RNA–Protein interactions for RNA: ENST00000549686.5

LETMD1-220, Transcript of LETM1 domain containing 1, humanhuman

TSL 2

Gene LETMD1, Length 563 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-220ENST00000549686 GOLGA2Q08379 1002 aa22.79■■□□□ 1.24
LETMD1-220ENST00000549686 MTHFSDQ2M296 383 aaKnown RBP22.79■■□□□ 1.24
LETMD1-220ENST00000549686 UNC5CLQ8IV45 518 aa22.79■■□□□ 1.24
LETMD1-220ENST00000549686 TRIM35Q9UPQ4 493 aa22.78■■□□□ 1.24
LETMD1-220ENST00000549686 THRAP3Q9Y2W1 955 aaKnown RBP22.78■■□□□ 1.24
LETMD1-220ENST00000549686 RGPD2P0DJD1 1756 aa22.78■■□□□ 1.24
LETMD1-220ENST00000549686 SENP3-EIF4A1A0A087X0R7 540 aa22.77■■□□□ 1.24
LETMD1-220ENST00000549686 SPG7Q9UQ90 795 aa22.77■■□□□ 1.24
LETMD1-220ENST00000549686 IL16Q14005 1332 aa22.77■■□□□ 1.24
LETMD1-220ENST00000549686 IL2RBP14784 551 aa22.76■■□□□ 1.23
LETMD1-220ENST00000549686 CDCA7Q9BWT1 371 aaPredicted RBP22.76■■□□□ 1.23
LETMD1-220ENST00000549686 NRAPQ86VF7 1730 aa22.76■■□□□ 1.23
LETMD1-220ENST00000549686 OVOS2A0A0G2JMS6 1433 aa22.75■■□□□ 1.23
LETMD1-220ENST00000549686 GNAT3A8MTJ3 354 aa22.75■■□□□ 1.23
LETMD1-220ENST00000549686 E9PSI1 815 aa22.75■■□□□ 1.23
LETMD1-220ENST00000549686 RTF1Q92541 710 aaKnown RBP22.75■■□□□ 1.23
LETMD1-220ENST00000549686 MEGF6O75095 1541 aa22.74■■□□□ 1.23
LETMD1-220ENST00000549686 VPS72Q15906 364 aa22.74■■□□□ 1.23
LETMD1-220ENST00000549686 MAP3K5Q99683 1374 aa22.74■■□□□ 1.23
LETMD1-220ENST00000549686 AKAP4Q5JQC9 854 aa22.73■■□□□ 1.23
LETMD1-220ENST00000549686 C1orf141Q5JVX7 400 aa22.73■■□□□ 1.23
LETMD1-220ENST00000549686 ZNF530Q6P9A1 599 aaPredicted RBP22.73■■□□□ 1.23
LETMD1-220ENST00000549686 SPATA31A1Q5TZJ5 1347 aa22.73■■□□□ 1.23
LETMD1-220ENST00000549686 SPATA31A5Q5VU36 1347 aa22.73■■□□□ 1.23
LETMD1-220ENST00000549686 SPATA31A7Q8IWB4 1347 aa22.73■■□□□ 1.23
LETMD1-220ENST00000549686 BCL9LQ86UU0 1499 aa22.73■■□□□ 1.23
LETMD1-220ENST00000549686 USP21Q9UK80 565 aa22.72■■□□□ 1.23
LETMD1-220ENST00000549686 SLFN5Q08AF3 891 aa22.7■■□□□ 1.22
LETMD1-220ENST00000549686 ZCRB1Q8TBF4 217 aaKnown RBP22.7■■□□□ 1.22
LETMD1-220ENST00000549686 MYH16Q9H6N6 1097 aa22.7■■□□□ 1.22
LETMD1-220ENST00000549686 DISP2A7MBM2 1401 aa22.7■■□□□ 1.22
LETMD1-220ENST00000549686 PARP4Q9UKK3 1724 aaKnown RBP22.7■■□□□ 1.22
LETMD1-220ENST00000549686 BARGINQ6ZT62 677 aa22.69■■□□□ 1.22
LETMD1-220ENST00000549686 USP35Q9P2H5 1018 aa22.69■■□□□ 1.22
LETMD1-220ENST00000549686 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.68■■□□□ 1.22
LETMD1-220ENST00000549686 AFF2P51816 1311 aa22.68■■□□□ 1.22
LETMD1-220ENST00000549686 PCDH11XQ9BZA7 1347 aa22.68■■□□□ 1.22
LETMD1-220ENST00000549686 PCDH11YQ9BZA8 1340 aa22.68■■□□□ 1.22
LETMD1-220ENST00000549686 HSP90AB1P08238 724 aaKnown RBP22.68■■□□□ 1.22
LETMD1-220ENST00000549686 TRMT2AQ8IZ69 625 aaKnown RBP22.68■■□□□ 1.22
LETMD1-220ENST00000549686 IFNL2Q8IZJ0 200 aa22.68■■□□□ 1.22
LETMD1-220ENST00000549686 CCDC9Q9Y3X0 531 aaKnown RBP22.68■■□□□ 1.22
LETMD1-220ENST00000549686 CDCA7LQ96GN5 454 aa22.67■■□□□ 1.22
LETMD1-220ENST00000549686 IFT57Q9NWB7 429 aa22.67■■□□□ 1.22
LETMD1-220ENST00000549686 PKD1L3Q7Z443 1732 aa22.66■■□□□ 1.22
LETMD1-220ENST00000549686 GNAI1P63096 354 aa22.66■■□□□ 1.22
LETMD1-220ENST00000549686 PHKG2P15735 406 aa22.65■■□□□ 1.22
LETMD1-220ENST00000549686 TRPC5Q9UL62 973 aaPredicted RBP22.65■■□□□ 1.22
LETMD1-220ENST00000549686 DUSP27Q5VZP5 1158 aa22.64■■□□□ 1.21
LETMD1-220ENST00000549686 BABAM1Q9NWV8 329 aa22.64■■□□□ 1.21
LETMD1-220ENST00000549686 CEMIPQ8WUJ3 1361 aa22.63■■□□□ 1.21
LETMD1-220ENST00000549686 MCM10Q7L590 875 aa22.63■■□□□ 1.21
LETMD1-220ENST00000549686 CFAP44Q96MT7 982 aa22.63■■□□□ 1.21
LETMD1-220ENST00000549686 DLG5Q8TDM6 1919 aa22.63■■□□□ 1.21
LETMD1-220ENST00000549686 EXOC5O00471 708 aa22.62■■□□□ 1.21
LETMD1-220ENST00000549686 DCTN1Q14203 1278 aa22.62■■□□□ 1.21
LETMD1-220ENST00000549686 IL17REQ8NFR9 667 aa22.62■■□□□ 1.21
LETMD1-220ENST00000549686 DCAF5Q96JK2 942 aa22.62■■□□□ 1.21
LETMD1-220ENST00000549686 SPINK5Q9NQ38 1064 aaPredicted RBP22.62■■□□□ 1.21
LETMD1-220ENST00000549686 ATRNO75882 1429 aa22.62■■□□□ 1.21
LETMD1-220ENST00000549686 CYP27B1O15528 508 aa22.61■■□□□ 1.21
LETMD1-220ENST00000549686 RNMTO43148 476 aaKnown RBP22.61■■□□□ 1.21
LETMD1-220ENST00000549686 ZNF853P0CG23 659 aa22.61■■□□□ 1.21
LETMD1-220ENST00000549686 THUMPD2Q9BTF0 503 aaKnown RBP22.61■■□□□ 1.21
LETMD1-220ENST00000549686 TNS2Q63HR2 1409 aa22.6■■□□□ 1.21
LETMD1-220ENST00000549686 NKX1-1Q15270 411 aaPredicted RBP22.6■■□□□ 1.21
LETMD1-220ENST00000549686 ZNF772Q68DY9 489 aaPredicted RBP22.6■■□□□ 1.21
LETMD1-220ENST00000549686 GJD4Q96KN9 370 aaPredicted RBP22.59■■□□□ 1.21
LETMD1-220ENST00000549686 FANCIQ9NVI1 1328 aa22.58■■□□□ 1.21
LETMD1-220ENST00000549686 LRRC37A3O60309 1634 aa22.58■■□□□ 1.21
LETMD1-220ENST00000549686 CHL1O00533 1208 aa22.58■■□□□ 1.21
LETMD1-220ENST00000549686 TEFQ10587 303 aa22.58■■□□□ 1.21
LETMD1-220ENST00000549686 DDB1Q16531 1140 aa22.58■■□□□ 1.21
LETMD1-220ENST00000549686 MPRIPQ6WCQ1 1025 aa22.58■■□□□ 1.21
LETMD1-220ENST00000549686 WNK3Q9BYP7 1800 aa22.57■■□□□ 1.2
LETMD1-220ENST00000549686 CT47B1P0C2W7 299 aaPredicted RBP22.57■■□□□ 1.2
LETMD1-220ENST00000549686 TAF7Q15545 349 aaPredicted RBP22.57■■□□□ 1.2
LETMD1-220ENST00000549686 ADAMTS7Q9UKP4 1686 aa22.56■■□□□ 1.2
LETMD1-220ENST00000549686 DDX54Q8TDD1 881 aaKnown RBP22.56■■□□□ 1.2
LETMD1-220ENST00000549686 LAS1LQ9Y4W2 734 aaKnown RBP22.56■■□□□ 1.2
LETMD1-220ENST00000549686 QTRT2Q9H974 415 aaKnown RBP22.55■■□□□ 1.2
LETMD1-220ENST00000549686 LGR6Q9HBX8 967 aa22.55■■□□□ 1.2
LETMD1-220ENST00000549686 KDM6AO15550 1401 aaPredicted RBP22.55■■□□□ 1.2
LETMD1-220ENST00000549686 ERVV-2B6SEH9 535 aa22.54■■□□□ 1.2
LETMD1-220ENST00000549686 FAM98CQ17RN3 349 aaKnown RBP22.54■■□□□ 1.2
LETMD1-220ENST00000549686 MBIPQ9NS73 344 aa22.54■■□□□ 1.2
LETMD1-220ENST00000549686 ONECUT3O60422 494 aaPredicted RBP22.53■■□□□ 1.2
LETMD1-220ENST00000549686 TSPYL4Q9UJ04 414 aa22.53■■□□□ 1.2
LETMD1-220ENST00000549686 TSR2Q969E8 191 aaKnown RBP22.52■■□□□ 1.2
LETMD1-220ENST00000549686 SLC52A2Q9HAB3 445 aa22.52■■□□□ 1.2
LETMD1-220ENST00000549686 MRC1P22897 1456 aa22.52■■□□□ 1.2
LETMD1-220ENST00000549686 CABP4P57796 275 aa22.5■■□□□ 1.19
LETMD1-220ENST00000549686 ZNF428Q96B54 188 aa22.5■■□□□ 1.19
LETMD1-220ENST00000549686 RCAN3Q9UKA8 241 aa22.5■■□□□ 1.19
LETMD1-220ENST00000549686 SHANK3Q9BYB0 1731 aa22.5■■□□□ 1.19
LETMD1-220ENST00000549686 GLI3P10071 1580 aa22.5■■□□□ 1.19
LETMD1-220ENST00000549686 EXOSC9Q06265 439 aaKnown RBP22.49■■□□□ 1.19
LETMD1-220ENST00000549686 SOS1Q07889 1333 aaPredicted RBP22.49■■□□□ 1.19
LETMD1-220ENST00000549686 THSD7AQ9UPZ6 1657 aa22.49■■□□□ 1.19
LETMD1-220ENST00000549686 BTBD11A6QL63 1104 aa22.48■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms