RNA–Protein interactions for RNA: ENST00000550891.4

SCN8A-206, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 1 (best)

Gene SCN8A, Length 3,253 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-206ENST00000550891 PCDHB15Q9Y5E8 787 aa19.71■□□□□ 0.75
SCN8A-206ENST00000550891 MSH6P52701 1360 aa19.71■□□□□ 0.75
SCN8A-206ENST00000550891 USP54Q70EL1 1684 aa19.71■□□□□ 0.75
SCN8A-206ENST00000550891 API5Q9BZZ5 524 aaKnown RBP19.7■□□□□ 0.74
SCN8A-206ENST00000550891 ERICH6Q7L0X2 663 aa19.69■□□□□ 0.74
SCN8A-206ENST00000550891 NCOA3Q9Y6Q9 1424 aa19.69■□□□□ 0.74
SCN8A-206ENST00000550891 BACH2Q9BYV9 841 aa19.68■□□□□ 0.74
SCN8A-206ENST00000550891 DCCP43146 1447 aa19.68■□□□□ 0.74
SCN8A-206ENST00000550891 NPHP3Q7Z494 1330 aa19.67■□□□□ 0.74
SCN8A-206ENST00000550891 KIF1AQ12756 1690 aa19.67■□□□□ 0.74
SCN8A-206ENST00000550891 ARHGEF25Q86VW2 580 aa19.67■□□□□ 0.74
SCN8A-206ENST00000550891 MIS18AQ9NYP9 233 aa19.67■□□□□ 0.74
SCN8A-206ENST00000550891 MARF1Q9Y4F3 1742 aaKnown RBP19.67■□□□□ 0.74
SCN8A-206ENST00000550891 NPM2Q86SE8 214 aaKnown RBP19.66■□□□□ 0.74
SCN8A-206ENST00000550891 KIAA0232Q92628 1395 aa19.66■□□□□ 0.74
SCN8A-206ENST00000550891 MAP3K5Q99683 1374 aa19.66■□□□□ 0.74
SCN8A-206ENST00000550891 NFAT5O94916 1531 aa19.66■□□□□ 0.74
SCN8A-206ENST00000550891 NBPF6Q5VWK0 638 aa19.66■□□□□ 0.74
SCN8A-206ENST00000550891 NBPF4Q96M43 638 aa19.66■□□□□ 0.74
SCN8A-206ENST00000550891 LTN1O94822 1766 aa19.65■□□□□ 0.74
SCN8A-206ENST00000550891 MST1RQ04912 1400 aa19.65■□□□□ 0.74
SCN8A-206ENST00000550891 KRT24Q2M2I5 525 aa19.64■□□□□ 0.74
SCN8A-206ENST00000550891 CRB1P82279 1406 aa19.64■□□□□ 0.73
SCN8A-206ENST00000550891 ZC3H6P61129 1189 aaKnown RBP19.63■□□□□ 0.73
SCN8A-206ENST00000550891 FAM161AQ3B820 660 aa19.63■□□□□ 0.73
SCN8A-206ENST00000550891 ANKRD24Q8TF21 1146 aa19.63■□□□□ 0.73
SCN8A-206ENST00000550891 LRRC59Q96AG4 307 aaKnown RBP19.63■□□□□ 0.73
SCN8A-206ENST00000550891 USP19O94966 1318 aa19.63■□□□□ 0.73
SCN8A-206ENST00000550891 PLEKHO1Q53GL0 409 aaPredicted RBP19.63■□□□□ 0.73
SCN8A-206ENST00000550891 ZBTB40Q9NUA8 1239 aa19.63■□□□□ 0.73
SCN8A-206ENST00000550891 KDM4FA0A1W2PPD8 638 aa19.62■□□□□ 0.73
SCN8A-206ENST00000550891 STK31Q9BXU1 1019 aa19.62■□□□□ 0.73
SCN8A-206ENST00000550891 DDX17Q92841 729 aaKnown RBP19.61■□□□□ 0.73
SCN8A-206ENST00000550891 TAF7Q15545 349 aaPredicted RBP19.61■□□□□ 0.73
SCN8A-206ENST00000550891 HDAC1Q13547 482 aaPredicted RBP19.6■□□□□ 0.73
SCN8A-206ENST00000550891 C1orf141Q5JVX7 400 aa19.6■□□□□ 0.73
SCN8A-206ENST00000550891 AMOTQ4VCS5 1084 aa19.6■□□□□ 0.73
SCN8A-206ENST00000550891 ZNF530Q6P9A1 599 aaPredicted RBP19.6■□□□□ 0.73
SCN8A-206ENST00000550891 PDZRN3Q9UPQ7 1066 aa19.6■□□□□ 0.73
SCN8A-206ENST00000550891 SLIT3O75094 1523 aa19.59■□□□□ 0.73
SCN8A-206ENST00000550891 SLC4A2P04920 1241 aa19.59■□□□□ 0.73
SCN8A-206ENST00000550891 ABCC4O15439 1325 aa19.59■□□□□ 0.73
SCN8A-206ENST00000550891 IL17REQ8NFR9 667 aa19.58■□□□□ 0.73
SCN8A-206ENST00000550891 TEFQ10587 303 aa19.58■□□□□ 0.72
SCN8A-206ENST00000550891 PTPRCP08575 1304 aa19.58■□□□□ 0.72
SCN8A-206ENST00000550891 CSB-PGBD3P0DP91 1061 aa19.57■□□□□ 0.72
SCN8A-206ENST00000550891 BABAM1Q9NWV8 329 aa19.57■□□□□ 0.72
SCN8A-206ENST00000550891 ZBTB7BO15156 539 aaPredicted RBP19.56■□□□□ 0.72
SCN8A-206ENST00000550891 LMTK3Q96Q04 1460 aa19.56■□□□□ 0.72
SCN8A-206ENST00000550891 CCDC30Q5VVM6 783 aa19.56■□□□□ 0.72
SCN8A-206ENST00000550891 NLRP2Q9NX02 1062 aa19.56■□□□□ 0.72
SCN8A-206ENST00000550891 AKAP4Q5JQC9 854 aa19.56■□□□□ 0.72
SCN8A-206ENST00000550891 STRCP1A6NGW2 1772 aa19.55■□□□□ 0.72
SCN8A-206ENST00000550891 TRPM3Q9HCF6 1732 aaPredicted RBP19.55■□□□□ 0.72
SCN8A-206ENST00000550891 RAPGEF4Q8WZA2 1011 aa19.55■□□□□ 0.72
SCN8A-206ENST00000550891 AXIN2Q9Y2T1 843 aa19.54■□□□□ 0.72
SCN8A-206ENST00000550891 IPO9Q96P70 1041 aaKnown RBP19.54■□□□□ 0.72
SCN8A-206ENST00000550891 ZNF335Q9H4Z2 1342 aaPredicted RBP19.54■□□□□ 0.72
SCN8A-206ENST00000550891 CABLES1Q8TDN4 633 aa19.54■□□□□ 0.72
SCN8A-206ENST00000550891 CHMP4AQ9BY43 222 aa19.54■□□□□ 0.72
SCN8A-206ENST00000550891 TNS3Q68CZ2 1445 aa19.53■□□□□ 0.72
SCN8A-206ENST00000550891 C1orf115Q9H7X2 142 aa19.53■□□□□ 0.72
SCN8A-206ENST00000550891 PHRF1Q9P1Y6 1649 aaKnown RBP19.53■□□□□ 0.72
SCN8A-206ENST00000550891 ERBB3P21860 1342 aa19.53■□□□□ 0.72
SCN8A-206ENST00000550891 SOS1Q07889 1333 aaPredicted RBP19.53■□□□□ 0.72
SCN8A-206ENST00000550891 ZBTB47Q9UFB7 747 aaPredicted RBP19.52■□□□□ 0.72
SCN8A-206ENST00000550891 SLC4A10Q6U841 1118 aa19.52■□□□□ 0.71
SCN8A-206ENST00000550891 NECTIN2Q92692 538 aa19.52■□□□□ 0.71
SCN8A-206ENST00000550891 C8orf34Q49A92 452 aa19.51■□□□□ 0.71
SCN8A-206ENST00000550891 INTS3Q68E01 1043 aaKnown RBP19.51■□□□□ 0.71
SCN8A-206ENST00000550891 BRINP3Q76B58 766 aa19.51■□□□□ 0.71
SCN8A-206ENST00000550891 SPATA31A3Q5VYP0 1347 aa19.51■□□□□ 0.71
SCN8A-206ENST00000550891 MPRIPQ6WCQ1 1025 aa19.51■□□□□ 0.71
SCN8A-206ENST00000550891 SLAIN2Q9P270 581 aa19.51■□□□□ 0.71
SCN8A-206ENST00000550891 MSH5O43196 834 aa19.5■□□□□ 0.71
SCN8A-206ENST00000550891 SMC5Q8IY18 1101 aa19.5■□□□□ 0.71
SCN8A-206ENST00000550891 LGR6Q9HBX8 967 aa19.5■□□□□ 0.71
SCN8A-206ENST00000550891 FKBP5Q13451 457 aaPredicted RBP19.49■□□□□ 0.71
SCN8A-206ENST00000550891 HDGFL1Q5TGJ6 251 aa19.49■□□□□ 0.71
SCN8A-206ENST00000550891 GCC1Q96CN9 775 aa19.49■□□□□ 0.71
SCN8A-206ENST00000550891 NOP58Q9Y2X3 529 aaKnown RBP19.49■□□□□ 0.71
SCN8A-206ENST00000550891 BTBD11A6QL63 1104 aa19.49■□□□□ 0.71
SCN8A-206ENST00000550891 TATP17735 454 aaPredicted RBP19.49■□□□□ 0.71
SCN8A-206ENST00000550891 CHRNA2Q15822 529 aa19.49■□□□□ 0.71
SCN8A-206ENST00000550891 CEMIPQ8WUJ3 1361 aa19.48■□□□□ 0.71
SCN8A-206ENST00000550891 ALS2Q96Q42 1657 aa19.48■□□□□ 0.71
SCN8A-206ENST00000550891 DDRGK1Q96HY6 314 aa19.48■□□□□ 0.71
SCN8A-206ENST00000550891 CCT4P50991 539 aaKnown RBP19.47■□□□□ 0.71
SCN8A-206ENST00000550891 UPF2Q9HAU5 1272 aaKnown RBP19.47■□□□□ 0.71
SCN8A-206ENST00000550891 DAXXQ9UER7 740 aaPredicted RBP19.47■□□□□ 0.71
SCN8A-206ENST00000550891 FLIIQ13045 1269 aa19.46■□□□□ 0.71
SCN8A-206ENST00000550891 MED1Q15648 1581 aaPredicted RBP19.46■□□□□ 0.71
SCN8A-206ENST00000550891 RNMTO43148 476 aaKnown RBP19.46■□□□□ 0.71
SCN8A-206ENST00000550891 LRRC37A3O60309 1634 aa19.46■□□□□ 0.71
SCN8A-206ENST00000550891 EIF2S2P20042 333 aaKnown RBP19.46■□□□□ 0.71
SCN8A-206ENST00000550891 ANKRD45Q5TZF3 282 aa19.46■□□□□ 0.71
SCN8A-206ENST00000550891 G2E3Q7L622 706 aa19.46■□□□□ 0.71
SCN8A-206ENST00000550891 SPG7Q9UQ90 795 aa19.46■□□□□ 0.71
SCN8A-206ENST00000550891 NCAPD2Q15021 1401 aa19.45■□□□□ 0.7
SCN8A-206ENST00000550891 LNPKQ9C0E8 428 aa19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms