RNA–Protein interactions for RNA: ENST00000550274.1

LETMD1-222, Transcript of LETM1 domain containing 1, humanhuman

TSL 2

Gene LETMD1, Length 809 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-222ENST00000550274 COG3Q96JB2 828 aa17.75■□□□□ 0.43
LETMD1-222ENST00000550274 AKT1S1Q96B36 256 aa17.74■□□□□ 0.43
LETMD1-222ENST00000550274 ARXQ96QS3 562 aa17.74■□□□□ 0.43
LETMD1-222ENST00000550274 NSD2O96028 1365 aa17.74■□□□□ 0.43
LETMD1-222ENST00000550274 ANKRD36BQ8N2N9 1353 aa17.74■□□□□ 0.43
LETMD1-222ENST00000550274 TAF1LQ8IZX4 1826 aa17.72■□□□□ 0.43
LETMD1-222ENST00000550274 MAP3K5Q99683 1374 aa17.72■□□□□ 0.43
LETMD1-222ENST00000550274 AMPHP49418 695 aa17.72■□□□□ 0.43
LETMD1-222ENST00000550274 KCNQ4P56696 695 aa17.72■□□□□ 0.43
LETMD1-222ENST00000550274 RTL1A6NKG5 1358 aa17.71■□□□□ 0.43
LETMD1-222ENST00000550274 ITGB4P16144 1822 aa17.71■□□□□ 0.43
LETMD1-222ENST00000550274 PRIM1P49642 420 aaKnown RBP17.71■□□□□ 0.43
LETMD1-222ENST00000550274 SLC27A3Q5K4L6 730 aa17.71■□□□□ 0.43
LETMD1-222ENST00000550274 SYTL4Q96C24 671 aaPredicted RBP17.71■□□□□ 0.43
LETMD1-222ENST00000550274 PNPLA7Q6ZV29 1317 aa17.71■□□□□ 0.42
LETMD1-222ENST00000550274 C5P01031 1676 aa17.71■□□□□ 0.42
LETMD1-222ENST00000550274 RRS1Q15050 365 aaKnown RBP17.7■□□□□ 0.42
LETMD1-222ENST00000550274 ZNF784Q8NCA9 323 aaPredicted RBP17.69■□□□□ 0.42
LETMD1-222ENST00000550274 ZCRB1Q8TBF4 217 aaKnown RBP17.69■□□□□ 0.42
LETMD1-222ENST00000550274 TOGARAM1Q9Y4F4 1720 aa17.69■□□□□ 0.42
LETMD1-222ENST00000550274 NBPF6Q5VWK0 638 aa17.68■□□□□ 0.42
LETMD1-222ENST00000550274 NBPF4Q96M43 638 aa17.68■□□□□ 0.42
LETMD1-222ENST00000550274 GGNBP2Q9H3C7 697 aa17.68■□□□□ 0.42
LETMD1-222ENST00000550274 USP47Q96K76 1375 aa17.67■□□□□ 0.42
LETMD1-222ENST00000550274 FYB1O15117 783 aa17.67■□□□□ 0.42
LETMD1-222ENST00000550274 USHBP1Q8N6Y0 703 aa17.67■□□□□ 0.42
LETMD1-222ENST00000550274 SLC16A10Q8TF71 515 aa17.67■□□□□ 0.42
LETMD1-222ENST00000550274 PKD1L3Q7Z443 1732 aa17.67■□□□□ 0.42
LETMD1-222ENST00000550274 ANKRD26Q9UPS8 1709 aa17.67■□□□□ 0.42
LETMD1-222ENST00000550274 MAP2P11137 1827 aaKnown RBP17.66■□□□□ 0.42
LETMD1-222ENST00000550274 SLC24A1O60721 1099 aa17.66■□□□□ 0.42
LETMD1-222ENST00000550274 TFCP2L1Q9NZI6 479 aa17.65■□□□□ 0.42
LETMD1-222ENST00000550274 SMG6Q86US8 1419 aaKnown RBP17.64■□□□□ 0.42
LETMD1-222ENST00000550274 TMF1P82094 1093 aa17.64■□□□□ 0.41
LETMD1-222ENST00000550274 KLHL34Q8N239 644 aa17.64■□□□□ 0.41
LETMD1-222ENST00000550274 CCNL1Q9UK58 526 aaPredicted RBP17.63■□□□□ 0.41
LETMD1-222ENST00000550274 POLD1P28340 1107 aa17.62■□□□□ 0.41
LETMD1-222ENST00000550274 NCBP3Q53F19 620 aaKnown RBP17.62■□□□□ 0.41
LETMD1-222ENST00000550274 HSP90AB2PQ58FF8 381 aa17.62■□□□□ 0.41
LETMD1-222ENST00000550274 CGNL1Q0VF96 1302 aa17.62■□□□□ 0.41
LETMD1-222ENST00000550274 INSRP06213 1382 aa17.62■□□□□ 0.41
LETMD1-222ENST00000550274 UBR3Q6ZT12 1888 aa17.61■□□□□ 0.41
LETMD1-222ENST00000550274 RAPGEF4Q8WZA2 1011 aa17.61■□□□□ 0.41
LETMD1-222ENST00000550274 FLT4P35916 1363 aa17.61■□□□□ 0.41
LETMD1-222ENST00000550274 GPR162Q16538 588 aa17.6■□□□□ 0.41
LETMD1-222ENST00000550274 NLGN2Q8NFZ4 835 aa17.6■□□□□ 0.41
LETMD1-222ENST00000550274 C4BP0C0L5 1744 aa17.6■□□□□ 0.41
LETMD1-222ENST00000550274 TATP17735 454 aaPredicted RBP17.59■□□□□ 0.41
LETMD1-222ENST00000550274 COL23A1Q86Y22 540 aaPredicted RBP17.59■□□□□ 0.41
LETMD1-222ENST00000550274 KIF24Q5T7B8 1368 aa17.58■□□□□ 0.4
LETMD1-222ENST00000550274 PCDH11XQ9BZA7 1347 aa17.58■□□□□ 0.4
LETMD1-222ENST00000550274 PCDH11YQ9BZA8 1340 aa17.58■□□□□ 0.4
LETMD1-222ENST00000550274 CARD14Q9BXL6 1004 aa17.58■□□□□ 0.4
LETMD1-222ENST00000550274 NSD3Q9BZ95 1437 aa17.57■□□□□ 0.4
LETMD1-222ENST00000550274 PELP1Q8IZL8 1130 aaKnown RBP17.57■□□□□ 0.4
LETMD1-222ENST00000550274 NCAPD2Q15021 1401 aa17.56■□□□□ 0.4
LETMD1-222ENST00000550274 PALLDQ8WX93 1383 aa17.56■□□□□ 0.4
LETMD1-222ENST00000550274 CYP27B1O15528 508 aa17.56■□□□□ 0.4
LETMD1-222ENST00000550274 EMILIN1Q9Y6C2 1016 aa17.56■□□□□ 0.4
LETMD1-222ENST00000550274 CDCA8Q53HL2 280 aa17.55■□□□□ 0.4
LETMD1-222ENST00000550274 MSL1Q68DK7 614 aa17.55■□□□□ 0.4
LETMD1-222ENST00000550274 MPRIPQ6WCQ1 1025 aa17.54■□□□□ 0.4
LETMD1-222ENST00000550274 YBX3P16989 372 aaKnown RBP eCLIP17.52■□□□□ 0.45e-13■■□□□ 14.4
LETMD1-222ENST00000550274 C1QTNF8P60827 252 aa17.51■□□□□ 0.39
LETMD1-222ENST00000550274 AMIGO3Q86WK7 504 aa17.51■□□□□ 0.39
LETMD1-222ENST00000550274 CEP350Q5VT06 3117 aa17.5■□□□□ 0.39
LETMD1-222ENST00000550274 PPM1GO15355 546 aaPredicted RBP17.5■□□□□ 0.39
LETMD1-222ENST00000550274 TRIM26Q12899 539 aaPredicted RBP17.5■□□□□ 0.39
LETMD1-222ENST00000550274 SENP3-EIF4A1A0A087X0R7 540 aa17.49■□□□□ 0.39
LETMD1-222ENST00000550274 SMIM5Q71RC9 77 aa17.48■□□□□ 0.39
LETMD1-222ENST00000550274 PIGBQ92521 554 aa17.48■□□□□ 0.39
LETMD1-222ENST00000550274 WASHC2AQ641Q2 1341 aa17.47■□□□□ 0.39
LETMD1-222ENST00000550274 NKX1-1Q15270 411 aaPredicted RBP17.47■□□□□ 0.39
LETMD1-222ENST00000550274 FLAD1Q8NFF5 587 aa17.47■□□□□ 0.39
LETMD1-222ENST00000550274 SMARCC1Q92922 1105 aaPredicted RBP17.47■□□□□ 0.39
LETMD1-222ENST00000550274 EYA1Q99502 592 aa17.47■□□□□ 0.39
LETMD1-222ENST00000550274 AK7Q96M32 723 aa17.46■□□□□ 0.39
LETMD1-222ENST00000550274 COL5A3P25940 1745 aaPredicted RBP17.45■□□□□ 0.38
LETMD1-222ENST00000550274 GRIN3BO60391 1043 aa17.45■□□□□ 0.38
LETMD1-222ENST00000550274 GIGYF1O75420 1035 aaPredicted RBP17.45■□□□□ 0.38
LETMD1-222ENST00000550274 POLKQ9UBT6 870 aa17.45■□□□□ 0.38
LETMD1-222ENST00000550274 SPG7Q9UQ90 795 aa17.45■□□□□ 0.38
LETMD1-222ENST00000550274 CD2APQ9Y5K6 639 aa17.45■□□□□ 0.38
LETMD1-222ENST00000550274 KIF13BQ9NQT8 1826 aa17.44■□□□□ 0.38
LETMD1-222ENST00000550274 PHF14O94880 888 aa17.44■□□□□ 0.38
LETMD1-222ENST00000550274 LINC00116Q8NCU8 138 aa17.44■□□□□ 0.38
LETMD1-222ENST00000550274 ZNF831Q5JPB2 1677 aa17.44■□□□□ 0.38
LETMD1-222ENST00000550274 KIAA1551Q9HCM1 1747 aa17.44■□□□□ 0.38
LETMD1-222ENST00000550274 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.43■□□□□ 0.38
LETMD1-222ENST00000550274 LOC102724428A0A0B4J2F2 783 aa17.43■□□□□ 0.38
LETMD1-222ENST00000550274 HMGB2P26583 209 aaKnown RBP17.43■□□□□ 0.38
LETMD1-222ENST00000550274 SIK1P57059 783 aa17.43■□□□□ 0.38
LETMD1-222ENST00000550274 CNKSR2Q8WXI2 1034 aa17.43■□□□□ 0.38
LETMD1-222ENST00000550274 PHKG2P15735 406 aa17.42■□□□□ 0.38
LETMD1-222ENST00000550274 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.42■□□□□ 0.38
LETMD1-222ENST00000550274 TMOD3Q9NYL9 352 aa17.42■□□□□ 0.38
LETMD1-222ENST00000550274 ASAP1Q9ULH1 1129 aa17.42■□□□□ 0.38
LETMD1-222ENST00000550274 N4BP2Q86UW6 1770 aaPredicted RBP17.42■□□□□ 0.38
LETMD1-222ENST00000550274 ATP10DQ9P241 1426 aa17.41■□□□□ 0.38
LETMD1-222ENST00000550274 MYH14Q7Z406 1995 aaKnown RBP17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms