RNA–Protein interactions for RNA: ENST00000550352.1

GNPTAB-207, Transcript of N-acetylglucosamine-1-phosphate transferase subunits alpha and beta, humanhuman

TSL 3

Gene GNPTAB, Length 787 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNPTAB-207ENST00000550352 Q6ZVU0 165 aa9.59□□□□□ -0.87
GNPTAB-207ENST00000550352 CRIPAKQ8N1N5 446 aa9.59□□□□□ -0.87
GNPTAB-207ENST00000550352 ARID3AQ99856 593 aa9.59□□□□□ -0.87
GNPTAB-207ENST00000550352 AAASQ9NRG9 546 aa9.59□□□□□ -0.87
GNPTAB-207ENST00000550352 MYCP01106 439 aaPredicted RBP9.58□□□□□ -0.88
GNPTAB-207ENST00000550352 OSBPL3Q9H4L5 887 aa9.58□□□□□ -0.88
GNPTAB-207ENST00000550352 ESF1Q9H501 851 aaKnown RBP9.58□□□□□ -0.88
GNPTAB-207ENST00000550352 LCE2BO14633 110 aa9.57□□□□□ -0.88
GNPTAB-207ENST00000550352 LZTS3O60299 673 aaPredicted RBP9.57□□□□□ -0.88
GNPTAB-207ENST00000550352 BMP1P13497 986 aa9.57□□□□□ -0.88
GNPTAB-207ENST00000550352 MEIOBQ8N635 442 aa9.57□□□□□ -0.88
GNPTAB-207ENST00000550352 TRIM52Q96A61 297 aa9.57□□□□□ -0.88
GNPTAB-207ENST00000550352 AGBL1Q96MI9 1066 aa9.57□□□□□ -0.88
GNPTAB-207ENST00000550352 ADH1AP07327 375 aa9.56□□□□□ -0.88
GNPTAB-207ENST00000550352 SIRT1Q96EB6 747 aa9.56□□□□□ -0.88
GNPTAB-207ENST00000550352 DACH1Q9UI36 760 aa9.56□□□□□ -0.88
GNPTAB-207ENST00000550352 NOD1Q9Y239 953 aa9.56□□□□□ -0.88
GNPTAB-207ENST00000550352 KDF1Q8NAX2 398 aaPredicted RBP9.55□□□□□ -0.88
GNPTAB-207ENST00000550352 MKRN1Q9UHC7 482 aaKnown RBP9.55□□□□□ -0.88
GNPTAB-207ENST00000550352 ATP5J2-PTCD1G3V325 749 aa9.54□□□□□ -0.88
GNPTAB-207ENST00000550352 RELBQ01201 579 aa9.54□□□□□ -0.88
GNPTAB-207ENST00000550352 CYP2U1Q7Z449 544 aa9.54□□□□□ -0.88
GNPTAB-207ENST00000550352 TRIM46Q7Z4K8 759 aa9.54□□□□□ -0.88
GNPTAB-207ENST00000550352 STAU1O95793 577 aaKnown RBP9.53□□□□□ -0.88
GNPTAB-207ENST00000550352 GTF2IP78347 998 aa9.53□□□□□ -0.88
GNPTAB-207ENST00000550352 CDCA8Q53HL2 280 aa9.53□□□□□ -0.88
GNPTAB-207ENST00000550352 KANK4Q5T7N3 995 aaPredicted RBP9.53□□□□□ -0.88
GNPTAB-207ENST00000550352 MRPL14Q6P1L8 145 aaKnown RBP9.53□□□□□ -0.88
GNPTAB-207ENST00000550352 LINC00528Q8N1L1 170 aa9.53□□□□□ -0.88
GNPTAB-207ENST00000550352 PCDHGA11Q9Y5H2 935 aa9.53□□□□□ -0.88
GNPTAB-207ENST00000550352 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.52□□□□□ -0.89
GNPTAB-207ENST00000550352 PTGIRP43119 386 aa9.52□□□□□ -0.89
GNPTAB-207ENST00000550352 C6orf118Q5T5N4 469 aa9.52□□□□□ -0.89
GNPTAB-207ENST00000550352 PURBQ96QR8 312 aaKnown RBP9.52□□□□□ -0.89
GNPTAB-207ENST00000550352 TSEN34Q9BSV6 310 aaKnown RBP9.52□□□□□ -0.89
GNPTAB-207ENST00000550352 ZNF395Q9H8N7 513 aaPredicted RBP9.52□□□□□ -0.89
GNPTAB-207ENST00000550352 VRTNQ9H8Y1 702 aa9.52□□□□□ -0.89
GNPTAB-207ENST00000550352 ATP13A2Q9NQ11 1180 aa9.52□□□□□ -0.89
GNPTAB-207ENST00000550352 UPP2O95045 317 aa9.51□□□□□ -0.89
GNPTAB-207ENST00000550352 CLDN10P78369 228 aa9.51□□□□□ -0.89
GNPTAB-207ENST00000550352 TRIM50Q86XT4 487 aa9.51□□□□□ -0.89
GNPTAB-207ENST00000550352 ARHGEF10LQ9HCE6 1279 aa9.51□□□□□ -0.89
GNPTAB-207ENST00000550352 RAB6BQ9NRW1 208 aa9.51□□□□□ -0.89
GNPTAB-207ENST00000550352 BMP2P12643 396 aa9.5□□□□□ -0.89
GNPTAB-207ENST00000550352 SRPK2P78362 688 aaKnown RBP9.5□□□□□ -0.89
GNPTAB-207ENST00000550352 OGFOD1Q8N543 542 aa9.5□□□□□ -0.89
GNPTAB-207ENST00000550352 KIAA1024Q9UPX6 916 aa9.5□□□□□ -0.89
GNPTAB-207ENST00000550352 A0A1W2PRU2 124 aa9.49□□□□□ -0.89
GNPTAB-207ENST00000550352 ZBTB7BO15156 539 aaPredicted RBP9.49□□□□□ -0.89
GNPTAB-207ENST00000550352 GNRH1P01148 92 aa9.49□□□□□ -0.89
GNPTAB-207ENST00000550352 RASA1P20936 1047 aa9.49□□□□□ -0.89
GNPTAB-207ENST00000550352 ATP1A2P50993 1020 aa9.49□□□□□ -0.89
GNPTAB-207ENST00000550352 PSME1Q06323 249 aa9.49□□□□□ -0.89
GNPTAB-207ENST00000550352 SCARF1Q14162 830 aa9.49□□□□□ -0.89
GNPTAB-207ENST00000550352 DNAAF2Q9NVR5 837 aaKnown RBP9.49□□□□□ -0.89
GNPTAB-207ENST00000550352 CRTC2Q53ET0 693 aaPredicted RBP9.48□□□□□ -0.89
GNPTAB-207ENST00000550352 PBXIP1Q96AQ6 731 aa9.48□□□□□ -0.89
GNPTAB-207ENST00000550352 ZNF594Q96JF6 807 aaPredicted RBP9.48□□□□□ -0.89
GNPTAB-207ENST00000550352 ZFP42Q96MM3 310 aa9.48□□□□□ -0.89
GNPTAB-207ENST00000550352 INSM2Q96T92 566 aaPredicted RBP9.48□□□□□ -0.89
GNPTAB-207ENST00000550352 ETNK1Q9HBU6 452 aa9.48□□□□□ -0.89
GNPTAB-207ENST00000550352 MEN1O00255 615 aa9.47□□□□□ -0.89
GNPTAB-207ENST00000550352 SPINT1O43278 529 aa9.47□□□□□ -0.89
GNPTAB-207ENST00000550352 SCNN1DP51172 638 aa9.47□□□□□ -0.89
GNPTAB-207ENST00000550352 LARP1Q6PKG0 1096 aaKnown RBP9.47□□□□□ -0.89
GNPTAB-207ENST00000550352 TMEM229AB2RXF0 380 aa9.46□□□□□ -0.9
GNPTAB-207ENST00000550352 USP17L15C9J2P7 530 aa9.46□□□□□ -0.9
GNPTAB-207ENST00000550352 USP17L10C9JJH3 530 aa9.46□□□□□ -0.9
GNPTAB-207ENST00000550352 USP17L13C9JLJ4 530 aa9.46□□□□□ -0.9
GNPTAB-207ENST00000550352 USP17L12C9JPN9 530 aa9.46□□□□□ -0.9
GNPTAB-207ENST00000550352 USP17L11C9JVI0 530 aa9.46□□□□□ -0.9
GNPTAB-207ENST00000550352 USP17L21D6R901 530 aa9.46□□□□□ -0.9
GNPTAB-207ENST00000550352 USP17L18D6R9N7 530 aa9.46□□□□□ -0.9
GNPTAB-207ENST00000550352 USP17L22D6RA61 530 aa9.46□□□□□ -0.9
GNPTAB-207ENST00000550352 USP17L17D6RBQ6 530 aa9.46□□□□□ -0.9
GNPTAB-207ENST00000550352 USP17L19D6RCP7 530 aa9.46□□□□□ -0.9
GNPTAB-207ENST00000550352 USP17L20D6RJB6 530 aa9.46□□□□□ -0.9
GNPTAB-207ENST00000550352 IL2RAP01589 272 aa9.46□□□□□ -0.9
GNPTAB-207ENST00000550352 GDF10P55107 478 aa9.46□□□□□ -0.9
GNPTAB-207ENST00000550352 USP17L24Q0WX57 530 aa9.46□□□□□ -0.9
GNPTAB-207ENST00000550352 LARGE2Q8N3Y3 721 aa9.46□□□□□ -0.9
GNPTAB-207ENST00000550352 CTSOP43234 321 aaPredicted RBP9.45□□□□□ -0.9
GNPTAB-207ENST00000550352 CLN3Q13286 438 aa9.45□□□□□ -0.9
GNPTAB-207ENST00000550352 PTK7Q13308 1070 aa9.45□□□□□ -0.9
GNPTAB-207ENST00000550352 CCDC102BQ68D86 513 aa9.45□□□□□ -0.9
GNPTAB-207ENST00000550352 TPCN2Q8NHX9 752 aa9.45□□□□□ -0.9
GNPTAB-207ENST00000550352 POLMQ9NP87 494 aaPredicted RBP9.45□□□□□ -0.9
GNPTAB-207ENST00000550352 GMPR2Q9P2T1 348 aaKnown RBP9.45□□□□□ -0.9
GNPTAB-207ENST00000550352 FAM196BA6NMK8 535 aa9.44□□□□□ -0.9
GNPTAB-207ENST00000550352 DKK1O94907 266 aa9.44□□□□□ -0.9
GNPTAB-207ENST00000550352 INHAP05111 366 aa9.44□□□□□ -0.9
GNPTAB-207ENST00000550352 ESCO1Q5FWF5 840 aa9.44□□□□□ -0.9
GNPTAB-207ENST00000550352 SIX5Q8N196 739 aa9.44□□□□□ -0.9
GNPTAB-207ENST00000550352 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.44□□□□□ -0.9
GNPTAB-207ENST00000550352 CNKSR1Q969H4 720 aa9.44□□□□□ -0.9
GNPTAB-207ENST00000550352 NLRP3Q96P20 1036 aa9.44□□□□□ -0.9
GNPTAB-207ENST00000550352 SERTAD1Q9UHV2 236 aa9.44□□□□□ -0.9
GNPTAB-207ENST00000550352 XAGE2Q96GT9 111 aa9.43□□□□□ -0.9
GNPTAB-207ENST00000550352 ESYT1Q9BSJ8 1104 aa9.43□□□□□ -0.9
GNPTAB-207ENST00000550352 ZNF358Q9NW07 568 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms