RNA–Protein interactions for RNA: ENST00000550558.5

ASIC1-206, Transcript of acid sensing ion channel subunit 1, humanhuman

TSL 2

Gene ASIC1, Length 3,819 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ASIC1-206ENST00000550558 SSFA2P28290 1259 aa20.6■□□□□ 0.89
ASIC1-206ENST00000550558 BMP2KLQ5H9B9 411 aa20.6■□□□□ 0.89
ASIC1-206ENST00000550558 RNF17Q9BXT8 1623 aaKnown RBP20.6■□□□□ 0.89
ASIC1-206ENST00000550558 PRPF40AO75400 957 aaKnown RBP20.6■□□□□ 0.89
ASIC1-206ENST00000550558 TTC5Q8N0Z6 440 aa20.6■□□□□ 0.89
ASIC1-206ENST00000550558 MPNDQ8N594 471 aa20.6■□□□□ 0.89
ASIC1-206ENST00000550558 PIP4K2AP48426 406 aaPredicted RBP20.59■□□□□ 0.89
ASIC1-206ENST00000550558 ABCC3O15438 1527 aa20.59■□□□□ 0.89
ASIC1-206ENST00000550558 ABCA6Q8N139 1617 aa20.59■□□□□ 0.89
ASIC1-206ENST00000550558 GOLGA6L4A6NEF3 574 aa20.58■□□□□ 0.89
ASIC1-206ENST00000550558 SDSP20132 328 aa20.58■□□□□ 0.89
ASIC1-206ENST00000550558 PRR36Q9H6K5 1346 aa20.58■□□□□ 0.89
ASIC1-206ENST00000550558 ANO8Q9HCE9 1232 aaPredicted RBP20.58■□□□□ 0.88
ASIC1-206ENST00000550558 ERC2O15083 957 aa20.57■□□□□ 0.88
ASIC1-206ENST00000550558 ATF3P18847 181 aa20.57■□□□□ 0.88
ASIC1-206ENST00000550558 FOSBP53539 338 aa20.57■□□□□ 0.88
ASIC1-206ENST00000550558 PLEKHO1Q53GL0 409 aaPredicted RBP20.57■□□□□ 0.88
ASIC1-206ENST00000550558 TNPO1Q92973 898 aaKnown RBP20.57■□□□□ 0.88
ASIC1-206ENST00000550558 GPATCH3Q96I76 525 aa20.57■□□□□ 0.88
ASIC1-206ENST00000550558 NEXNQ0ZGT2 675 aa20.57■□□□□ 0.88
ASIC1-206ENST00000550558 PPP6R1Q9UPN7 881 aa20.57■□□□□ 0.88
ASIC1-206ENST00000550558 G3BP1Q13283 466 aaKnown RBP eCLIP20.56■□□□□ 0.88
ASIC1-206ENST00000550558 CWC27Q6UX04 472 aaKnown RBP20.56■□□□□ 0.88
ASIC1-206ENST00000550558 CLASP1Q7Z460 1538 aa20.56■□□□□ 0.88
ASIC1-206ENST00000550558 CEP152O94986 1710 aa20.56■□□□□ 0.88
ASIC1-206ENST00000550558 PI4KAP2A4QPH2 592 aa20.56■□□□□ 0.88
ASIC1-206ENST00000550558 PI4KAP1Q8N8J0 262 aa20.56■□□□□ 0.88
ASIC1-206ENST00000550558 RABEP1Q15276 862 aa20.55■□□□□ 0.88
ASIC1-206ENST00000550558 GORABQ5T7V8 394 aa20.55■□□□□ 0.88
ASIC1-206ENST00000550558 SYTL4Q96C24 671 aaPredicted RBP20.55■□□□□ 0.88
ASIC1-206ENST00000550558 PHAXQ9H814 394 aaKnown RBP20.55■□□□□ 0.88
ASIC1-206ENST00000550558 POLR1AO95602 1720 aaPredicted RBP20.55■□□□□ 0.88
ASIC1-206ENST00000550558 MSNP26038 577 aaKnown RBP20.55■□□□□ 0.88
ASIC1-206ENST00000550558 CLASRPQ8N2M8 674 aaKnown RBP20.55■□□□□ 0.88
ASIC1-206ENST00000550558 NEO1Q92859 1461 aa20.54■□□□□ 0.88
ASIC1-206ENST00000550558 VPS37CA5D8V6 355 aaPredicted RBP20.54■□□□□ 0.88
ASIC1-206ENST00000550558 HSP90B1P14625 803 aaKnown RBP20.54■□□□□ 0.88
ASIC1-206ENST00000550558 CHRNA2Q15822 529 aa20.53■□□□□ 0.88
ASIC1-206ENST00000550558 PANK2Q9BZ23 570 aa20.53■□□□□ 0.88
ASIC1-206ENST00000550558 MX1P20591 662 aa20.53■□□□□ 0.88
ASIC1-206ENST00000550558 CEP85Q6P2H3 762 aa20.53■□□□□ 0.88
ASIC1-206ENST00000550558 ARHGAP45Q92619 1136 aa20.53■□□□□ 0.88
ASIC1-206ENST00000550558 NEUROD6Q96NK8 337 aa20.53■□□□□ 0.88
ASIC1-206ENST00000550558 STRN4Q9NRL3 753 aa20.53■□□□□ 0.88
ASIC1-206ENST00000550558 PLEKHM2Q8IWE5 1019 aa20.52■□□□□ 0.88
ASIC1-206ENST00000550558 ANKRD44Q8N8A2 993 aa20.52■□□□□ 0.88
ASIC1-206ENST00000550558 SHROOM2Q13796 1616 aa20.52■□□□□ 0.88
ASIC1-206ENST00000550558 SLC39A6Q13433 755 aa20.52■□□□□ 0.88
ASIC1-206ENST00000550558 TTC22Q5TAA0 569 aa20.52■□□□□ 0.88
ASIC1-206ENST00000550558 TAF7LQ5H9L4 462 aa20.52■□□□□ 0.87
ASIC1-206ENST00000550558 CABLES1Q8TDN4 633 aa20.52■□□□□ 0.87
ASIC1-206ENST00000550558 CCDC85AQ96PX6 553 aaPredicted RBP20.52■□□□□ 0.87
ASIC1-206ENST00000550558 PPRC1Q5VV67 1664 aaKnown RBP20.51■□□□□ 0.87
ASIC1-206ENST00000550558 CHPF2Q9P2E5 772 aa20.51■□□□□ 0.87
ASIC1-206ENST00000550558 HECW2Q9P2P5 1572 aa20.51■□□□□ 0.87
ASIC1-206ENST00000550558 DDX58O95786 925 aaKnown RBP20.5■□□□□ 0.87
ASIC1-206ENST00000550558 EVA1CP58658 441 aa20.5■□□□□ 0.87
ASIC1-206ENST00000550558 PPP1R42Q7Z4L9 355 aa20.5■□□□□ 0.87
ASIC1-206ENST00000550558 NUCB2P80303 420 aa20.5■□□□□ 0.87
ASIC1-206ENST00000550558 MSH6P52701 1360 aa20.5■□□□□ 0.87
ASIC1-206ENST00000550558 EDC4Q6P2E9 1401 aaKnown RBP20.5■□□□□ 0.87
ASIC1-206ENST00000550558 KAT6BQ8WYB5 2073 aa20.49■□□□□ 0.87
ASIC1-206ENST00000550558 SPG7Q9UQ90 795 aa20.49■□□□□ 0.87
ASIC1-206ENST00000550558 ROBO2Q9HCK4 1378 aa20.49■□□□□ 0.87
ASIC1-206ENST00000550558 LGR6Q9HBX8 967 aa20.49■□□□□ 0.87
ASIC1-206ENST00000550558 GDPD2Q9HCC8 539 aa20.49■□□□□ 0.87
ASIC1-206ENST00000550558 PHF23Q9BUL5 403 aaPredicted RBP20.48■□□□□ 0.87
ASIC1-206ENST00000550558 DCTPP1Q9H773 170 aa20.48■□□□□ 0.87
ASIC1-206ENST00000550558 ZFYVE9O95405 1425 aa20.48■□□□□ 0.87
ASIC1-206ENST00000550558 CHL1O00533 1208 aa20.48■□□□□ 0.87
ASIC1-206ENST00000550558 PTCD1O75127 700 aaKnown RBP20.48■□□□□ 0.87
ASIC1-206ENST00000550558 ORAI2Q96SN7 254 aa20.48■□□□□ 0.87
ASIC1-206ENST00000550558 DNAJC2Q99543 621 aaKnown RBP20.48■□□□□ 0.87
ASIC1-206ENST00000550558 CHMP4AQ9BY43 222 aa20.48■□□□□ 0.87
ASIC1-206ENST00000550558 USP19O94966 1318 aa20.48■□□□□ 0.87
ASIC1-206ENST00000550558 AACSQ86V21 672 aa20.47■□□□□ 0.87
ASIC1-206ENST00000550558 FSD1Q9BTV5 496 aa20.47■□□□□ 0.87
ASIC1-206ENST00000550558 CCDC8Q9H0W5 538 aaPredicted RBP20.47■□□□□ 0.87
ASIC1-206ENST00000550558 SIRT2Q8IXJ6 389 aa20.47■□□□□ 0.87
ASIC1-206ENST00000550558 DDX17Q92841 729 aaKnown RBP20.47■□□□□ 0.87
ASIC1-206ENST00000550558 SKOR2Q2VWA4 1001 aaPredicted RBP20.47■□□□□ 0.87
ASIC1-206ENST00000550558 HOXC9P31274 260 aa20.46■□□□□ 0.87
ASIC1-206ENST00000550558 PDE1AP54750 535 aa20.46■□□□□ 0.87
ASIC1-206ENST00000550558 PTPRCP08575 1304 aa20.46■□□□□ 0.87
ASIC1-206ENST00000550558 FAM177BA6PVY3 158 aa20.46■□□□□ 0.87
ASIC1-206ENST00000550558 CNTROBQ8N137 903 aa20.45■□□□□ 0.86
ASIC1-206ENST00000550558 PA2G4Q9UQ80 394 aaKnown RBP20.45■□□□□ 0.86
ASIC1-206ENST00000550558 ABCA9Q8IUA7 1624 aa20.45■□□□□ 0.86
ASIC1-206ENST00000550558 PNMA6EA0A0J9YXQ4 647 aa20.45■□□□□ 0.86
ASIC1-206ENST00000550558 ZGPATQ8N5A5 531 aaKnown RBP20.45■□□□□ 0.86
ASIC1-206ENST00000550558 DNAAF4Q8WXU2 420 aa20.45■□□□□ 0.86
ASIC1-206ENST00000550558 TMEM2Q9UHN6 1383 aa20.45■□□□□ 0.86
ASIC1-206ENST00000550558 FIBPO43427 364 aa20.44■□□□□ 0.86
ASIC1-206ENST00000550558 ZKSCAN1P17029 563 aaPredicted RBP20.44■□□□□ 0.86
ASIC1-206ENST00000550558 STK3Q13188 491 aa20.44■□□□□ 0.86
ASIC1-206ENST00000550558 GRPEL1Q9HAV7 217 aa20.44■□□□□ 0.86
ASIC1-206ENST00000550558 SMC3Q9UQE7 1217 aa20.44■□□□□ 0.86
ASIC1-206ENST00000550558 GLI2P10070 1586 aa20.44■□□□□ 0.86
ASIC1-206ENST00000550558 KCNQ3O43525 872 aa20.44■□□□□ 0.86
ASIC1-206ENST00000550558 MRE11P49959 708 aa20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms