RNA–Protein interactions for RNA: ENST00000550064.5

CACNB3-213, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 5

Gene CACNB3, Length 746 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-213ENST00000550064 TOM1L2Q6ZVM7 507 aa15.77■□□□□ 0.12
CACNB3-213ENST00000550064 NUTM2AQ8IVF1 878 aaPredicted RBP15.77■□□□□ 0.12
CACNB3-213ENST00000550064 RAPGEF4Q8WZA2 1011 aa15.77■□□□□ 0.12
CACNB3-213ENST00000550064 RTF1Q92541 710 aaKnown RBP15.77■□□□□ 0.12
CACNB3-213ENST00000550064 STRN4Q9NRL3 753 aa15.77■□□□□ 0.12
CACNB3-213ENST00000550064 BTG4Q9NY30 223 aa15.77■□□□□ 0.12
CACNB3-213ENST00000550064 LAS1LQ9Y4W2 734 aaKnown RBP15.77■□□□□ 0.12
CACNB3-213ENST00000550064 MAP3K5Q99683 1374 aa15.76■□□□□ 0.11
CACNB3-213ENST00000550064 ADAMTS2O95450 1211 aa15.76■□□□□ 0.11
CACNB3-213ENST00000550064 NEFLP07196 543 aa15.76■□□□□ 0.11
CACNB3-213ENST00000550064 ZNF853P0CG23 659 aa15.76■□□□□ 0.11
CACNB3-213ENST00000550064 TATP17735 454 aaPredicted RBP15.76■□□□□ 0.11
CACNB3-213ENST00000550064 GNAI1P63096 354 aa15.76■□□□□ 0.11
CACNB3-213ENST00000550064 LARP1Q6PKG0 1096 aaKnown RBP15.76■□□□□ 0.11
CACNB3-213ENST00000550064 IFT57Q9NWB7 429 aa15.76■□□□□ 0.11
CACNB3-213ENST00000550064 JCADQ9P266 1359 aa15.75■□□□□ 0.11
CACNB3-213ENST00000550064 ZNF530Q6P9A1 599 aaPredicted RBP15.75■□□□□ 0.11
CACNB3-213ENST00000550064 CARD10Q9BWT7 1032 aa15.75■□□□□ 0.11
CACNB3-213ENST00000550064 CRB1P82279 1406 aa15.75■□□□□ 0.11
CACNB3-213ENST00000550064 MEGF6O75095 1541 aa15.74■□□□□ 0.11
CACNB3-213ENST00000550064 EXOSC9Q06265 439 aaKnown RBP15.74■□□□□ 0.11
CACNB3-213ENST00000550064 FKBP8Q14318 412 aa15.74■□□□□ 0.11
CACNB3-213ENST00000550064 CFAP44Q96MT7 982 aa15.74■□□□□ 0.11
CACNB3-213ENST00000550064 AKAP4Q5JQC9 854 aa15.73■□□□□ 0.11
CACNB3-213ENST00000550064 IL17REQ8NFR9 667 aa15.73■□□□□ 0.11
CACNB3-213ENST00000550064 HSPA1LP34931 641 aa15.72■□□□□ 0.11
CACNB3-213ENST00000550064 IRX6P78412 446 aaPredicted RBP15.72■□□□□ 0.11
CACNB3-213ENST00000550064 MBIPQ9NS73 344 aa15.72■□□□□ 0.11
CACNB3-213ENST00000550064 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.72■□□□□ 0.11
CACNB3-213ENST00000550064 PLCH1Q4KWH8 1693 aa15.72■□□□□ 0.11
CACNB3-213ENST00000550064 PLEKHG2Q9H7P9 1386 aa15.72■□□□□ 0.11
CACNB3-213ENST00000550064 CHL1O00533 1208 aa15.71■□□□□ 0.11
CACNB3-213ENST00000550064 RRP1P56182 461 aaKnown RBP15.71■□□□□ 0.11
CACNB3-213ENST00000550064 C1orf141Q5JVX7 400 aa15.71■□□□□ 0.11
CACNB3-213ENST00000550064 SPG7Q9UQ90 795 aa15.71■□□□□ 0.11
CACNB3-213ENST00000550064 LRRC37A3O60309 1634 aa15.71■□□□□ 0.11
CACNB3-213ENST00000550064 LGR6Q9HBX8 967 aa15.7■□□□□ 0.1
CACNB3-213ENST00000550064 OVOS2A0A0G2JMS6 1433 aa15.69■□□□□ 0.1
CACNB3-213ENST00000550064 PKD1L3Q7Z443 1732 aa15.69■□□□□ 0.1
CACNB3-213ENST00000550064 PARP4Q9UKK3 1724 aaKnown RBP15.69■□□□□ 0.1
CACNB3-213ENST00000550064 CT47B1P0C2W7 299 aaPredicted RBP15.69■□□□□ 0.1
CACNB3-213ENST00000550064 MPRIPQ6WCQ1 1025 aa15.69■□□□□ 0.1
CACNB3-213ENST00000550064 NRAPQ86VF7 1730 aa15.68■□□□□ 0.1
CACNB3-213ENST00000550064 VIRMAQ69YN4 1812 aaKnown RBP15.68■□□□□ 0.1
CACNB3-213ENST00000550064 CEMIPQ8WUJ3 1361 aa15.68■□□□□ 0.1
CACNB3-213ENST00000550064 RNMTO43148 476 aaKnown RBP15.68■□□□□ 0.1
CACNB3-213ENST00000550064 BCAR3O75815 825 aa15.68■□□□□ 0.1
CACNB3-213ENST00000550064 IL2RBP14784 551 aa15.68■□□□□ 0.1
CACNB3-213ENST00000550064 RARSP54136 660 aaKnown RBP15.68■□□□□ 0.1
CACNB3-213ENST00000550064 MIS18AQ9NYP9 233 aa15.68■□□□□ 0.1
CACNB3-213ENST00000550064 SPATA31A6Q5VVP1 1343 aa15.68■□□□□ 0.1
CACNB3-213ENST00000550064 PHKG2P15735 406 aa15.67■□□□□ 0.1
CACNB3-213ENST00000550064 TAF7Q15545 349 aaPredicted RBP15.67■□□□□ 0.1
CACNB3-213ENST00000550064 IFNL2Q8IZJ0 200 aa15.67■□□□□ 0.1
CACNB3-213ENST00000550064 USP35Q9P2H5 1018 aa15.67■□□□□ 0.1
CACNB3-213ENST00000550064 NWD2Q9ULI1 1742 aa15.66■□□□□ 0.1
CACNB3-213ENST00000550064 CYP27B1O15528 508 aa15.66■□□□□ 0.1
CACNB3-213ENST00000550064 PLIN1O60240 522 aa15.66■□□□□ 0.1
CACNB3-213ENST00000550064 C8orf58Q8NAV2 365 aa15.66■□□□□ 0.1
CACNB3-213ENST00000550064 ZCRB1Q8TBF4 217 aaKnown RBP15.66■□□□□ 0.1
CACNB3-213ENST00000550064 TSPYL4Q9UJ04 414 aa15.66■□□□□ 0.1
CACNB3-213ENST00000550064 SLIT2O94813 1529 aa15.66■□□□□ 0.1
CACNB3-213ENST00000550064 ADAMTS7Q9UKP4 1686 aa15.65■□□□□ 0.1
CACNB3-213ENST00000550064 TSPYL6Q8N831 410 aa15.65■□□□□ 0.1
CACNB3-213ENST00000550064 BABAM1Q9NWV8 329 aa15.65■□□□□ 0.1
CACNB3-213ENST00000550064 LRP6O75581 1613 aa15.65■□□□□ 0.1
CACNB3-213ENST00000550064 ELL2O00472 640 aaPredicted RBP15.64■□□□□ 0.09
CACNB3-213ENST00000550064 VAMP4O75379 141 aa15.64■□□□□ 0.09
CACNB3-213ENST00000550064 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.64■□□□□ 0.09
CACNB3-213ENST00000550064 NGLY1Q96IV0 654 aa15.64■□□□□ 0.09
CACNB3-213ENST00000550064 SCN11AQ9UI33 1791 aa15.64■□□□□ 0.09
CACNB3-213ENST00000550064 TEFQ10587 303 aa15.63■□□□□ 0.09
CACNB3-213ENST00000550064 TWISTNBQ3B726 338 aaPredicted RBP15.63■□□□□ 0.09
CACNB3-213ENST00000550064 C8orf37Q96NL8 207 aa15.63■□□□□ 0.09
CACNB3-213ENST00000550064 SHANK3Q9BYB0 1731 aa15.63■□□□□ 0.09
CACNB3-213ENST00000550064 DISP2A7MBM2 1401 aa15.62■□□□□ 0.09
CACNB3-213ENST00000550064 KDM6AO15550 1401 aaPredicted RBP15.62■□□□□ 0.09
CACNB3-213ENST00000550064 KRT24Q2M2I5 525 aa15.62■□□□□ 0.09
CACNB3-213ENST00000550064 ERICH6BQ5W0A0 696 aa15.62■□□□□ 0.09
CACNB3-213ENST00000550064 UNC5CLQ8IV45 518 aa15.62■□□□□ 0.09
CACNB3-213ENST00000550064 SSH1Q8WYL5 1049 aa15.62■□□□□ 0.09
CACNB3-213ENST00000550064 BCL2L13Q9BXK5 485 aa15.62■□□□□ 0.09
CACNB3-213ENST00000550064 SPATA31A1Q5TZJ5 1347 aa15.62■□□□□ 0.09
CACNB3-213ENST00000550064 PCDH11XQ9BZA7 1347 aa15.62■□□□□ 0.09
CACNB3-213ENST00000550064 PCDH11YQ9BZA8 1340 aa15.62■□□□□ 0.09
CACNB3-213ENST00000550064 SIPA1L3O60292 1781 aaPredicted RBP15.62■□□□□ 0.09
CACNB3-213ENST00000550064 HSP90AB1P08238 724 aaKnown RBP15.61■□□□□ 0.09
CACNB3-213ENST00000550064 ALDH1L2Q3SY69 923 aa15.61■□□□□ 0.09
CACNB3-213ENST00000550064 ZNF428Q96B54 188 aa15.61■□□□□ 0.09
CACNB3-213ENST00000550064 DCAF5Q96JK2 942 aa15.61■□□□□ 0.09
CACNB3-213ENST00000550064 SPATA31A5Q5VU36 1347 aa15.61■□□□□ 0.09
CACNB3-213ENST00000550064 SPATA31A7Q8IWB4 1347 aa15.61■□□□□ 0.09
CACNB3-213ENST00000550064 WNK3Q9BYP7 1800 aa15.61■□□□□ 0.09
CACNB3-213ENST00000550064 KDM3BQ7LBC6 1761 aa15.6■□□□□ 0.09
CACNB3-213ENST00000550064 C20orf194Q5TEA3 1177 aa15.6■□□□□ 0.09
CACNB3-213ENST00000550064 FNBP4Q8N3X1 1017 aaPredicted RBP15.6■□□□□ 0.09
CACNB3-213ENST00000550064 DDX54Q8TDD1 881 aaKnown RBP15.6■□□□□ 0.09
CACNB3-213ENST00000550064 SMC4Q9NTJ3 1288 aa15.6■□□□□ 0.09
CACNB3-213ENST00000550064 BCL9LQ86UU0 1499 aa15.59■□□□□ 0.09
CACNB3-213ENST00000550064 BTBD11A6QL63 1104 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms