RNA–Protein interactions for RNA: ENST00000550254.1

TUBA1A-206, Transcript of tubulin alpha 1a, humanhuman

TSL 2

Gene TUBA1A, Length 696 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1A-206ENST00000550254 KCNQ2O43526 872 aa24.58■■□□□ 1.53
TUBA1A-206ENST00000550254 DDX54Q8TDD1 881 aaKnown RBP24.58■■□□□ 1.53
TUBA1A-206ENST00000550254 ZCRB1Q8TBF4 217 aaKnown RBP24.57■■□□□ 1.52
TUBA1A-206ENST00000550254 PLSCR1O15162 318 aa24.56■■□□□ 1.52
TUBA1A-206ENST00000550254 ACSBG1Q96GR2 724 aa24.56■■□□□ 1.52
TUBA1A-206ENST00000550254 EYA1Q99502 592 aa24.56■■□□□ 1.52
TUBA1A-206ENST00000550254 EIF4A2Q14240 407 aaKnown RBP24.55■■□□□ 1.52
TUBA1A-206ENST00000550254 RAPGEF4Q8WZA2 1011 aa24.55■■□□□ 1.52
TUBA1A-206ENST00000550254 TATP17735 454 aaPredicted RBP24.54■■□□□ 1.52
TUBA1A-206ENST00000550254 BTAF1O14981 1849 aa24.51■■□□□ 1.51
TUBA1A-206ENST00000550254 PSDA5PKW4 1024 aaPredicted RBP24.51■■□□□ 1.51
TUBA1A-206ENST00000550254 CC2D1BQ5T0F9 858 aaKnown RBP24.51■■□□□ 1.51
TUBA1A-206ENST00000550254 PKD1L3Q7Z443 1732 aa24.51■■□□□ 1.51
TUBA1A-206ENST00000550254 DOT1LQ8TEK3 1739 aa24.51■■□□□ 1.51
TUBA1A-206ENST00000550254 PROM2Q8N271 834 aa24.5■■□□□ 1.51
TUBA1A-206ENST00000550254 KAT6BQ8WYB5 2073 aa24.49■■□□□ 1.51
TUBA1A-206ENST00000550254 NPC1L1Q9UHC9 1359 aa24.49■■□□□ 1.51
TUBA1A-206ENST00000550254 R3HDM1Q15032 1099 aaKnown RBP24.47■■□□□ 1.51
TUBA1A-206ENST00000550254 IGSF1Q8N6C5 1336 aa24.46■■□□□ 1.51
TUBA1A-206ENST00000550254 PCDH11XQ9BZA7 1347 aa24.45■■□□□ 1.5
TUBA1A-206ENST00000550254 PCDH11YQ9BZA8 1340 aa24.45■■□□□ 1.5
TUBA1A-206ENST00000550254 CYP27B1O15528 508 aa24.45■■□□□ 1.5
TUBA1A-206ENST00000550254 PRIM1P49642 420 aaKnown RBP24.44■■□□□ 1.5
TUBA1A-206ENST00000550254 TXNRD1Q16881 649 aa24.44■■□□□ 1.5
TUBA1A-206ENST00000550254 MTHFSP49914 203 aa24.43■■□□□ 1.5
TUBA1A-206ENST00000550254 CNGB1Q14028 1251 aaPredicted RBP24.43■■□□□ 1.5
TUBA1A-206ENST00000550254 NBPF14Q5TI25 921 aa24.43■■□□□ 1.5
TUBA1A-206ENST00000550254 IL13P35225 146 aa24.41■■□□□ 1.5
TUBA1A-206ENST00000550254 TOGARAM1Q9Y4F4 1720 aa24.41■■□□□ 1.5
TUBA1A-206ENST00000550254 SYTL4Q96C24 671 aaPredicted RBP24.4■■□□□ 1.5
TUBA1A-206ENST00000550254 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.4■■□□□ 1.5
TUBA1A-206ENST00000550254 SPG7Q9UQ90 795 aa24.4■■□□□ 1.5
TUBA1A-206ENST00000550254 ANO8Q9HCE9 1232 aaPredicted RBP24.39■■□□□ 1.49
TUBA1A-206ENST00000550254 ITGB4P16144 1822 aa24.38■■□□□ 1.49
TUBA1A-206ENST00000550254 NKX1-1Q15270 411 aaPredicted RBP24.37■■□□□ 1.49
TUBA1A-206ENST00000550254 AEBP1Q8IUX7 1158 aa24.37■■□□□ 1.49
TUBA1A-206ENST00000550254 PLEKHG2Q9H7P9 1386 aa24.37■■□□□ 1.49
TUBA1A-206ENST00000550254 LY75O60449 1722 aa24.36■■□□□ 1.49
TUBA1A-206ENST00000550254 LRP5O75197 1615 aa24.35■■□□□ 1.49
TUBA1A-206ENST00000550254 PAPPAQ13219 1627 aa24.35■■□□□ 1.49
TUBA1A-206ENST00000550254 KDRP35968 1356 aa24.34■■□□□ 1.49
TUBA1A-206ENST00000550254 PHKG2P15735 406 aa24.34■■□□□ 1.49
TUBA1A-206ENST00000550254 SULT6B1Q6IMI4 303 aa24.34■■□□□ 1.49
TUBA1A-206ENST00000550254 LRRC4BQ9NT99 713 aa24.34■■□□□ 1.49
TUBA1A-206ENST00000550254 COL3A1P02461 1466 aaPredicted RBP24.33■■□□□ 1.49
TUBA1A-206ENST00000550254 IFNL2Q8IZJ0 200 aa24.33■■□□□ 1.49
TUBA1A-206ENST00000550254 SRCAPQ6ZRS2 3230 aa24.31■■□□□ 1.48
TUBA1A-206ENST00000550254 CASZ1Q86V15 1759 aa24.3■■□□□ 1.48
TUBA1A-206ENST00000550254 DIAPH1O60610 1272 aaKnown RBP24.3■■□□□ 1.48
TUBA1A-206ENST00000550254 PLEKHO1Q53GL0 409 aaPredicted RBP24.3■■□□□ 1.48
TUBA1A-206ENST00000550254 MPRIPQ6WCQ1 1025 aa24.3■■□□□ 1.48
TUBA1A-206ENST00000550254 SLC15A2Q16348 729 aa24.29■■□□□ 1.48
TUBA1A-206ENST00000550254 STK32BQ9NY57 414 aa24.29■■□□□ 1.48
TUBA1A-206ENST00000550254 KCNQ4P56696 695 aa24.28■■□□□ 1.48
TUBA1A-206ENST00000550254 AMOTQ4VCS5 1084 aa24.28■■□□□ 1.48
TUBA1A-206ENST00000550254 SLC27A3Q5K4L6 730 aa24.28■■□□□ 1.48
TUBA1A-206ENST00000550254 PIGBQ92521 554 aa24.27■■□□□ 1.48
TUBA1A-206ENST00000550254 PDGFDQ9GZP0 370 aaPredicted RBP24.27■■□□□ 1.48
TUBA1A-206ENST00000550254 HMOX1P09601 288 aa24.26■■□□□ 1.47
TUBA1A-206ENST00000550254 PPP2R1AP30153 589 aa24.26■■□□□ 1.47
TUBA1A-206ENST00000550254 ZNF827Q17R98 1081 aa24.25■■□□□ 1.47
TUBA1A-206ENST00000550254 ZNF530Q6P9A1 599 aaPredicted RBP24.25■■□□□ 1.47
TUBA1A-206ENST00000550254 AKT1S1Q96B36 256 aa24.23■■□□□ 1.47
TUBA1A-206ENST00000550254 CCNL1Q9UK58 526 aaPredicted RBP24.23■■□□□ 1.47
TUBA1A-206ENST00000550254 PALLDQ8WX93 1383 aa24.23■■□□□ 1.47
TUBA1A-206ENST00000550254 KDM6AO15550 1401 aaPredicted RBP24.22■■□□□ 1.47
TUBA1A-206ENST00000550254 HSP90AB1P08238 724 aaKnown RBP24.21■■□□□ 1.47
TUBA1A-206ENST00000550254 DCAF5Q96JK2 942 aa24.21■■□□□ 1.47
TUBA1A-206ENST00000550254 TMOD3Q9NYL9 352 aa24.21■■□□□ 1.47
TUBA1A-206ENST00000550254 TAF1LQ8IZX4 1826 aa24.21■■□□□ 1.47
TUBA1A-206ENST00000550254 TUBGCP6Q96RT7 1819 aa24.21■■□□□ 1.47
TUBA1A-206ENST00000550254 QSER1Q2KHR3 1735 aa24.21■■□□□ 1.47
TUBA1A-206ENST00000550254 C5P01031 1676 aa24.2■■□□□ 1.46
TUBA1A-206ENST00000550254 ERVV-2B6SEH9 535 aa24.19■■□□□ 1.46
TUBA1A-206ENST00000550254 U2SURPO15042 1029 aaKnown RBP24.19■■□□□ 1.46
TUBA1A-206ENST00000550254 ZEB1P37275 1124 aaPredicted RBP24.19■■□□□ 1.46
TUBA1A-206ENST00000550254 DDX10Q13206 875 aaKnown RBP24.19■■□□□ 1.46
TUBA1A-206ENST00000550254 SMARCC1Q92922 1105 aaPredicted RBP24.19■■□□□ 1.46
TUBA1A-206ENST00000550254 SCN11AQ9UI33 1791 aa24.19■■□□□ 1.46
TUBA1A-206ENST00000550254 C1orf141Q5JVX7 400 aa24.18■■□□□ 1.46
TUBA1A-206ENST00000550254 CFAP53Q96M91 514 aa24.18■■□□□ 1.46
TUBA1A-206ENST00000550254 ASAP1Q9ULH1 1129 aa24.18■■□□□ 1.46
TUBA1A-206ENST00000550254 SPON1Q9HCB6 807 aa24.17■■□□□ 1.46
TUBA1A-206ENST00000550254 VIRMAQ69YN4 1812 aaKnown RBP24.17■■□□□ 1.46
TUBA1A-206ENST00000550254 MTHFSDQ2M296 383 aaKnown RBP24.16■■□□□ 1.46
TUBA1A-206ENST00000550254 AKAP4Q5JQC9 854 aa24.16■■□□□ 1.46
TUBA1A-206ENST00000550254 ATG3Q9NT62 314 aa24.16■■□□□ 1.46
TUBA1A-206ENST00000550254 ZBTB7AO95365 584 aa24.15■■□□□ 1.46
TUBA1A-206ENST00000550254 PNPLA7Q6ZV29 1317 aa24.13■■□□□ 1.45
TUBA1A-206ENST00000550254 CABP4P57796 275 aa24.13■■□□□ 1.45
TUBA1A-206ENST00000550254 ADAMTS7Q9UKP4 1686 aa24.12■■□□□ 1.45
TUBA1A-206ENST00000550254 TFCP2L1Q9NZI6 479 aa24.12■■□□□ 1.45
TUBA1A-206ENST00000550254 C4BP0C0L5 1744 aa24.12■■□□□ 1.45
TUBA1A-206ENST00000550254 LOC102724428A0A0B4J2F2 783 aa24.11■■□□□ 1.45
TUBA1A-206ENST00000550254 SIK1P57059 783 aa24.11■■□□□ 1.45
TUBA1A-206ENST00000550254 LGR6Q9HBX8 967 aa24.11■■□□□ 1.45
TUBA1A-206ENST00000550254 NUDCQ9Y266 331 aa24.11■■□□□ 1.45
TUBA1A-206ENST00000550254 ATF5Q9Y2D1 282 aaPredicted RBP24.11■■□□□ 1.45
TUBA1A-206ENST00000550254 NFATC2IPQ8NCF5 419 aa24.1■■□□□ 1.45
TUBA1A-206ENST00000550254 RSPH6AQ9H0K4 717 aa24.1■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms