RNA–Protein interactions for RNA: ENST00000551063.5

PRPF40B-211, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 4

Gene PRPF40B, Length 531 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-211ENST00000551063 NBPF14Q5TI25 921 aa20.95■□□□□ 0.94
PRPF40B-211ENST00000551063 EYA1Q99502 592 aa20.95■□□□□ 0.94
PRPF40B-211ENST00000551063 ZCRB1Q8TBF4 217 aaKnown RBP20.94■□□□□ 0.94
PRPF40B-211ENST00000551063 BCL11BQ9C0K0 894 aaPredicted RBP20.94■□□□□ 0.94
PRPF40B-211ENST00000551063 RGPD2P0DJD1 1756 aa20.94■□□□□ 0.94
PRPF40B-211ENST00000551063 PLEKHG2Q9H7P9 1386 aa20.94■□□□□ 0.94
PRPF40B-211ENST00000551063 IGSF1Q8N6C5 1336 aa20.92■□□□□ 0.94
PRPF40B-211ENST00000551063 PCDH11XQ9BZA7 1347 aa20.9■□□□□ 0.94
PRPF40B-211ENST00000551063 PCDH11YQ9BZA8 1340 aa20.9■□□□□ 0.94
PRPF40B-211ENST00000551063 DDX54Q8TDD1 881 aaKnown RBP20.9■□□□□ 0.94
PRPF40B-211ENST00000551063 PLSCR1O15162 318 aa20.89■□□□□ 0.93
PRPF40B-211ENST00000551063 MTHFSP49914 203 aa20.89■□□□□ 0.93
PRPF40B-211ENST00000551063 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.87■□□□□ 0.93
PRPF40B-211ENST00000551063 SBF2Q86WG5 1849 aa20.87■□□□□ 0.93
PRPF40B-211ENST00000551063 NHSQ6T4R5 1651 aa20.86■□□□□ 0.93
PRPF40B-211ENST00000551063 RREB1Q92766 1687 aa20.86■□□□□ 0.93
PRPF40B-211ENST00000551063 IL13P35225 146 aa20.86■□□□□ 0.93
PRPF40B-211ENST00000551063 PTF1AQ7RTS3 328 aa20.86■□□□□ 0.93
PRPF40B-211ENST00000551063 SHANK3Q9BYB0 1731 aa20.86■□□□□ 0.93
PRPF40B-211ENST00000551063 ACSBG1Q96GR2 724 aa20.85■□□□□ 0.93
PRPF40B-211ENST00000551063 SPG7Q9UQ90 795 aa20.85■□□□□ 0.93
PRPF40B-211ENST00000551063 PKD1L3Q7Z443 1732 aa20.84■□□□□ 0.93
PRPF40B-211ENST00000551063 KCNQ2O43526 872 aa20.84■□□□□ 0.93
PRPF40B-211ENST00000551063 CNGB1Q14028 1251 aaPredicted RBP20.84■□□□□ 0.93
PRPF40B-211ENST00000551063 RGPD3A6NKT7 1758 aaPredicted RBP20.84■□□□□ 0.93
PRPF40B-211ENST00000551063 RGPD4Q7Z3J3 1758 aa20.84■□□□□ 0.93
PRPF40B-211ENST00000551063 KDRP35968 1356 aa20.84■□□□□ 0.93
PRPF40B-211ENST00000551063 NUP188Q5SRE5 1749 aa20.82■□□□□ 0.92
PRPF40B-211ENST00000551063 CYP27B1O15528 508 aa20.82■□□□□ 0.92
PRPF40B-211ENST00000551063 COL3A1P02461 1466 aaPredicted RBP20.81■□□□□ 0.92
PRPF40B-211ENST00000551063 DIAPH1O60610 1272 aaKnown RBP20.81■□□□□ 0.92
PRPF40B-211ENST00000551063 AEBP1Q8IUX7 1158 aa20.8■□□□□ 0.92
PRPF40B-211ENST00000551063 SULT6B1Q6IMI4 303 aa20.79■□□□□ 0.92
PRPF40B-211ENST00000551063 SPON1Q9HCB6 807 aa20.79■□□□□ 0.92
PRPF40B-211ENST00000551063 PPP2R1AP30153 589 aa20.78■□□□□ 0.92
PRPF40B-211ENST00000551063 NKX1-1Q15270 411 aaPredicted RBP20.78■□□□□ 0.92
PRPF40B-211ENST00000551063 AMOTQ4VCS5 1084 aa20.78■□□□□ 0.92
PRPF40B-211ENST00000551063 CFAP53Q96M91 514 aa20.78■□□□□ 0.92
PRPF40B-211ENST00000551063 PHKG2P15735 406 aa20.77■□□□□ 0.92
PRPF40B-211ENST00000551063 PRIM1P49642 420 aaKnown RBP20.77■□□□□ 0.92
PRPF40B-211ENST00000551063 PLEKHO1Q53GL0 409 aaPredicted RBP20.77■□□□□ 0.92
PRPF40B-211ENST00000551063 IFNL2Q8IZJ0 200 aa20.77■□□□□ 0.92
PRPF40B-211ENST00000551063 SYTL4Q96C24 671 aaPredicted RBP20.77■□□□□ 0.92
PRPF40B-211ENST00000551063 DOT1LQ8TEK3 1739 aa20.76■□□□□ 0.91
PRPF40B-211ENST00000551063 DDX10Q13206 875 aaKnown RBP20.76■□□□□ 0.91
PRPF40B-211ENST00000551063 TXNRD1Q16881 649 aa20.75■□□□□ 0.91
PRPF40B-211ENST00000551063 PROM2Q8N271 834 aa20.75■□□□□ 0.91
PRPF40B-211ENST00000551063 BTAF1O14981 1849 aa20.74■□□□□ 0.91
PRPF40B-211ENST00000551063 PPP1R1BQ9UD71 204 aaPredicted RBP20.73■□□□□ 0.91
PRPF40B-211ENST00000551063 HSP90AB1P08238 724 aaKnown RBP20.72■□□□□ 0.91
PRPF40B-211ENST00000551063 ZNF530Q6P9A1 599 aaPredicted RBP20.72■□□□□ 0.91
PRPF40B-211ENST00000551063 HMOX1P09601 288 aa20.71■□□□□ 0.91
PRPF40B-211ENST00000551063 RALBP1Q15311 655 aa20.71■□□□□ 0.91
PRPF40B-211ENST00000551063 ANO8Q9HCE9 1232 aaPredicted RBP20.71■□□□□ 0.91
PRPF40B-211ENST00000551063 STK32BQ9NY57 414 aa20.71■□□□□ 0.91
PRPF40B-211ENST00000551063 U2SURPO15042 1029 aaKnown RBP20.7■□□□□ 0.9
PRPF40B-211ENST00000551063 SLC27A3Q5K4L6 730 aa20.7■□□□□ 0.9
PRPF40B-211ENST00000551063 NUDCQ9Y266 331 aa20.7■□□□□ 0.9
PRPF40B-211ENST00000551063 DCAF5Q96JK2 942 aa20.69■□□□□ 0.9
PRPF40B-211ENST00000551063 TOGARAM1Q9Y4F4 1720 aa20.69■□□□□ 0.9
PRPF40B-211ENST00000551063 C1orf141Q5JVX7 400 aa20.68■□□□□ 0.9
PRPF40B-211ENST00000551063 MPRIPQ6WCQ1 1025 aa20.68■□□□□ 0.9
PRPF40B-211ENST00000551063 KAT6BQ8WYB5 2073 aa20.68■□□□□ 0.9
PRPF40B-211ENST00000551063 SLC15A2Q16348 729 aa20.67■□□□□ 0.9
PRPF40B-211ENST00000551063 DCAF8L1A6NGE4 600 aa20.66■□□□□ 0.9
PRPF40B-211ENST00000551063 ERVV-2B6SEH9 535 aa20.66■□□□□ 0.9
PRPF40B-211ENST00000551063 SMARCC1Q92922 1105 aaPredicted RBP20.66■□□□□ 0.9
PRPF40B-211ENST00000551063 TMOD3Q9NYL9 352 aa20.66■□□□□ 0.9
PRPF40B-211ENST00000551063 KDM6AO15550 1401 aaPredicted RBP20.66■□□□□ 0.9
PRPF40B-211ENST00000551063 PAPPAQ13219 1627 aa20.65■□□□□ 0.9
PRPF40B-211ENST00000551063 PALLDQ8WX93 1383 aa20.65■□□□□ 0.9
PRPF40B-211ENST00000551063 AKAP4Q5JQC9 854 aa20.65■□□□□ 0.9
PRPF40B-211ENST00000551063 PIGBQ92521 554 aa20.65■□□□□ 0.9
PRPF40B-211ENST00000551063 LRRC4BQ9NT99 713 aa20.64■□□□□ 0.89
PRPF40B-211ENST00000551063 ZNF316A6NFI3 1004 aaPredicted RBP20.63■□□□□ 0.89
PRPF40B-211ENST00000551063 CCNL1Q9UK58 526 aaPredicted RBP20.63■□□□□ 0.89
PRPF40B-211ENST00000551063 MYBBP1AQ9BQG0 1328 aaKnown RBP20.62■□□□□ 0.89
PRPF40B-211ENST00000551063 ZBTB7AO95365 584 aa20.62■□□□□ 0.89
PRPF40B-211ENST00000551063 U2AF1L5P0DN76 240 aaPredicted RBP20.62■□□□□ 0.89
PRPF40B-211ENST00000551063 HMGB2P26583 209 aaKnown RBP20.62■□□□□ 0.89
PRPF40B-211ENST00000551063 U2AF1Q01081 240 aaKnown RBP eCLIP20.62■□□□□ 0.89
PRPF40B-211ENST00000551063 MTHFSDQ2M296 383 aaKnown RBP20.62■□□□□ 0.89
PRPF40B-211ENST00000551063 GAS2L2Q8NHY3 880 aa20.62■□□□□ 0.89
PRPF40B-211ENST00000551063 PDGFDQ9GZP0 370 aaPredicted RBP20.62■□□□□ 0.89
PRPF40B-211ENST00000551063 RSPH6AQ9H0K4 717 aa20.62■□□□□ 0.89
PRPF40B-211ENST00000551063 LY75O60449 1722 aa20.61■□□□□ 0.89
PRPF40B-211ENST00000551063 FCHSD2O94868 740 aa20.6■□□□□ 0.89
PRPF40B-211ENST00000551063 PRKAR2BP31323 418 aa20.6■□□□□ 0.89
PRPF40B-211ENST00000551063 ITGB4P16144 1822 aa20.6■□□□□ 0.89
PRPF40B-211ENST00000551063 CASZ1Q86V15 1759 aa20.59■□□□□ 0.89
PRPF40B-211ENST00000551063 CABP4P57796 275 aa20.59■□□□□ 0.89
PRPF40B-211ENST00000551063 MTFR1LQ9H019 292 aa20.59■□□□□ 0.89
PRPF40B-211ENST00000551063 ATF5Q9Y2D1 282 aaPredicted RBP20.59■□□□□ 0.89
PRPF40B-211ENST00000551063 AKT1S1Q96B36 256 aa20.58■□□□□ 0.89
PRPF40B-211ENST00000551063 MRC1P22897 1456 aa20.57■□□□□ 0.88
PRPF40B-211ENST00000551063 PTGER2P43116 358 aa20.57■□□□□ 0.88
PRPF40B-211ENST00000551063 ZNF827Q17R98 1081 aa20.57■□□□□ 0.88
PRPF40B-211ENST00000551063 PRKRIP1Q9H875 184 aaPredicted RBP20.57■□□□□ 0.88
PRPF40B-211ENST00000551063 ATG3Q9NT62 314 aa20.56■□□□□ 0.88
PRPF40B-211ENST00000551063 ASAP1Q9ULH1 1129 aa20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms