RNA–Protein interactions for RNA: ENST00000550504.5

RAB5C-207, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB5C, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-207ENST00000550504 SPATA31A7Q8IWB4 1347 aa13.58□□□□□ -0.24
RAB5C-207ENST00000550504 IL2RBP14784 551 aa13.57□□□□□ -0.24
RAB5C-207ENST00000550504 TMPOP42166 694 aaKnown RBP13.57□□□□□ -0.24
RAB5C-207ENST00000550504 MTHFSDQ2M296 383 aaKnown RBP13.57□□□□□ -0.24
RAB5C-207ENST00000550504 NFE2L2Q16236 605 aa13.56□□□□□ -0.24
RAB5C-207ENST00000550504 PLEKHO1Q53GL0 409 aaPredicted RBP13.56□□□□□ -0.24
RAB5C-207ENST00000550504 SRCAPQ6ZRS2 3230 aa13.56□□□□□ -0.24
RAB5C-207ENST00000550504 RIPK4P57078 832 aa13.55□□□□□ -0.24
RAB5C-207ENST00000550504 TRPC5Q9UL62 973 aaPredicted RBP13.55□□□□□ -0.24
RAB5C-207ENST00000550504 PARP4Q9UKK3 1724 aaKnown RBP13.55□□□□□ -0.24
RAB5C-207ENST00000550504 OVOS2A0A0G2JMS6 1433 aa13.55□□□□□ -0.24
RAB5C-207ENST00000550504 ATRNO75882 1429 aa13.55□□□□□ -0.24
RAB5C-207ENST00000550504 AMOTQ4VCS5 1084 aa13.54□□□□□ -0.24
RAB5C-207ENST00000550504 ZNF772Q68DY9 489 aaPredicted RBP13.54□□□□□ -0.24
RAB5C-207ENST00000550504 ZNF530Q6P9A1 599 aaPredicted RBP13.54□□□□□ -0.24
RAB5C-207ENST00000550504 GAS2L2Q8NHY3 880 aa13.54□□□□□ -0.24
RAB5C-207ENST00000550504 QTRT2Q9H974 415 aaKnown RBP13.54□□□□□ -0.24
RAB5C-207ENST00000550504 SPG7Q9UQ90 795 aa13.54□□□□□ -0.24
RAB5C-207ENST00000550504 THRAP3Q9Y2W1 955 aaKnown RBP13.54□□□□□ -0.24
RAB5C-207ENST00000550504 DISP2A7MBM2 1401 aa13.54□□□□□ -0.24
RAB5C-207ENST00000550504 WNK3Q9BYP7 1800 aa13.53□□□□□ -0.24
RAB5C-207ENST00000550504 FAM98CQ17RN3 349 aaKnown RBP13.53□□□□□ -0.24
RAB5C-207ENST00000550504 GJD4Q96KN9 370 aaPredicted RBP13.53□□□□□ -0.24
RAB5C-207ENST00000550504 A0A0G2JS52 829 aa13.52□□□□□ -0.25
RAB5C-207ENST00000550504 MYT1Q01538 1121 aa13.52□□□□□ -0.25
RAB5C-207ENST00000550504 BARGINQ6ZT62 677 aa13.52□□□□□ -0.25
RAB5C-207ENST00000550504 ZCRB1Q8TBF4 217 aaKnown RBP13.52□□□□□ -0.25
RAB5C-207ENST00000550504 GLI3P10071 1580 aa13.52□□□□□ -0.25
RAB5C-207ENST00000550504 PKD1L3Q7Z443 1732 aa13.52□□□□□ -0.25
RAB5C-207ENST00000550504 DLG5Q8TDM6 1919 aa13.52□□□□□ -0.25
RAB5C-207ENST00000550504 MAP3K5Q99683 1374 aa13.51□□□□□ -0.25
RAB5C-207ENST00000550504 ZBED9Q6R2W3 1325 aa13.51□□□□□ -0.25
RAB5C-207ENST00000550504 DCTN1Q14203 1278 aa13.51□□□□□ -0.25
RAB5C-207ENST00000550504 C1orf141Q5JVX7 400 aa13.51□□□□□ -0.25
RAB5C-207ENST00000550504 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.51□□□□□ -0.25
RAB5C-207ENST00000550504 TRIM35Q9UPQ4 493 aa13.51□□□□□ -0.25
RAB5C-207ENST00000550504 GNAT3A8MTJ3 354 aa13.5□□□□□ -0.25
RAB5C-207ENST00000550504 EXOC5O00471 708 aa13.5□□□□□ -0.25
RAB5C-207ENST00000550504 LMOD3Q0VAK6 560 aa13.5□□□□□ -0.25
RAB5C-207ENST00000550504 MCM10Q7L590 875 aa13.5□□□□□ -0.25
RAB5C-207ENST00000550504 WWC1Q8IX03 1113 aa13.5□□□□□ -0.25
RAB5C-207ENST00000550504 NGEFQ8N5V2 710 aa13.5□□□□□ -0.25
RAB5C-207ENST00000550504 DDX54Q8TDD1 881 aaKnown RBP13.5□□□□□ -0.25
RAB5C-207ENST00000550504 RTF1Q92541 710 aaKnown RBP13.5□□□□□ -0.25
RAB5C-207ENST00000550504 THUMPD2Q9BTF0 503 aaKnown RBP13.5□□□□□ -0.25
RAB5C-207ENST00000550504 CDCA7Q9BWT1 371 aaPredicted RBP13.5□□□□□ -0.25
RAB5C-207ENST00000550504 PLEKHG2Q9H7P9 1386 aa13.49□□□□□ -0.25
RAB5C-207ENST00000550504 PCDH11XQ9BZA7 1347 aa13.49□□□□□ -0.25
RAB5C-207ENST00000550504 PCDH11YQ9BZA8 1340 aa13.49□□□□□ -0.25
RAB5C-207ENST00000550504 CYP27B1O15528 508 aa13.49□□□□□ -0.25
RAB5C-207ENST00000550504 PHKG2P15735 406 aa13.49□□□□□ -0.25
RAB5C-207ENST00000550504 CCDC27Q2M243 656 aa13.49□□□□□ -0.25
RAB5C-207ENST00000550504 AKAP4Q5JQC9 854 aa13.49□□□□□ -0.25
RAB5C-207ENST00000550504 LRRC37A3O60309 1634 aa13.49□□□□□ -0.25
RAB5C-207ENST00000550504 RGS12O14924 1447 aa13.48□□□□□ -0.25
RAB5C-207ENST00000550504 SHANK3Q9BYB0 1731 aa13.48□□□□□ -0.25
RAB5C-207ENST00000550504 DDB1Q16531 1140 aa13.48□□□□□ -0.25
RAB5C-207ENST00000550504 MPRIPQ6WCQ1 1025 aa13.48□□□□□ -0.25
RAB5C-207ENST00000550504 IFNL2Q8IZJ0 200 aa13.48□□□□□ -0.25
RAB5C-207ENST00000550504 TNS2Q63HR2 1409 aa13.47□□□□□ -0.25
RAB5C-207ENST00000550504 ZNF521Q96K83 1311 aa13.47□□□□□ -0.25
RAB5C-207ENST00000550504 NCBP3Q53F19 620 aaKnown RBP13.47□□□□□ -0.25
RAB5C-207ENST00000550504 LGR6Q9HBX8 967 aa13.47□□□□□ -0.25
RAB5C-207ENST00000550504 THSD7AQ9UPZ6 1657 aa13.47□□□□□ -0.25
RAB5C-207ENST00000550504 HTATSF1O43719 755 aaKnown RBP13.46□□□□□ -0.25
RAB5C-207ENST00000550504 RXRBP28702 533 aa13.46□□□□□ -0.25
RAB5C-207ENST00000550504 RBM6P78332 1123 aaKnown RBP13.46□□□□□ -0.25
RAB5C-207ENST00000550504 SEPT12Q8IYM1 358 aa13.46□□□□□ -0.25
RAB5C-207ENST00000550504 IL17REQ8NFR9 667 aa13.46□□□□□ -0.25
RAB5C-207ENST00000550504 CDCA7LQ96GN5 454 aa13.46□□□□□ -0.25
RAB5C-207ENST00000550504 RNMTO43148 476 aaKnown RBP13.45□□□□□ -0.26
RAB5C-207ENST00000550504 GOLGA2Q08379 1002 aa13.45□□□□□ -0.26
RAB5C-207ENST00000550504 WDR63Q8IWG1 891 aa13.45□□□□□ -0.26
RAB5C-207ENST00000550504 LAS1LQ9Y4W2 734 aaKnown RBP13.45□□□□□ -0.26
RAB5C-207ENST00000550504 EP400Q96L91 3159 aa13.44□□□□□ -0.26
RAB5C-207ENST00000550504 ONECUT3O60422 494 aaPredicted RBP13.44□□□□□ -0.26
RAB5C-207ENST00000550504 HSP90AB1P08238 724 aaKnown RBP13.44□□□□□ -0.26
RAB5C-207ENST00000550504 PDE3BQ13370 1112 aa13.44□□□□□ -0.26
RAB5C-207ENST00000550504 MARCH10Q8NA82 808 aaPredicted RBP13.44□□□□□ -0.26
RAB5C-207ENST00000550504 DCAF5Q96JK2 942 aa13.44□□□□□ -0.26
RAB5C-207ENST00000550504 SPINK5Q9NQ38 1064 aaPredicted RBP13.44□□□□□ -0.26
RAB5C-207ENST00000550504 KDM6AO15550 1401 aaPredicted RBP13.44□□□□□ -0.26
RAB5C-207ENST00000550504 CALD1Q05682 793 aaKnown RBP13.43□□□□□ -0.26
RAB5C-207ENST00000550504 VIRMAQ69YN4 1812 aaKnown RBP13.43□□□□□ -0.26
RAB5C-207ENST00000550504 TEFQ10587 303 aa13.42□□□□□ -0.26
RAB5C-207ENST00000550504 NKX1-1Q15270 411 aaPredicted RBP13.42□□□□□ -0.26
RAB5C-207ENST00000550504 SCN11AQ9UI33 1791 aa13.42□□□□□ -0.26
RAB5C-207ENST00000550504 CEMIPQ8WUJ3 1361 aa13.42□□□□□ -0.26
RAB5C-207ENST00000550504 IL16Q14005 1332 aa13.41□□□□□ -0.26
RAB5C-207ENST00000550504 E9PSI1 815 aa13.41□□□□□ -0.26
RAB5C-207ENST00000550504 SLFN5Q08AF3 891 aa13.41□□□□□ -0.26
RAB5C-207ENST00000550504 FAM182BQ5T319 152 aa13.41□□□□□ -0.26
RAB5C-207ENST00000550504 TSR2Q969E8 191 aaKnown RBP13.41□□□□□ -0.26
RAB5C-207ENST00000550504 MIS18AQ9NYP9 233 aa13.41□□□□□ -0.26
RAB5C-207ENST00000550504 ADAMTS7Q9UKP4 1686 aa13.4□□□□□ -0.26
RAB5C-207ENST00000550504 CABP4P57796 275 aa13.4□□□□□ -0.26
RAB5C-207ENST00000550504 MYH16Q9H6N6 1097 aa13.4□□□□□ -0.26
RAB5C-207ENST00000550504 IFT57Q9NWB7 429 aa13.4□□□□□ -0.26
RAB5C-207ENST00000550504 TOGARAM1Q9Y4F4 1720 aa13.39□□□□□ -0.27
RAB5C-207ENST00000550504 GNAI1P63096 354 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms