RNA–Protein interactions for RNA: ENST00000550711.1

CHST11-206, Transcript of carbohydrate sulfotransferase 11, humanhuman

TSL 4

Gene CHST11, Length 423 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHST11-206ENST00000550711 TFCP2L1Q9NZI6 479 aa18.56■□□□□ 0.56
CHST11-206ENST00000550711 HSPA6P17066 643 aa18.55■□□□□ 0.56
CHST11-206ENST00000550711 MSL1Q68DK7 614 aa18.55■□□□□ 0.56
CHST11-206ENST00000550711 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.55■□□□□ 0.56
CHST11-206ENST00000550711 PRIM1P49642 420 aaKnown RBP18.54■□□□□ 0.56
CHST11-206ENST00000550711 AMIGO3Q86WK7 504 aa18.54■□□□□ 0.56
CHST11-206ENST00000550711 GRIN3BO60391 1043 aa18.52■□□□□ 0.56
CHST11-206ENST00000550711 DDX54Q8TDD1 881 aaKnown RBP18.52■□□□□ 0.56
CHST11-206ENST00000550711 KIAA1551Q9HCM1 1747 aa18.52■□□□□ 0.55
CHST11-206ENST00000550711 CICQ96RK0 1608 aaPredicted RBP18.51■□□□□ 0.55
CHST11-206ENST00000550711 UBR3Q6ZT12 1888 aa18.5■□□□□ 0.55
CHST11-206ENST00000550711 ZNF526Q8TF50 670 aaPredicted RBP18.5■□□□□ 0.55
CHST11-206ENST00000550711 L3MBTL2Q969R5 705 aa18.5■□□□□ 0.55
CHST11-206ENST00000550711 KIF3CO14782 793 aa18.49■□□□□ 0.55
CHST11-206ENST00000550711 GPBP1L1Q9HC44 474 aaPredicted RBP18.48■□□□□ 0.55
CHST11-206ENST00000550711 CCNL1Q9UK58 526 aaPredicted RBP18.48■□□□□ 0.55
CHST11-206ENST00000550711 C4BP0C0L5 1744 aa18.47■□□□□ 0.55
CHST11-206ENST00000550711 SYTL4Q96C24 671 aaPredicted RBP18.47■□□□□ 0.55
CHST11-206ENST00000550711 EDC4Q6P2E9 1401 aaKnown RBP18.47■□□□□ 0.55
CHST11-206ENST00000550711 A0A1W2PP64 1363 aa18.46■□□□□ 0.55
CHST11-206ENST00000550711 FBLN1P23142 703 aa18.46■□□□□ 0.55
CHST11-206ENST00000550711 SMIM5Q71RC9 77 aa18.46■□□□□ 0.55
CHST11-206ENST00000550711 IP6K1Q92551 441 aa18.46■□□□□ 0.55
CHST11-206ENST00000550711 MAP2P11137 1827 aaKnown RBP18.46■□□□□ 0.55
CHST11-206ENST00000550711 WWC3Q9ULE0 1092 aa18.45■□□□□ 0.54
CHST11-206ENST00000550711 ITGB4P16144 1822 aa18.44■□□□□ 0.54
CHST11-206ENST00000550711 LTV1Q96GA3 475 aaPredicted RBP18.44■□□□□ 0.54
CHST11-206ENST00000550711 CD2APQ9Y5K6 639 aa18.44■□□□□ 0.54
CHST11-206ENST00000550711 ROCK2O75116 1388 aaKnown RBP18.43■□□□□ 0.54
CHST11-206ENST00000550711 DNAJC5GQ8N7S2 189 aa18.43■□□□□ 0.54
CHST11-206ENST00000550711 SLC12A5Q9H2X9 1139 aa18.43■□□□□ 0.54
CHST11-206ENST00000550711 MAP3K19Q56UN5 1328 aa18.42■□□□□ 0.54
CHST11-206ENST00000550711 KIF13BQ9NQT8 1826 aa18.42■□□□□ 0.54
CHST11-206ENST00000550711 MSH5O43196 834 aa18.41■□□□□ 0.54
CHST11-206ENST00000550711 IGSF1Q8N6C5 1336 aa18.41■□□□□ 0.54
CHST11-206ENST00000550711 WDR90Q96KV7 1748 aa18.4■□□□□ 0.54
CHST11-206ENST00000550711 HOXC9P31274 260 aa18.4■□□□□ 0.54
CHST11-206ENST00000550711 ZCRB1Q8TBF4 217 aaKnown RBP18.4■□□□□ 0.54
CHST11-206ENST00000550711 USP47Q96K76 1375 aa18.39■□□□□ 0.53
CHST11-206ENST00000550711 N4BP2Q86UW6 1770 aaPredicted RBP18.38■□□□□ 0.53
CHST11-206ENST00000550711 SIN3AQ96ST3 1273 aa18.38■□□□□ 0.53
CHST11-206ENST00000550711 BRCA1P38398 1863 aaKnown RBP18.37■□□□□ 0.53
CHST11-206ENST00000550711 NBPF6Q5VWK0 638 aa18.37■□□□□ 0.53
CHST11-206ENST00000550711 USHBP1Q8N6Y0 703 aa18.37■□□□□ 0.53
CHST11-206ENST00000550711 NBPF4Q96M43 638 aa18.37■□□□□ 0.53
CHST11-206ENST00000550711 PALLDQ8WX93 1383 aa18.37■□□□□ 0.53
CHST11-206ENST00000550711 PKD1L3Q7Z443 1732 aa18.37■□□□□ 0.53
CHST11-206ENST00000550711 PXDNLA1KZ92 1463 aa18.36■□□□□ 0.53
CHST11-206ENST00000550711 TMC1Q8TDI8 760 aa18.34■□□□□ 0.53
CHST11-206ENST00000550711 HTRA3P83110 453 aa18.32■□□□□ 0.52
CHST11-206ENST00000550711 CYP27B1O15528 508 aa18.31■□□□□ 0.52
CHST11-206ENST00000550711 HDGFL2Q7Z4V5 671 aaPredicted RBP18.31■□□□□ 0.52
CHST11-206ENST00000550711 RTL1A6NKG5 1358 aa18.3■□□□□ 0.52
CHST11-206ENST00000550711 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.3■□□□□ 0.52
CHST11-206ENST00000550711 APLP1P51693 650 aa18.3■□□□□ 0.52
CHST11-206ENST00000550711 COL13A1Q5TAT6 717 aaPredicted RBP18.3■□□□□ 0.52
CHST11-206ENST00000550711 PHF14O94880 888 aa18.29■□□□□ 0.52
CHST11-206ENST00000550711 RRS1Q15050 365 aaKnown RBP18.29■□□□□ 0.52
CHST11-206ENST00000550711 LINC00116Q8NCU8 138 aa18.29■□□□□ 0.52
CHST11-206ENST00000550711 NMRK2Q9NPI5 230 aa18.29■□□□□ 0.52
CHST11-206ENST00000550711 NCAPD2Q15021 1401 aa18.27■□□□□ 0.52
CHST11-206ENST00000550711 MPRIPQ6WCQ1 1025 aa18.27■□□□□ 0.52
CHST11-206ENST00000550711 FLAD1Q8NFF5 587 aa18.27■□□□□ 0.52
CHST11-206ENST00000550711 C10orf71Q711Q0 1435 aa18.26■□□□□ 0.51
CHST11-206ENST00000550711 ITPK1Q13572 414 aa18.26■□□□□ 0.51
CHST11-206ENST00000550711 NSD3Q9BZ95 1437 aa18.25■□□□□ 0.51
CHST11-206ENST00000550711 TOMM70O94826 608 aa18.25■□□□□ 0.51
CHST11-206ENST00000550711 AMPHP49418 695 aa18.25■□□□□ 0.51
CHST11-206ENST00000550711 PIGBQ92521 554 aa18.25■□□□□ 0.51
CHST11-206ENST00000550711 TESK2Q96S53 571 aa18.25■□□□□ 0.51
CHST11-206ENST00000550711 TERF2IPQ9NYB0 399 aa18.25■□□□□ 0.51
CHST11-206ENST00000550711 ARFGEF1Q9Y6D6 1849 aa18.25■□□□□ 0.51
CHST11-206ENST00000550711 CGNL1Q0VF96 1302 aa18.24■□□□□ 0.51
CHST11-206ENST00000550711 PCDH11XQ9BZA7 1347 aa18.24■□□□□ 0.51
CHST11-206ENST00000550711 PCDH11YQ9BZA8 1340 aa18.24■□□□□ 0.51
CHST11-206ENST00000550711 C4AP0C0L4 1744 aa18.24■□□□□ 0.51
CHST11-206ENST00000550711 AK7Q96M32 723 aa18.24■□□□□ 0.51
CHST11-206ENST00000550711 COL5A3P25940 1745 aaPredicted RBP18.23■□□□□ 0.51
CHST11-206ENST00000550711 ANKRD26Q9UPS8 1709 aa18.23■□□□□ 0.51
CHST11-206ENST00000550711 KIF20BQ96Q89 1820 aa18.23■□□□□ 0.51
CHST11-206ENST00000550711 HSP90AB2PQ58FF8 381 aa18.23■□□□□ 0.51
CHST11-206ENST00000550711 JMYQ8N9B5 988 aa18.23■□□□□ 0.51
CHST11-206ENST00000550711 COG3Q96JB2 828 aa18.23■□□□□ 0.51
CHST11-206ENST00000550711 SSFA2P28290 1259 aa18.22■□□□□ 0.51
CHST11-206ENST00000550711 INSRP06213 1382 aa18.21■□□□□ 0.51
CHST11-206ENST00000550711 KDRP35968 1356 aa18.21■□□□□ 0.51
CHST11-206ENST00000550711 MYH14Q7Z406 1995 aaKnown RBP18.21■□□□□ 0.51
CHST11-206ENST00000550711 SBF1O95248 1867 aa18.21■□□□□ 0.51
CHST11-206ENST00000550711 RAPGEF4Q8WZA2 1011 aa18.21■□□□□ 0.51
CHST11-206ENST00000550711 PUS7Q96PZ0 661 aaKnown RBP18.21■□□□□ 0.51
CHST11-206ENST00000550711 CARD11Q9BXL7 1154 aa18.21■□□□□ 0.51
CHST11-206ENST00000550711 KCPQ6ZWJ8 1503 aa18.2■□□□□ 0.5
CHST11-206ENST00000550711 LOC102724428A0A0B4J2F2 783 aa18.2■□□□□ 0.5
CHST11-206ENST00000550711 FYB1O15117 783 aa18.2■□□□□ 0.5
CHST11-206ENST00000550711 MMP10P09238 476 aa18.2■□□□□ 0.5
CHST11-206ENST00000550711 TATP17735 454 aaPredicted RBP18.2■□□□□ 0.5
CHST11-206ENST00000550711 SIK1P57059 783 aa18.2■□□□□ 0.5
CHST11-206ENST00000550711 NEUROD1Q13562 356 aa18.2■□□□□ 0.5
CHST11-206ENST00000550711 KLRG1Q96E93 195 aa18.2■□□□□ 0.5
CHST11-206ENST00000550711 A0A0G2JLW4 131 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms