0.39
PFDN5-215ENST00000551223 SLC27A3Q5K4L6 730 aa12.6□□□□□ -0.39
PFDN5-215ENST00000551223 IL17REQ8NFR9 667 aa12.6□□□□□ -0.39
PFDN5-215ENST00000551223 SMARCC1Q92922 1105 aaPredicted RBP12.6□□□□□ -0.39
PFDN5-215ENST00000551223 PNNQ9H307 717 aaKnown RBP12.6□□□□□ -0.39
PFDN5-215ENST00000551223 ATG3Q9NT62 314 aa12.6□□□□□ -0.39
PFDN5-215ENST00000551223 ASAP1Q9ULH1 1129 aa12.6□□□□□ -0.39
PFDN5-215ENST00000551223 SCN11AQ9UI33 1791 aa12.6□□□□□ -0.39
PFDN5-215ENST00000551223 PALLDQ8WX93 1383 aa12.59□□□□□ -0.39
PFDN5-215ENST00000551223 NEFMP07197 916 aa12.59□□□□□ -0.39
PFDN5-215ENST00000551223 KCNQ4P56696 695 aa12.59□□□□□ -0.39
PFDN5-215ENST00000551223 NBPF14Q5TI25 921 aa12.59□□□□□ -0.39
PFDN5-215ENST00000551223 SLC52A2Q9HAB3 445 aa12.59□□□□□ -0.39
PFDN5-215ENST00000551223 ADAMTS8Q9UP79 889 aa12.59□□□□□ -0.39
PFDN5-215ENST00000551223 PSDA5PKW4 1024 aaPredicted RBP12.58□□□□□ -0.4
PFDN5-215ENST00000551223 LY75O60449 1722 aa12.58□□□□□ -0.4
PFDN5-215ENST00000551223 R3HDM1Q15032 1099 aaKnown RBP12.58□□□□□ -0.4
PFDN5-215ENST00000551223 ANO8Q9HCE9 1232 aaPredicted RBP12.58□□□□□ -0.4
PFDN5-215ENST00000551223 CCNL1Q9UK58 526 aaPredicted RBP12.58□□□□□ -0.4
PFDN5-215ENST00000551223 ADAMTS7Q9UKP4 1686 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms