RNA–Protein interactions for RNA: ENST00000550188.1

ARFGAP1-223, Transcript of ADP ribosylation factor GTPase activating protein 1, humanhuman

TSL 5

Gene ARFGAP1, Length 572 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGAP1-223ENST00000550188 PLSCR1O15162 318 aa16.22■□□□□ 0.19
ARFGAP1-223ENST00000550188 PTF1AQ7RTS3 328 aa16.22■□□□□ 0.19
ARFGAP1-223ENST00000550188 ACSBG1Q96GR2 724 aa16.22■□□□□ 0.19
ARFGAP1-223ENST00000550188 MAP2P11137 1827 aaKnown RBP16.22■□□□□ 0.19
ARFGAP1-223ENST00000550188 PCDH11XQ9BZA7 1347 aa16.21■□□□□ 0.19
ARFGAP1-223ENST00000550188 PCDH11YQ9BZA8 1340 aa16.21■□□□□ 0.19
ARFGAP1-223ENST00000550188 KCNQ2O43526 872 aa16.21■□□□□ 0.19
ARFGAP1-223ENST00000550188 IGSF1Q8N6C5 1336 aa16.2■□□□□ 0.18
ARFGAP1-223ENST00000550188 PLEKHG2Q9H7P9 1386 aa16.2■□□□□ 0.18
ARFGAP1-223ENST00000550188 NHSQ6T4R5 1651 aa16.2■□□□□ 0.18
ARFGAP1-223ENST00000550188 MTHFSP49914 203 aa16.19■□□□□ 0.18
ARFGAP1-223ENST00000550188 CNGB1Q14028 1251 aaPredicted RBP16.19■□□□□ 0.18
ARFGAP1-223ENST00000550188 SBF2Q86WG5 1849 aa16.18■□□□□ 0.18
ARFGAP1-223ENST00000550188 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.18■□□□□ 0.185e-35■□□□□ 9.7
ARFGAP1-223ENST00000550188 SPG7Q9UQ90 795 aa16.18■□□□□ 0.18
ARFGAP1-223ENST00000550188 RGPD3A6NKT7 1758 aaPredicted RBP16.18■□□□□ 0.18
ARFGAP1-223ENST00000550188 RGPD4Q7Z3J3 1758 aa16.18■□□□□ 0.18
ARFGAP1-223ENST00000550188 RREB1Q92766 1687 aa16.18■□□□□ 0.18
ARFGAP1-223ENST00000550188 SHANK3Q9BYB0 1731 aa16.16■□□□□ 0.18
ARFGAP1-223ENST00000550188 IL13P35225 146 aa16.16■□□□□ 0.18
ARFGAP1-223ENST00000550188 CYP27B1O15528 508 aa16.15■□□□□ 0.18
ARFGAP1-223ENST00000550188 PRIM1P49642 420 aaKnown RBP16.15■□□□□ 0.18
ARFGAP1-223ENST00000550188 NBPF14Q5TI25 921 aa16.15■□□□□ 0.18
ARFGAP1-223ENST00000550188 PKD1L3Q7Z443 1732 aa16.15■□□□□ 0.18
ARFGAP1-223ENST00000550188 SYTL4Q96C24 671 aaPredicted RBP16.15■□□□□ 0.18
ARFGAP1-223ENST00000550188 PSDA5PKW4 1024 aaPredicted RBP16.14■□□□□ 0.17
ARFGAP1-223ENST00000550188 R3HDM1Q15032 1099 aaKnown RBP16.14■□□□□ 0.17
ARFGAP1-223ENST00000550188 NUP188Q5SRE5 1749 aa16.14■□□□□ 0.17
ARFGAP1-223ENST00000550188 TXNRD1Q16881 649 aa16.13■□□□□ 0.17
ARFGAP1-223ENST00000550188 KDRP35968 1356 aa16.13■□□□□ 0.17
ARFGAP1-223ENST00000550188 DOT1LQ8TEK3 1739 aa16.12■□□□□ 0.17
ARFGAP1-223ENST00000550188 DIAPH1O60610 1272 aaKnown RBP16.12■□□□□ 0.17
ARFGAP1-223ENST00000550188 SULT6B1Q6IMI4 303 aa16.12■□□□□ 0.17
ARFGAP1-223ENST00000550188 AEBP1Q8IUX7 1158 aa16.12■□□□□ 0.17
ARFGAP1-223ENST00000550188 PROM2Q8N271 834 aa16.12■□□□□ 0.17
ARFGAP1-223ENST00000550188 PHKG2P15735 406 aa16.11■□□□□ 0.17
ARFGAP1-223ENST00000550188 NKX1-1Q15270 411 aaPredicted RBP16.11■□□□□ 0.17
ARFGAP1-223ENST00000550188 AMOTQ4VCS5 1084 aa16.11■□□□□ 0.17
ARFGAP1-223ENST00000550188 IFNL2Q8IZJ0 200 aa16.11■□□□□ 0.17
ARFGAP1-223ENST00000550188 PLEKHO1Q53GL0 409 aaPredicted RBP16.1■□□□□ 0.17
ARFGAP1-223ENST00000550188 BTAF1O14981 1849 aa16.1■□□□□ 0.17
ARFGAP1-223ENST00000550188 COL3A1P02461 1466 aaPredicted RBP16.1■□□□□ 0.17
ARFGAP1-223ENST00000550188 ZNF316A6NFI3 1004 aaPredicted RBP16.09■□□□□ 0.17
ARFGAP1-223ENST00000550188 CFAP53Q96M91 514 aa16.09■□□□□ 0.17
ARFGAP1-223ENST00000550188 PPP2R1AP30153 589 aa16.08■□□□□ 0.16
ARFGAP1-223ENST00000550188 SLC27A3Q5K4L6 730 aa16.08■□□□□ 0.16
ARFGAP1-223ENST00000550188 ANO8Q9HCE9 1232 aaPredicted RBP16.08■□□□□ 0.16
ARFGAP1-223ENST00000550188 HSP90AB1P08238 724 aaKnown RBP16.07■□□□□ 0.16
ARFGAP1-223ENST00000550188 ZNF530Q6P9A1 599 aaPredicted RBP16.07■□□□□ 0.16
ARFGAP1-223ENST00000550188 MPRIPQ6WCQ1 1025 aa16.07■□□□□ 0.16
ARFGAP1-223ENST00000550188 HMOX1P09601 288 aa16.06■□□□□ 0.16
ARFGAP1-223ENST00000550188 C1orf141Q5JVX7 400 aa16.06■□□□□ 0.16
ARFGAP1-223ENST00000550188 STK32BQ9NY57 414 aa16.06■□□□□ 0.16
ARFGAP1-223ENST00000550188 U2SURPO15042 1029 aaKnown RBP16.05■□□□□ 0.16
ARFGAP1-223ENST00000550188 DDX10Q13206 875 aaKnown RBP16.05■□□□□ 0.16
ARFGAP1-223ENST00000550188 DCAF5Q96JK2 942 aa16.05■□□□□ 0.16
ARFGAP1-223ENST00000550188 LRRC4BQ9NT99 713 aa16.05■□□□□ 0.16
ARFGAP1-223ENST00000550188 TMOD3Q9NYL9 352 aa16.05■□□□□ 0.16
ARFGAP1-223ENST00000550188 TOGARAM1Q9Y4F4 1720 aa16.05■□□□□ 0.16
ARFGAP1-223ENST00000550188 PALLDQ8WX93 1383 aa16.04■□□□□ 0.16
ARFGAP1-223ENST00000550188 SLC15A2Q16348 729 aa16.04■□□□□ 0.16
ARFGAP1-223ENST00000550188 PIGBQ92521 554 aa16.04■□□□□ 0.16
ARFGAP1-223ENST00000550188 PAPPAQ13219 1627 aa16.04■□□□□ 0.16
ARFGAP1-223ENST00000550188 SMARCC1Q92922 1105 aaPredicted RBP16.03■□□□□ 0.16
ARFGAP1-223ENST00000550188 CCNL1Q9UK58 526 aaPredicted RBP16.03■□□□□ 0.16
ARFGAP1-223ENST00000550188 NUDCQ9Y266 331 aa16.03■□□□□ 0.16
ARFGAP1-223ENST00000550188 LRP5O75197 1615 aa16.02■□□□□ 0.16
ARFGAP1-223ENST00000550188 ERVV-2B6SEH9 535 aa16.02■□□□□ 0.16
ARFGAP1-223ENST00000550188 KDM6AO15550 1401 aaPredicted RBP16.02■□□□□ 0.15
ARFGAP1-223ENST00000550188 AKAP4Q5JQC9 854 aa16.01■□□□□ 0.15
ARFGAP1-223ENST00000550188 HMGB2P26583 209 aaKnown RBP16■□□□□ 0.15
ARFGAP1-223ENST00000550188 KCNQ4P56696 695 aa16■□□□□ 0.15
ARFGAP1-223ENST00000550188 RALBP1Q15311 655 aa16■□□□□ 0.15
ARFGAP1-223ENST00000550188 CABP4P57796 275 aa15.99■□□□□ 0.15
ARFGAP1-223ENST00000550188 ZNF827Q17R98 1081 aa15.99■□□□□ 0.15
ARFGAP1-223ENST00000550188 AKT1S1Q96B36 256 aa15.99■□□□□ 0.15
ARFGAP1-223ENST00000550188 LY75O60449 1722 aa15.99■□□□□ 0.15
ARFGAP1-223ENST00000550188 MTHFSDQ2M296 383 aaKnown RBP15.98■□□□□ 0.15
ARFGAP1-223ENST00000550188 U2AF1L5P0DN76 240 aaPredicted RBP15.97■□□□□ 0.15
ARFGAP1-223ENST00000550188 U2AF1Q01081 240 aaKnown RBP eCLIP15.97■□□□□ 0.15
ARFGAP1-223ENST00000550188 RSPH6AQ9H0K4 717 aa15.97■□□□□ 0.15
ARFGAP1-223ENST00000550188 SPON1Q9HCB6 807 aa15.97■□□□□ 0.15
ARFGAP1-223ENST00000550188 ASAP1Q9ULH1 1129 aa15.97■□□□□ 0.15
ARFGAP1-223ENST00000550188 LOC102724428A0A0B4J2F2 783 aa15.96■□□□□ 0.15
ARFGAP1-223ENST00000550188 PRKAR2BP31323 418 aa15.96■□□□□ 0.15
ARFGAP1-223ENST00000550188 SIK1P57059 783 aa15.96■□□□□ 0.15
ARFGAP1-223ENST00000550188 GAS2L2Q8NHY3 880 aa15.96■□□□□ 0.15
ARFGAP1-223ENST00000550188 PDGFDQ9GZP0 370 aaPredicted RBP15.96■□□□□ 0.15
ARFGAP1-223ENST00000550188 ATG3Q9NT62 314 aa15.96■□□□□ 0.15
ARFGAP1-223ENST00000550188 TFCP2L1Q9NZI6 479 aa15.96■□□□□ 0.15
ARFGAP1-223ENST00000550188 ITGB4P16144 1822 aa15.96■□□□□ 0.14
ARFGAP1-223ENST00000550188 CASZ1Q86V15 1759 aa15.95■□□□□ 0.14
ARFGAP1-223ENST00000550188 FCHSD2O94868 740 aa15.95■□□□□ 0.14
ARFGAP1-223ENST00000550188 MYBBP1AQ9BQG0 1328 aaKnown RBP15.94■□□□□ 0.14
ARFGAP1-223ENST00000550188 NFATC2IPQ8NCF5 419 aa15.94■□□□□ 0.14
ARFGAP1-223ENST00000550188 MAP3K5Q99683 1374 aa15.94■□□□□ 0.14
ARFGAP1-223ENST00000550188 KAT6BQ8WYB5 2073 aa15.93■□□□□ 0.14
ARFGAP1-223ENST00000550188 MRC1P22897 1456 aa15.93■□□□□ 0.14
ARFGAP1-223ENST00000550188 RNMTO43148 476 aaKnown RBP15.93■□□□□ 0.14
ARFGAP1-223ENST00000550188 ZBTB7AO95365 584 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms