RNA–Protein interactions for RNA: ENST00000550285.5

PDE1B-206, Transcript of phosphodiesterase 1B, human

TSL 2

Gene PDE1B, Length 2,209 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PDE1B-206	ENST00000550285	CFAP44	Q96MT7	982 aa		18.85	■□□□□ 0.61
PDE1B-206	ENST00000550285	CALD1	Q05682	793 aa	Known RBP	18.84	■□□□□ 0.61
PDE1B-206	ENST00000550285	PHLPP1	O60346	1717 aa		18.84	■□□□□ 0.61
PDE1B-206	ENST00000550285	GNAT3	A8MTJ3	354 aa		18.84	■□□□□ 0.61
PDE1B-206	ENST00000550285	MIS18A	Q9NYP9	233 aa		18.84	■□□□□ 0.61
PDE1B-206	ENST00000550285	CRB1	P82279	1406 aa		18.83	■□□□□ 0.61
PDE1B-206	ENST00000550285	RTF1	Q92541	710 aa	Known RBP	18.83	■□□□□ 0.6
PDE1B-206	ENST00000550285	FAM208A	Q9UK61	1670 aa	Known RBP	18.83	■□□□□ 0.6
PDE1B-206	ENST00000550285	TSPYL6	Q8N831	410 aa		18.82	■□□□□ 0.6
PDE1B-206	ENST00000550285	IL17RE	Q8NFR9	667 aa		18.82	■□□□□ 0.6
PDE1B-206	ENST00000550285	EXOC6	Q8TAG9	804 aa		18.82	■□□□□ 0.6
PDE1B-206	ENST00000550285	ELL2	O00472	640 aa	Predicted RBP	18.82	■□□□□ 0.6
PDE1B-206	ENST00000550285	COL16A1	Q07092	1604 aa	Predicted RBP	18.82	■□□□□ 0.6
PDE1B-206	ENST00000550285	MAP3K5	Q99683	1374 aa		18.82	■□□□□ 0.6
PDE1B-206	ENST00000550285	ABCC6	O95255	1503 aa		18.81	■□□□□ 0.6
PDE1B-206	ENST00000550285	KRT24	Q2M2I5	525 aa		18.8	■□□□□ 0.6
PDE1B-206	ENST00000550285	PLEKHO1	Q53GL0	409 aa	Predicted RBP	18.8	■□□□□ 0.6
PDE1B-206	ENST00000550285	ZNF530	Q6P9A1	599 aa	Predicted RBP	18.8	■□□□□ 0.6
PDE1B-206	ENST00000550285	C8orf58	Q8NAV2	365 aa		18.8	■□□□□ 0.6
PDE1B-206	ENST00000550285	CHL1	O00533	1208 aa		18.8	■□□□□ 0.6
PDE1B-206	ENST00000550285	LGR6	Q9HBX8	967 aa		18.8	■□□□□ 0.6
PDE1B-206	ENST00000550285	STRN4	Q9NRL3	753 aa		18.8	■□□□□ 0.6
PDE1B-206	ENST00000550285	COL5A2	P05997	1499 aa	Predicted RBP	18.79	■□□□□ 0.6
PDE1B-206	ENST00000550285	MEGF6	O75095	1541 aa		18.79	■□□□□ 0.6
PDE1B-206	ENST00000550285	ERICH6B	Q5W0A0	696 aa		18.79	■□□□□ 0.6
PDE1B-206	ENST00000550285	CRBN	Q96SW2	442 aa		18.79	■□□□□ 0.6
PDE1B-206	ENST00000550285	FRAT1	Q92837	279 aa	Predicted RBP	18.78	■□□□□ 0.6
PDE1B-206	ENST00000550285	TNN	Q9UQP3	1299 aa		18.78	■□□□□ 0.6
PDE1B-206	ENST00000550285	COL22A1	Q8NFW1	1626 aa	Predicted RBP	18.78	■□□□□ 0.6
PDE1B-206	ENST00000550285	HTATSF1	O43719	755 aa	Known RBP	18.78	■□□□□ 0.6
PDE1B-206	ENST00000550285	SSH1	Q8WYL5	1049 aa		18.78	■□□□□ 0.6
PDE1B-206	ENST00000550285	PPP4R2	Q9NY27	417 aa		18.78	■□□□□ 0.6
PDE1B-206	ENST00000550285	WDR17	Q8IZU2	1322 aa		18.78	■□□□□ 0.6
PDE1B-206	ENST00000550285	B4GALNT3	Q6L9W6	998 aa		18.77	■□□□□ 0.6
PDE1B-206	ENST00000550285	LARP1	Q6PKG0	1096 aa	Known RBP	18.77	■□□□□ 0.6
PDE1B-206	ENST00000550285	TOM1L2	Q6ZVM7	507 aa		18.77	■□□□□ 0.6
PDE1B-206	ENST00000550285	RAPGEF4	Q8WZA2	1011 aa		18.77	■□□□□ 0.6
PDE1B-206	ENST00000550285	VAMP4	O75379	141 aa		18.77	■□□□□ 0.59
PDE1B-206	ENST00000550285	AMOT	Q4VCS5	1084 aa		18.77	■□□□□ 0.59
PDE1B-206	ENST00000550285	MPRIP	Q6WCQ1	1025 aa		18.77	■□□□□ 0.59
PDE1B-206	ENST00000550285	CERK	Q8TCT0	537 aa		18.76	■□□□□ 0.59
PDE1B-206	ENST00000550285	BTG4	Q9NY30	223 aa		18.76	■□□□□ 0.59
PDE1B-206	ENST00000550285	LRRC37A3	O60309	1634 aa		18.76	■□□□□ 0.59
PDE1B-206	ENST00000550285	TCERG1	O14776	1098 aa	Known RBP	18.76	■□□□□ 0.59
PDE1B-206	ENST00000550285	CT47B1	P0C2W7	299 aa	Predicted RBP	18.76	■□□□□ 0.59
PDE1B-206	ENST00000550285	TAT	P17735	454 aa	Predicted RBP	18.75	■□□□□ 0.59
PDE1B-206	ENST00000550285	EVA1C	P58658	441 aa		18.75	■□□□□ 0.59
PDE1B-206	ENST00000550285	AKAP4	Q5JQC9	854 aa		18.75	■□□□□ 0.59
PDE1B-206	ENST00000550285	GOLGA6L2	Q8N9W4	650 aa	Predicted RBP	18.75	■□□□□ 0.59
PDE1B-206	ENST00000550285	SMC4	Q9NTJ3	1288 aa		18.75	■□□□□ 0.59
PDE1B-206	ENST00000550285	ADAMTS2	O95450	1211 aa		18.74	■□□□□ 0.59
PDE1B-206	ENST00000550285	TWISTNB	Q3B726	338 aa	Predicted RBP	18.74	■□□□□ 0.59
PDE1B-206	ENST00000550285	TSPYL4	Q9UJ04	414 aa		18.74	■□□□□ 0.59
PDE1B-206	ENST00000550285	NUTM2B	A6NNL0	878 aa	Predicted RBP	18.73	■□□□□ 0.59
PDE1B-206	ENST00000550285	NUTM2E	B1AL46	878 aa	Predicted RBP	18.73	■□□□□ 0.59
PDE1B-206	ENST00000550285	NUTM2A	Q8IVF1	878 aa	Predicted RBP	18.73	■□□□□ 0.59
PDE1B-206	ENST00000550285	CEMIP	Q8WUJ3	1361 aa		18.73	■□□□□ 0.59
PDE1B-206	ENST00000550285	CANX	P27824	592 aa	Known RBP	18.73	■□□□□ 0.59
PDE1B-206	ENST00000550285	C1orf141	Q5JVX7	400 aa		18.73	■□□□□ 0.59
PDE1B-206	ENST00000550285	PANK1	Q8TE04	598 aa		18.73	■□□□□ 0.59
PDE1B-206	ENST00000550285	USP35	Q9P2H5	1018 aa		18.73	■□□□□ 0.59
PDE1B-206	ENST00000550285	VIRMA	Q69YN4	1812 aa	Known RBP	18.72	■□□□□ 0.59
PDE1B-206	ENST00000550285	RNMT	O43148	476 aa	Known RBP	18.71	■□□□□ 0.59
PDE1B-206	ENST00000550285	TAF7	Q15545	349 aa	Predicted RBP	18.71	■□□□□ 0.59
PDE1B-206	ENST00000550285	CLUAP1	Q96AJ1	413 aa		18.71	■□□□□ 0.59
PDE1B-206	ENST00000550285	RLBP1	P12271	317 aa		18.7	■□□□□ 0.58
PDE1B-206	ENST00000550285	CARD10	Q9BWT7	1032 aa		18.7	■□□□□ 0.58
PDE1B-206	ENST00000550285	COL14A1	Q05707	1796 aa	Known RBP	18.7	■□□□□ 0.58
PDE1B-206	ENST00000550285	CYP27B1	O15528	508 aa		18.69	■□□□□ 0.58
PDE1B-206	ENST00000550285	NOB1	Q9ULX3	412 aa	Known RBP	18.69	■□□□□ 0.58
PDE1B-206	ENST00000550285	SPG7	Q9UQ90	795 aa		18.69	■□□□□ 0.58
PDE1B-206	ENST00000550285	PHKG2	P15735	406 aa		18.69	■□□□□ 0.58
PDE1B-206	ENST00000550285	KCNQ3	O43525	872 aa		18.68	■□□□□ 0.58
PDE1B-206	ENST00000550285	ALDH1L2	Q3SY69	923 aa		18.68	■□□□□ 0.58
PDE1B-206	ENST00000550285	MRPL50	Q8N5N7	158 aa	Known RBP	18.68	■□□□□ 0.58
PDE1B-206	ENST00000550285	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	18.68	■□□□□ 0.58
PDE1B-206	ENST00000550285	COG6	Q9Y2V7	657 aa		18.68	■□□□□ 0.58
PDE1B-206	ENST00000550285	OVOS2	A0A0G2JMS6	1433 aa		18.67	■□□□□ 0.58
PDE1B-206	ENST00000550285	PKD1L3	Q7Z443	1732 aa		18.67	■□□□□ 0.58
PDE1B-206	ENST00000550285	PDE3A	Q14432	1141 aa		18.67	■□□□□ 0.58
PDE1B-206	ENST00000550285	TEF	Q10587	303 aa		18.66	■□□□□ 0.58
PDE1B-206	ENST00000550285	ZKSCAN2	Q63HK3	967 aa		18.66	■□□□□ 0.58
PDE1B-206	ENST00000550285	CCDC136	Q96JN2	1154 aa		18.66	■□□□□ 0.58
PDE1B-206	ENST00000550285	KDM6A	O15550	1401 aa	Predicted RBP	18.66	■□□□□ 0.58
PDE1B-206	ENST00000550285	TRIM27	P14373	513 aa		18.66	■□□□□ 0.58
PDE1B-206	ENST00000550285	IL2RB	P14784	551 aa		18.65	■□□□□ 0.58
PDE1B-206	ENST00000550285	IFNL2	Q8IZJ0	200 aa		18.65	■□□□□ 0.58
PDE1B-206	ENST00000550285	ZNF428	Q96B54	188 aa		18.65	■□□□□ 0.58
PDE1B-206	ENST00000550285	PLCH1	Q4KWH8	1693 aa		18.65	■□□□□ 0.58
PDE1B-206	ENST00000550285	ZCRB1	Q8TBF4	217 aa	Known RBP	18.64	■□□□□ 0.57
PDE1B-206	ENST00000550285	PARP4	Q9UKK3	1724 aa	Known RBP	18.64	■□□□□ 0.57
PDE1B-206	ENST00000550285	ADAMTS7	Q9UKP4	1686 aa		18.64	■□□□□ 0.57
PDE1B-206	ENST00000550285	BTBD11	A6QL63	1104 aa		18.64	■□□□□ 0.57
PDE1B-206	ENST00000550285	SCN11A	Q9UI33	1791 aa		18.63	■□□□□ 0.57
PDE1B-206	ENST00000550285	ATF7IP	Q6VMQ6	1270 aa		18.63	■□□□□ 0.57
PDE1B-206	ENST00000550285	NECTIN2	Q92692	538 aa		18.62	■□□□□ 0.57
PDE1B-206	ENST00000550285	BABAM1	Q9NWV8	329 aa		18.62	■□□□□ 0.57
PDE1B-206	ENST00000550285	KDM3B	Q7LBC6	1761 aa		18.62	■□□□□ 0.57
PDE1B-206	ENST00000550285	BRPF1	P55201	1214 aa	Predicted RBP	18.62	■□□□□ 0.57
PDE1B-206	ENST00000550285	DZIP1L	Q8IYY4	767 aa	Known RBP	18.62	■□□□□ 0.57

Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms