RNA–Protein interactions for RNA: ENST00000550974.1

GPN3-208, Transcript of GPN-loop GTPase 3, humanhuman

TSL 5

Gene GPN3, Length 564 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-208ENST00000550974 SRPK2P78362 688 aaKnown RBP16.7■□□□□ 0.26
GPN3-208ENST00000550974 ARHGAP27Q6ZUM4 889 aa16.7■□□□□ 0.26
GPN3-208ENST00000550974 SMC1BQ8NDV3 1235 aa16.69■□□□□ 0.26
GPN3-208ENST00000550974 RRAGCQ9HB90 399 aa16.68■□□□□ 0.26
GPN3-208ENST00000550974 BCS1LQ9Y276 419 aa16.68■□□□□ 0.26
GPN3-208ENST00000550974 PIK3C2AO00443 1686 aa16.68■□□□□ 0.26
GPN3-208ENST00000550974 FLAD1Q8NFF5 587 aa16.67■□□□□ 0.26
GPN3-208ENST00000550974 CABP2Q9NPB3 220 aa16.66■□□□□ 0.26
GPN3-208ENST00000550974 KDM2BQ8NHM5 1336 aa16.66■□□□□ 0.26
GPN3-208ENST00000550974 LY75O60449 1722 aa16.65■□□□□ 0.26
GPN3-208ENST00000550974 C9orf131Q5VYM1 1079 aa16.65■□□□□ 0.26
GPN3-208ENST00000550974 CABP1Q9NZU7 370 aa16.65■□□□□ 0.26
GPN3-208ENST00000550974 KCPQ6ZWJ8 1503 aa16.65■□□□□ 0.26
GPN3-208ENST00000550974 ANKRD36BQ8N2N9 1353 aa16.64■□□□□ 0.26
GPN3-208ENST00000550974 NSD2O96028 1365 aa16.64■□□□□ 0.25
GPN3-208ENST00000550974 SMIM5Q71RC9 77 aa16.63■□□□□ 0.25
GPN3-208ENST00000550974 DCAF11Q8TEB1 546 aa16.63■□□□□ 0.25
GPN3-208ENST00000550974 ERBB3P21860 1342 aa16.63■□□□□ 0.25
GPN3-208ENST00000550974 USP47Q96K76 1375 aa16.63■□□□□ 0.25
GPN3-208ENST00000550974 PLEKHG2Q9H7P9 1386 aa16.62■□□□□ 0.25
GPN3-208ENST00000550974 FOXN1O15353 648 aa16.61■□□□□ 0.25
GPN3-208ENST00000550974 MLLT1Q03111 559 aaPredicted RBP16.61■□□□□ 0.25
GPN3-208ENST00000550974 PRDM10Q9NQV6 1147 aa16.61■□□□□ 0.25
GPN3-208ENST00000550974 PHF14O94880 888 aa16.6■□□□□ 0.25
GPN3-208ENST00000550974 A0A0G2JLW4 131 aa16.59■□□□□ 0.25
GPN3-208ENST00000550974 FCHSD2O94868 740 aa16.59■□□□□ 0.25
GPN3-208ENST00000550974 ANKRD24Q8TF21 1146 aa16.59■□□□□ 0.25
GPN3-208ENST00000550974 C10orf71Q711Q0 1435 aa16.59■□□□□ 0.25
GPN3-208ENST00000550974 AMIGO3Q86WK7 504 aa16.58■□□□□ 0.24
GPN3-208ENST00000550974 ABHD8Q96I13 439 aa16.58■□□□□ 0.24
GPN3-208ENST00000550974 TTC21BQ7Z4L5 1316 aa16.58■□□□□ 0.24
GPN3-208ENST00000550974 PXDNLA1KZ92 1463 aa16.58■□□□□ 0.24
GPN3-208ENST00000550974 DOT1LQ8TEK3 1739 aa16.57■□□□□ 0.24
GPN3-208ENST00000550974 NFAT5O94916 1531 aa16.57■□□□□ 0.24
GPN3-208ENST00000550974 AK7Q96M32 723 aa16.57■□□□□ 0.24
GPN3-208ENST00000550974 TGFB2P61812 414 aa16.56■□□□□ 0.24
GPN3-208ENST00000550974 RNF181Q9P0P0 153 aa16.56■□□□□ 0.24
GPN3-208ENST00000550974 MKRN1Q9UHC7 482 aaKnown RBP16.56■□□□□ 0.24
GPN3-208ENST00000550974 C5P01031 1676 aa16.56■□□□□ 0.24
GPN3-208ENST00000550974 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.55■□□□□ 0.24
GPN3-208ENST00000550974 USP54Q70EL1 1684 aa16.55■□□□□ 0.24
GPN3-208ENST00000550974 HMGB2P26583 209 aaKnown RBP16.54■□□□□ 0.24
GPN3-208ENST00000550974 CTCFP49711 727 aaPredicted RBP16.54■□□□□ 0.24
GPN3-208ENST00000550974 QRICH2Q9H0J4 1663 aa16.53■□□□□ 0.24
GPN3-208ENST00000550974 AIDAQ96BJ3 306 aa16.53■□□□□ 0.24
GPN3-208ENST00000550974 N4BP2Q86UW6 1770 aaPredicted RBP16.52■□□□□ 0.24
GPN3-208ENST00000550974 CCDC85CA6NKD9 419 aa16.52■□□□□ 0.24
GPN3-208ENST00000550974 DPEP1P16444 411 aa16.52■□□□□ 0.24
GPN3-208ENST00000550974 TNRC6CQ9HCJ0 1690 aaKnown RBP16.52■□□□□ 0.23
GPN3-208ENST00000550974 TTC21AQ8NDW8 1320 aa16.51■□□□□ 0.23
GPN3-208ENST00000550974 MMP10P09238 476 aa16.51■□□□□ 0.23
GPN3-208ENST00000550974 LBX1P52954 281 aa16.51■□□□□ 0.23
GPN3-208ENST00000550974 PKD1L3Q7Z443 1732 aa16.5■□□□□ 0.23
GPN3-208ENST00000550974 VEGFAP15692 232 aaPredicted RBP16.5■□□□□ 0.23
GPN3-208ENST00000550974 ZNF692Q9BU19 519 aaPredicted RBP16.5■□□□□ 0.23
GPN3-208ENST00000550974 RGS19P49795 217 aa16.49■□□□□ 0.23
GPN3-208ENST00000550974 ZCRB1Q8TBF4 217 aaKnown RBP16.49■□□□□ 0.23
GPN3-208ENST00000550974 LTV1Q96GA3 475 aaPredicted RBP16.49■□□□□ 0.23
GPN3-208ENST00000550974 KIAA1551Q9HCM1 1747 aa16.49■□□□□ 0.23
GPN3-208ENST00000550974 PALLDQ8WX93 1383 aa16.49■□□□□ 0.23
GPN3-208ENST00000550974 KIAA1210Q9ULL0 1709 aa16.48■□□□□ 0.23
GPN3-208ENST00000550974 STAC3Q96MF2 364 aa16.48■□□□□ 0.23
GPN3-208ENST00000550974 C4BP0C0L5 1744 aa16.48■□□□□ 0.23
GPN3-208ENST00000550974 SSFA2P28290 1259 aa16.47■□□□□ 0.23
GPN3-208ENST00000550974 CREBZFQ9NS37 354 aa16.47■□□□□ 0.23
GPN3-208ENST00000550974 TOGARAM1Q9Y4F4 1720 aa16.47■□□□□ 0.23
GPN3-208ENST00000550974 CENPJQ9HC77 1338 aaPredicted RBP16.46■□□□□ 0.23
GPN3-208ENST00000550974 NSD3Q9BZ95 1437 aa16.46■□□□□ 0.23
GPN3-208ENST00000550974 TAF1LQ8IZX4 1826 aa16.45■□□□□ 0.22
GPN3-208ENST00000550974 MPRIPQ6WCQ1 1025 aa16.44■□□□□ 0.22
GPN3-208ENST00000550974 DCAF5Q96JK2 942 aa16.44■□□□□ 0.22
GPN3-208ENST00000550974 CCDC87Q9NVE4 849 aa16.44■□□□□ 0.22
GPN3-208ENST00000550974 PIM2Q9P1W9 311 aa16.44■□□□□ 0.22
GPN3-208ENST00000550974 KIF13BQ9NQT8 1826 aa16.44■□□□□ 0.22
GPN3-208ENST00000550974 KCNA3P22001 575 aa16.43■□□□□ 0.22
GPN3-208ENST00000550974 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.43■□□□□ 0.22
GPN3-208ENST00000550974 UBR3Q6ZT12 1888 aa16.42■□□□□ 0.22
GPN3-208ENST00000550974 GLTPD2A6NH11 291 aa16.42■□□□□ 0.22
GPN3-208ENST00000550974 NBPF1Q3BBV0 1214 aa16.42■□□□□ 0.22
GPN3-208ENST00000550974 DALRD3Q5D0E6 543 aaKnown RBP16.42■□□□□ 0.22
GPN3-208ENST00000550974 CFAP44Q96MT7 982 aa16.42■□□□□ 0.22
GPN3-208ENST00000550974 LTN1O94822 1766 aa16.41■□□□□ 0.22
GPN3-208ENST00000550974 CNTNAP1P78357 1384 aa16.41■□□□□ 0.22
GPN3-208ENST00000550974 KTN1Q86UP2 1357 aaKnown RBP16.41■□□□□ 0.22
GPN3-208ENST00000550974 GNPATO15228 680 aa16.41■□□□□ 0.22
GPN3-208ENST00000550974 HSPA8P11142 646 aaKnown RBP16.4■□□□□ 0.22
GPN3-208ENST00000550974 LINC00116Q8NCU8 138 aa16.4■□□□□ 0.22
GPN3-208ENST00000550974 WBP1LQ9NX94 342 aa16.4■□□□□ 0.22
GPN3-208ENST00000550974 NME9Q86XW9 330 aa16.39■□□□□ 0.21
GPN3-208ENST00000550974 SMARCC1Q92922 1105 aaPredicted RBP16.39■□□□□ 0.21
GPN3-208ENST00000550974 MEGF6O75095 1541 aa16.39■□□□□ 0.21
GPN3-208ENST00000550974 USP31Q70CQ4 1352 aa16.38■□□□□ 0.21
GPN3-208ENST00000550974 VEGFBP49765 207 aa16.38■□□□□ 0.21
GPN3-208ENST00000550974 TMF1P82094 1093 aa16.38■□□□□ 0.21
GPN3-208ENST00000550974 RASSF7Q02833 373 aa16.38■□□□□ 0.21
GPN3-208ENST00000550974 NLGN1Q8N2Q7 840 aa16.38■□□□□ 0.21
GPN3-208ENST00000550974 IP6K1Q92551 441 aa16.38■□□□□ 0.21
GPN3-208ENST00000550974 EVC2Q86UK5 1308 aa16.38■□□□□ 0.21
GPN3-208ENST00000550974 ZC3H4Q9UPT8 1303 aaKnown RBP16.38■□□□□ 0.21
GPN3-208ENST00000550974 ARFGEF1Q9Y6D6 1849 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms