RNA–Protein interactions for RNA: ENST00000550104.5

ATXN2-219, Transcript of ataxin 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ATXN2, Length 4,648 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN2-219ENST00000550104 NUCB2P80303 420 aa20.56■□□□□ 0.88
ATXN2-219ENST00000550104 ZRSR1Q15695 479 aaKnown RBP20.56■□□□□ 0.88
ATXN2-219ENST00000550104 MAP4K4O95819 1239 aaPredicted RBP20.56■□□□□ 0.88
ATXN2-219ENST00000550104 FLIIQ13045 1269 aa20.56■□□□□ 0.88
ATXN2-219ENST00000550104 K7ELQ4 463 aaPredicted RBP20.55■□□□□ 0.88
ATXN2-219ENST00000550104 MTHFSDQ2M296 383 aaKnown RBP20.55■□□□□ 0.88
ATXN2-219ENST00000550104 MPRIPQ6WCQ1 1025 aa20.55■□□□□ 0.88
ATXN2-219ENST00000550104 HSP90B1P14625 803 aaKnown RBP20.55■□□□□ 0.88
ATXN2-219ENST00000550104 BMP2KLQ5H9B9 411 aa20.55■□□□□ 0.88
ATXN2-219ENST00000550104 MEIS3Q99687 375 aa20.55■□□□□ 0.88
ATXN2-219ENST00000550104 PTPRCP08575 1304 aa20.55■□□□□ 0.88
ATXN2-219ENST00000550104 MAP3K19Q56UN5 1328 aa20.55■□□□□ 0.88
ATXN2-219ENST00000550104 MSNP26038 577 aaKnown RBP20.55■□□□□ 0.88
ATXN2-219ENST00000550104 KCNA6P17658 529 aa20.54■□□□□ 0.88
ATXN2-219ENST00000550104 TATP17735 454 aaPredicted RBP20.54■□□□□ 0.88
ATXN2-219ENST00000550104 SYAP1Q96A49 352 aaPredicted RBP20.54■□□□□ 0.88
ATXN2-219ENST00000550104 TBC1D9Q6ZT07 1266 aa20.54■□□□□ 0.88
ATXN2-219ENST00000550104 PLEKHF1Q96S99 279 aa20.54■□□□□ 0.88
ATXN2-219ENST00000550104 METP08581 1390 aa20.53■□□□□ 0.88
ATXN2-219ENST00000550104 LTKP29376 864 aa20.53■□□□□ 0.88
ATXN2-219ENST00000550104 NPHP1O15259 732 aa20.53■□□□□ 0.88
ATXN2-219ENST00000550104 ZKSCAN1P17029 563 aaPredicted RBP20.53■□□□□ 0.88
ATXN2-219ENST00000550104 SMC5Q8IY18 1101 aa20.53■□□□□ 0.88
ATXN2-219ENST00000550104 MYL6BP14649 208 aa20.52■□□□□ 0.88
ATXN2-219ENST00000550104 CNTROBQ8N137 903 aa20.52■□□□□ 0.88
ATXN2-219ENST00000550104 MCM4P33991 863 aa20.52■□□□□ 0.87
ATXN2-219ENST00000550104 EYA1Q99502 592 aa20.52■□□□□ 0.87
ATXN2-219ENST00000550104 LRRFIP2Q9Y608 721 aaKnown RBP20.51■□□□□ 0.87
ATXN2-219ENST00000550104 TMEM2Q9UHN6 1383 aa20.51■□□□□ 0.87
ATXN2-219ENST00000550104 NUTM1Q86Y26 1132 aa20.5■□□□□ 0.87
ATXN2-219ENST00000550104 IL27Q8NEV9 243 aa20.5■□□□□ 0.87
ATXN2-219ENST00000550104 TBX22Q9Y458 520 aa20.5■□□□□ 0.87
ATXN2-219ENST00000550104 ABCA6Q8N139 1617 aa20.5■□□□□ 0.87
ATXN2-219ENST00000550104 SIL1Q9H173 461 aa20.49■□□□□ 0.87
ATXN2-219ENST00000550104 FLT4P35916 1363 aa20.49■□□□□ 0.87
ATXN2-219ENST00000550104 ZBTB7BO15156 539 aaPredicted RBP20.49■□□□□ 0.87
ATXN2-219ENST00000550104 POLR1AO95602 1720 aaPredicted RBP20.49■□□□□ 0.87
ATXN2-219ENST00000550104 NCBP3Q53F19 620 aaKnown RBP20.49■□□□□ 0.87
ATXN2-219ENST00000550104 ANXA1P04083 346 aa20.48■□□□□ 0.87
ATXN2-219ENST00000550104 TSHZ3Q63HK5 1081 aa20.48■□□□□ 0.87
ATXN2-219ENST00000550104 MX1P20591 662 aa20.48■□□□□ 0.87
ATXN2-219ENST00000550104 SYTL4Q96C24 671 aaPredicted RBP20.48■□□□□ 0.87
ATXN2-219ENST00000550104 C16orf71Q8IYS4 520 aaPredicted RBP20.47■□□□□ 0.87
ATXN2-219ENST00000550104 VSIG10Q8N0Z9 540 aa20.47■□□□□ 0.87
ATXN2-219ENST00000550104 INO80Q9ULG1 1556 aaPredicted RBP20.46■□□□□ 0.87
ATXN2-219ENST00000550104 ARHGAP31Q2M1Z3 1444 aa20.46■□□□□ 0.87
ATXN2-219ENST00000550104 CEP152O94986 1710 aa20.46■□□□□ 0.87
ATXN2-219ENST00000550104 ANKRD44Q8N8A2 993 aa20.46■□□□□ 0.87
ATXN2-219ENST00000550104 NEUROD6Q96NK8 337 aa20.46■□□□□ 0.87
ATXN2-219ENST00000550104 TSPOAP1O95153 1857 aa20.46■□□□□ 0.87
ATXN2-219ENST00000550104 STRN4Q9NRL3 753 aa20.46■□□□□ 0.87
ATXN2-219ENST00000550104 ADGRB3O60242 1522 aa20.45■□□□□ 0.86
ATXN2-219ENST00000550104 SPG7Q9UQ90 795 aa20.45■□□□□ 0.86
ATXN2-219ENST00000550104 LAMC1P11047 1609 aa20.45■□□□□ 0.86
ATXN2-219ENST00000550104 FSD1Q9BTV5 496 aa20.45■□□□□ 0.86
ATXN2-219ENST00000550104 PPRC1Q5VV67 1664 aaKnown RBP20.45■□□□□ 0.86
ATXN2-219ENST00000550104 CABP4P57796 275 aa20.44■□□□□ 0.86
ATXN2-219ENST00000550104 AMOTQ4VCS5 1084 aa20.44■□□□□ 0.86
ATXN2-219ENST00000550104 TTC22Q5TAA0 569 aa20.44■□□□□ 0.86
ATXN2-219ENST00000550104 SMC3Q9UQE7 1217 aa20.44■□□□□ 0.86
ATXN2-219ENST00000550104 DNAAF4Q8WXU2 420 aa20.43■□□□□ 0.86
ATXN2-219ENST00000550104 TOM1L2Q6ZVM7 507 aa20.43■□□□□ 0.86
ATXN2-219ENST00000550104 KRT28Q7Z3Y7 464 aa20.43■□□□□ 0.86
ATXN2-219ENST00000550104 DDX54Q8TDD1 881 aaKnown RBP20.42■□□□□ 0.86
ATXN2-219ENST00000550104 LRRC59Q96AG4 307 aaKnown RBP20.42■□□□□ 0.86
ATXN2-219ENST00000550104 PRDM11Q9NQV5 511 aa20.42■□□□□ 0.86
ATXN2-219ENST00000550104 PI4KAP2A4QPH2 592 aa20.42■□□□□ 0.86
ATXN2-219ENST00000550104 RNF20Q5VTR2 975 aa20.42■□□□□ 0.86
ATXN2-219ENST00000550104 PI4KAP1Q8N8J0 262 aa20.42■□□□□ 0.86
ATXN2-219ENST00000550104 PLEKHG3A1L390 1219 aa20.42■□□□□ 0.86
ATXN2-219ENST00000550104 VPS37CA5D8V6 355 aaPredicted RBP20.42■□□□□ 0.86
ATXN2-219ENST00000550104 ERC1Q8IUD2 1116 aa20.42■□□□□ 0.86
ATXN2-219ENST00000550104 CIZ1Q9ULV3 898 aaPredicted RBP20.41■□□□□ 0.86
ATXN2-219ENST00000550104 ATP6V1DQ9Y5K8 247 aa20.41■□□□□ 0.86
ATXN2-219ENST00000550104 HOXC9P31274 260 aa20.41■□□□□ 0.86
ATXN2-219ENST00000550104 CWC27Q6UX04 472 aaKnown RBP20.41■□□□□ 0.86
ATXN2-219ENST00000550104 G2E3Q7L622 706 aa20.41■□□□□ 0.86
ATXN2-219ENST00000550104 AACSQ86V21 672 aa20.41■□□□□ 0.86
ATXN2-219ENST00000550104 PRPF40AO75400 957 aaKnown RBP20.41■□□□□ 0.86
ATXN2-219ENST00000550104 CSPP1Q1MSJ5 1256 aa20.41■□□□□ 0.86
ATXN2-219ENST00000550104 CHL1O00533 1208 aa20.41■□□□□ 0.86
ATXN2-219ENST00000550104 CAVIN1Q6NZI2 390 aaKnown RBP20.41■□□□□ 0.86
ATXN2-219ENST00000550104 GLI2P10070 1586 aa20.4■□□□□ 0.86
ATXN2-219ENST00000550104 ANKRD24Q8TF21 1146 aa20.4■□□□□ 0.86
ATXN2-219ENST00000550104 LMTK2Q8IWU2 1503 aa20.4■□□□□ 0.86
ATXN2-219ENST00000550104 CEP85Q6P2H3 762 aa20.4■□□□□ 0.86
ATXN2-219ENST00000550104 KIF1BPQ96EK5 621 aa20.4■□□□□ 0.86
ATXN2-219ENST00000550104 DCTPP1Q9H773 170 aa20.4■□□□□ 0.86
ATXN2-219ENST00000550104 SDSP20132 328 aa20.4■□□□□ 0.86
ATXN2-219ENST00000550104 MCM2P49736 904 aa20.4■□□□□ 0.86
ATXN2-219ENST00000550104 MRE11P49959 708 aa20.4■□□□□ 0.86
ATXN2-219ENST00000550104 SIRT1Q96EB6 747 aa20.4■□□□□ 0.86
ATXN2-219ENST00000550104 UPF3BQ9BZI7 483 aaKnown RBP20.39■□□□□ 0.86
ATXN2-219ENST00000550104 PHF14O94880 888 aa20.39■□□□□ 0.85
ATXN2-219ENST00000550104 DNAJC2Q99543 621 aaKnown RBP20.39■□□□□ 0.85
ATXN2-219ENST00000550104 DBF4Q9UBU7 674 aaPredicted RBP20.39■□□□□ 0.85
ATXN2-219ENST00000550104 GNL2Q13823 731 aaKnown RBP20.38■□□□□ 0.85
ATXN2-219ENST00000550104 RBM42Q9BTD8 480 aaKnown RBP20.38■□□□□ 0.85
ATXN2-219ENST00000550104 DRC7Q8IY82 874 aa20.38■□□□□ 0.85
ATXN2-219ENST00000550104 PRR36Q9H6K5 1346 aa20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms