RNA–Protein interactions for RNA: ENST00000549883.5

HDAC7-229, Transcript of histone deacetylase 7, humanhuman

TSL 3

Gene HDAC7, Length 537 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-229ENST00000549883 PROM2Q8N271 834 aa13.43□□□□□ -0.26
HDAC7-229ENST00000549883 DOT1LQ8TEK3 1739 aa13.43□□□□□ -0.26
HDAC7-229ENST00000549883 KNSTRNQ9Y448 316 aa13.43□□□□□ -0.26
HDAC7-229ENST00000549883 CNGB1Q14028 1251 aaPredicted RBP13.42□□□□□ -0.26
HDAC7-229ENST00000549883 EIF4A2Q14240 407 aaKnown RBP13.42□□□□□ -0.26
HDAC7-229ENST00000549883 MORC1Q86VD1 984 aa13.42□□□□□ -0.26
HDAC7-229ENST00000549883 ZCRB1Q8TBF4 217 aaKnown RBP13.42□□□□□ -0.26
HDAC7-229ENST00000549883 EYA1Q99502 592 aa13.42□□□□□ -0.26
HDAC7-229ENST00000549883 RGPD3A6NKT7 1758 aaPredicted RBP13.42□□□□□ -0.26
HDAC7-229ENST00000549883 RGPD4Q7Z3J3 1758 aa13.42□□□□□ -0.26
HDAC7-229ENST00000549883 NSD2O96028 1365 aa13.42□□□□□ -0.26
HDAC7-229ENST00000549883 NCAPD2Q15021 1401 aa13.41□□□□□ -0.26
HDAC7-229ENST00000549883 CC2D1BQ5T0F9 858 aaKnown RBP13.41□□□□□ -0.26
HDAC7-229ENST00000549883 PKD1L3Q7Z443 1732 aa13.4□□□□□ -0.26
HDAC7-229ENST00000549883 PLSCR1O15162 318 aa13.39□□□□□ -0.27
HDAC7-229ENST00000549883 RAPGEF4Q8WZA2 1011 aa13.39□□□□□ -0.27
HDAC7-229ENST00000549883 ANO8Q9HCE9 1232 aaPredicted RBP13.39□□□□□ -0.27
HDAC7-229ENST00000549883 PARD3Q8TEW0 1356 aa13.39□□□□□ -0.27
HDAC7-229ENST00000549883 TOGARAM1Q9Y4F4 1720 aa13.39□□□□□ -0.27
HDAC7-229ENST00000549883 TATP17735 454 aaPredicted RBP13.38□□□□□ -0.27
HDAC7-229ENST00000549883 CYP27B1O15528 508 aa13.37□□□□□ -0.27
HDAC7-229ENST00000549883 PRIM1P49642 420 aaKnown RBP13.37□□□□□ -0.27
HDAC7-229ENST00000549883 TXNRD1Q16881 649 aa13.37□□□□□ -0.27
HDAC7-229ENST00000549883 ITGB4P16144 1822 aa13.36□□□□□ -0.27
HDAC7-229ENST00000549883 AEBP1Q8IUX7 1158 aa13.36□□□□□ -0.27
HDAC7-229ENST00000549883 SYTL4Q96C24 671 aaPredicted RBP13.36□□□□□ -0.27
HDAC7-229ENST00000549883 SRCAPQ6ZRS2 3230 aa13.36□□□□□ -0.27
HDAC7-229ENST00000549883 MTHFSP49914 203 aa13.35□□□□□ -0.27
HDAC7-229ENST00000549883 KCNQ4P56696 695 aa13.35□□□□□ -0.27
HDAC7-229ENST00000549883 PDGFDQ9GZP0 370 aaPredicted RBP13.35□□□□□ -0.27
HDAC7-229ENST00000549883 IGSF1Q8N6C5 1336 aa13.35□□□□□ -0.27
HDAC7-229ENST00000549883 LRRC4BQ9NT99 713 aa13.34□□□□□ -0.27
HDAC7-229ENST00000549883 LY75O60449 1722 aa13.33□□□□□ -0.27
HDAC7-229ENST00000549883 PAPPAQ13219 1627 aa13.33□□□□□ -0.28
HDAC7-229ENST00000549883 IL13P35225 146 aa13.33□□□□□ -0.28
HDAC7-229ENST00000549883 PCDH11XQ9BZA7 1347 aa13.33□□□□□ -0.28
HDAC7-229ENST00000549883 PCDH11YQ9BZA8 1340 aa13.33□□□□□ -0.28
HDAC7-229ENST00000549883 LRP5O75197 1615 aa13.32□□□□□ -0.28
HDAC7-229ENST00000549883 NBPF14Q5TI25 921 aa13.32□□□□□ -0.28
HDAC7-229ENST00000549883 CASZ1Q86V15 1759 aa13.32□□□□□ -0.28
HDAC7-229ENST00000549883 NPC1L1Q9UHC9 1359 aa13.31□□□□□ -0.28
HDAC7-229ENST00000549883 TUBGCP6Q96RT7 1819 aa13.3□□□□□ -0.28
HDAC7-229ENST00000549883 ZNF827Q17R98 1081 aa13.3□□□□□ -0.28
HDAC7-229ENST00000549883 SPG7Q9UQ90 795 aa13.3□□□□□ -0.28
HDAC7-229ENST00000549883 COL3A1P02461 1466 aaPredicted RBP13.29□□□□□ -0.28
HDAC7-229ENST00000549883 PHKG2P15735 406 aa13.29□□□□□ -0.28
HDAC7-229ENST00000549883 NKX1-1Q15270 411 aaPredicted RBP13.29□□□□□ -0.28
HDAC7-229ENST00000549883 SULT6B1Q6IMI4 303 aa13.29□□□□□ -0.28
HDAC7-229ENST00000549883 MPRIPQ6WCQ1 1025 aa13.29□□□□□ -0.28
HDAC7-229ENST00000549883 HMOX1P09601 288 aa13.28□□□□□ -0.28
HDAC7-229ENST00000549883 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.28□□□□□ -0.28
HDAC7-229ENST00000549883 TAF1LQ8IZX4 1826 aa13.27□□□□□ -0.28
HDAC7-229ENST00000549883 SLC15A2Q16348 729 aa13.27□□□□□ -0.29
HDAC7-229ENST00000549883 PIGBQ92521 554 aa13.27□□□□□ -0.29
HDAC7-229ENST00000549883 KDRP35968 1356 aa13.27□□□□□ -0.29
HDAC7-229ENST00000549883 VIRMAQ69YN4 1812 aaKnown RBP13.26□□□□□ -0.29
HDAC7-229ENST00000549883 IFNL2Q8IZJ0 200 aa13.26□□□□□ -0.29
HDAC7-229ENST00000549883 STK32BQ9NY57 414 aa13.26□□□□□ -0.29
HDAC7-229ENST00000549883 KDM6AO15550 1401 aaPredicted RBP13.25□□□□□ -0.29
HDAC7-229ENST00000549883 DIAPH1O60610 1272 aaKnown RBP13.25□□□□□ -0.29
HDAC7-229ENST00000549883 ZBTB7AO95365 584 aa13.25□□□□□ -0.29
HDAC7-229ENST00000549883 ZNF530Q6P9A1 599 aaPredicted RBP13.25□□□□□ -0.29
HDAC7-229ENST00000549883 AKT1S1Q96B36 256 aa13.25□□□□□ -0.29
HDAC7-229ENST00000549883 C5P01031 1676 aa13.24□□□□□ -0.29
HDAC7-229ENST00000549883 PALLDQ8WX93 1383 aa13.24□□□□□ -0.29
HDAC7-229ENST00000549883 PPP2R1AP30153 589 aa13.24□□□□□ -0.29
HDAC7-229ENST00000549883 PLEKHO1Q53GL0 409 aaPredicted RBP13.24□□□□□ -0.29
HDAC7-229ENST00000549883 CCNL1Q9UK58 526 aaPredicted RBP13.24□□□□□ -0.29
HDAC7-229ENST00000549883 ASAP1Q9ULH1 1129 aa13.24□□□□□ -0.29
HDAC7-229ENST00000549883 SCN11AQ9UI33 1791 aa13.23□□□□□ -0.29
HDAC7-229ENST00000549883 SLC27A3Q5K4L6 730 aa13.23□□□□□ -0.29
HDAC7-229ENST00000549883 ATF5Q9Y2D1 282 aaPredicted RBP13.23□□□□□ -0.29
HDAC7-229ENST00000549883 QSER1Q2KHR3 1735 aa13.22□□□□□ -0.29
HDAC7-229ENST00000549883 SMIM5Q71RC9 77 aa13.22□□□□□ -0.29
HDAC7-229ENST00000549883 PNPLA7Q6ZV29 1317 aa13.21□□□□□ -0.29
HDAC7-229ENST00000549883 U2SURPO15042 1029 aaKnown RBP13.21□□□□□ -0.29
HDAC7-229ENST00000549883 DDX10Q13206 875 aaKnown RBP13.21□□□□□ -0.29
HDAC7-229ENST00000549883 AMOTQ4VCS5 1084 aa13.21□□□□□ -0.29
HDAC7-229ENST00000549883 AMIGO3Q86WK7 504 aa13.21□□□□□ -0.29
HDAC7-229ENST00000549883 SPON1Q9HCB6 807 aa13.21□□□□□ -0.29
HDAC7-229ENST00000549883 ATG3Q9NT62 314 aa13.21□□□□□ -0.29
HDAC7-229ENST00000549883 TMOD3Q9NYL9 352 aa13.21□□□□□ -0.29
HDAC7-229ENST00000549883 PLEKHG2Q9H7P9 1386 aa13.2□□□□□ -0.3
HDAC7-229ENST00000549883 PTGER2P43116 358 aa13.2□□□□□ -0.3
HDAC7-229ENST00000549883 MTHFSDQ2M296 383 aaKnown RBP13.2□□□□□ -0.3
HDAC7-229ENST00000549883 DCAF5Q96JK2 942 aa13.2□□□□□ -0.3
HDAC7-229ENST00000549883 LGR6Q9HBX8 967 aa13.2□□□□□ -0.3
HDAC7-229ENST00000549883 C4BP0C0L5 1744 aa13.19□□□□□ -0.3
HDAC7-229ENST00000549883 ITPK1Q13572 414 aa13.19□□□□□ -0.3
HDAC7-229ENST00000549883 C1orf141Q5JVX7 400 aa13.19□□□□□ -0.3
HDAC7-229ENST00000549883 SLC4A9Q96Q91 983 aa13.19□□□□□ -0.3
HDAC7-229ENST00000549883 UBR3Q6ZT12 1888 aa13.19□□□□□ -0.3
HDAC7-229ENST00000549883 LOC102724428A0A0B4J2F2 783 aa13.18□□□□□ -0.3
HDAC7-229ENST00000549883 ERVV-2B6SEH9 535 aa13.18□□□□□ -0.3
HDAC7-229ENST00000549883 SIK1P57059 783 aa13.18□□□□□ -0.3
HDAC7-229ENST00000549883 NFATC2IPQ8NCF5 419 aa13.18□□□□□ -0.3
HDAC7-229ENST00000549883 LINC00116Q8NCU8 138 aa13.18□□□□□ -0.3
HDAC7-229ENST00000549883 SMARCC1Q92922 1105 aaPredicted RBP13.18□□□□□ -0.3
HDAC7-229ENST00000549883 SGIP1Q9BQI5 828 aa13.18□□□□□ -0.3
HDAC7-229ENST00000549883 TFCP2L1Q9NZI6 479 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms