RNA–Protein interactions for RNA: ENST00000549455.1

ATXN2-218, Transcript of ataxin 2, humanhuman

TSL 4

Gene ATXN2, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN2-218ENST00000549455 AKT1S1Q96B36 256 aa20.36■□□□□ 0.85
ATXN2-218ENST00000549455 PRIM1P49642 420 aaKnown RBP20.35■□□□□ 0.85
ATXN2-218ENST00000549455 KCNQ4P56696 695 aa20.35■□□□□ 0.85
ATXN2-218ENST00000549455 RRS1Q15050 365 aaKnown RBP20.35■□□□□ 0.85
ATXN2-218ENST00000549455 KLHL34Q8N239 644 aa20.35■□□□□ 0.85
ATXN2-218ENST00000549455 COL24A1Q17RW2 1714 aa20.35■□□□□ 0.85
ATXN2-218ENST00000549455 ZCRB1Q8TBF4 217 aaKnown RBP20.34■□□□□ 0.85
ATXN2-218ENST00000549455 GGNBP2Q9H3C7 697 aa20.34■□□□□ 0.85
ATXN2-218ENST00000549455 SMG6Q86US8 1419 aaKnown RBP20.34■□□□□ 0.85
ATXN2-218ENST00000549455 NSD2O96028 1365 aa20.34■□□□□ 0.85
ATXN2-218ENST00000549455 PNPLA7Q6ZV29 1317 aa20.33■□□□□ 0.85
ATXN2-218ENST00000549455 TMF1P82094 1093 aa20.33■□□□□ 0.85
ATXN2-218ENST00000549455 USHBP1Q8N6Y0 703 aa20.33■□□□□ 0.85
ATXN2-218ENST00000549455 USP47Q96K76 1375 aa20.33■□□□□ 0.84
ATXN2-218ENST00000549455 MAP3K5Q99683 1374 aa20.33■□□□□ 0.84
ATXN2-218ENST00000549455 TFCP2L1Q9NZI6 479 aa20.32■□□□□ 0.84
ATXN2-218ENST00000549455 FYB1O15117 783 aa20.31■□□□□ 0.84
ATXN2-218ENST00000549455 POLD1P28340 1107 aa20.31■□□□□ 0.84
ATXN2-218ENST00000549455 NBPF6Q5VWK0 638 aa20.31■□□□□ 0.84
ATXN2-218ENST00000549455 NBPF4Q96M43 638 aa20.31■□□□□ 0.84
ATXN2-218ENST00000549455 ZNF784Q8NCA9 323 aaPredicted RBP20.3■□□□□ 0.84
ATXN2-218ENST00000549455 SLC16A10Q8TF71 515 aa20.3■□□□□ 0.84
ATXN2-218ENST00000549455 UTRNP46939 3433 aa20.3■□□□□ 0.84
ATXN2-218ENST00000549455 C5P01031 1676 aa20.29■□□□□ 0.84
ATXN2-218ENST00000549455 RAPGEF4Q8WZA2 1011 aa20.29■□□□□ 0.84
ATXN2-218ENST00000549455 CCNL1Q9UK58 526 aaPredicted RBP20.29■□□□□ 0.84
ATXN2-218ENST00000549455 TATP17735 454 aaPredicted RBP20.27■□□□□ 0.84
ATXN2-218ENST00000549455 GPR162Q16538 588 aa20.27■□□□□ 0.84
ATXN2-218ENST00000549455 CGNL1Q0VF96 1302 aa20.27■□□□□ 0.83
ATXN2-218ENST00000549455 TAF1LQ8IZX4 1826 aa20.26■□□□□ 0.83
ATXN2-218ENST00000549455 MSH5O43196 834 aa20.26■□□□□ 0.83
ATXN2-218ENST00000549455 PELP1Q8IZL8 1130 aaKnown RBP20.26■□□□□ 0.83
ATXN2-218ENST00000549455 ITGB4P16144 1822 aa20.25■□□□□ 0.83
ATXN2-218ENST00000549455 INSRP06213 1382 aa20.25■□□□□ 0.83
ATXN2-218ENST00000549455 FLT4P35916 1363 aa20.25■□□□□ 0.83
ATXN2-218ENST00000549455 HSP90AB2PQ58FF8 381 aa20.25■□□□□ 0.83
ATXN2-218ENST00000549455 TOGARAM1Q9Y4F4 1720 aa20.24■□□□□ 0.83
ATXN2-218ENST00000549455 CDCA8Q53HL2 280 aa20.24■□□□□ 0.83
ATXN2-218ENST00000549455 PCDH11XQ9BZA7 1347 aa20.24■□□□□ 0.83
ATXN2-218ENST00000549455 PCDH11YQ9BZA8 1340 aa20.24■□□□□ 0.83
ATXN2-218ENST00000549455 PKD1L3Q7Z443 1732 aa20.23■□□□□ 0.83
ATXN2-218ENST00000549455 NSD3Q9BZ95 1437 aa20.22■□□□□ 0.83
ATXN2-218ENST00000549455 NLGN2Q8NFZ4 835 aa20.21■□□□□ 0.83
ATXN2-218ENST00000549455 ANKRD26Q9UPS8 1709 aa20.21■□□□□ 0.83
ATXN2-218ENST00000549455 KIF24Q5T7B8 1368 aa20.21■□□□□ 0.83
ATXN2-218ENST00000549455 MAP2P11137 1827 aaKnown RBP20.2■□□□□ 0.82
ATXN2-218ENST00000549455 COL23A1Q86Y22 540 aaPredicted RBP20.2■□□□□ 0.82
ATXN2-218ENST00000549455 TRIM26Q12899 539 aaPredicted RBP20.19■□□□□ 0.82
ATXN2-218ENST00000549455 MSL1Q68DK7 614 aa20.19■□□□□ 0.82
ATXN2-218ENST00000549455 MPRIPQ6WCQ1 1025 aa20.19■□□□□ 0.82
ATXN2-218ENST00000549455 EMILIN1Q9Y6C2 1016 aa20.19■□□□□ 0.82
ATXN2-218ENST00000549455 PALLDQ8WX93 1383 aa20.19■□□□□ 0.82
ATXN2-218ENST00000549455 CARD14Q9BXL6 1004 aa20.18■□□□□ 0.82
ATXN2-218ENST00000549455 C4BP0C0L5 1744 aa20.18■□□□□ 0.82
ATXN2-218ENST00000549455 PPM1GO15355 546 aaPredicted RBP20.17■□□□□ 0.82
ATXN2-218ENST00000549455 CYP27B1O15528 508 aa20.16■□□□□ 0.82
ATXN2-218ENST00000549455 UBR3Q6ZT12 1888 aa20.15■□□□□ 0.82
ATXN2-218ENST00000549455 NCAPD2Q15021 1401 aa20.12■□□□□ 0.81
ATXN2-218ENST00000549455 SENP3-EIF4A1A0A087X0R7 540 aa20.12■□□□□ 0.81
ATXN2-218ENST00000549455 SMARCC1Q92922 1105 aaPredicted RBP20.12■□□□□ 0.81
ATXN2-218ENST00000549455 AK7Q96M32 723 aa20.12■□□□□ 0.81
ATXN2-218ENST00000549455 GOLGB1Q14789 3259 aaKnown RBP20.11■□□□□ 0.81
ATXN2-218ENST00000549455 YBX3P16989 372 aaKnown RBP eCLIP20.11■□□□□ 0.81
ATXN2-218ENST00000549455 HMGB2P26583 209 aaKnown RBP20.11■□□□□ 0.81
ATXN2-218ENST00000549455 C1QTNF8P60827 252 aa20.11■□□□□ 0.81
ATXN2-218ENST00000549455 FLAD1Q8NFF5 587 aa20.11■□□□□ 0.81
ATXN2-218ENST00000549455 POLR3GLQ9BT43 218 aa20.11■□□□□ 0.81
ATXN2-218ENST00000549455 SPG7Q9UQ90 795 aa20.11■□□□□ 0.81
ATXN2-218ENST00000549455 PHF14O94880 888 aa20.09■□□□□ 0.81
ATXN2-218ENST00000549455 PIGBQ92521 554 aa20.09■□□□□ 0.81
ATXN2-218ENST00000549455 WASHC2AQ641Q2 1341 aa20.08■□□□□ 0.81
ATXN2-218ENST00000549455 GRIN3BO60391 1043 aa20.08■□□□□ 0.81
ATXN2-218ENST00000549455 GIGYF1O75420 1035 aaPredicted RBP20.08■□□□□ 0.81
ATXN2-218ENST00000549455 EYA1Q99502 592 aa20.07■□□□□ 0.8
ATXN2-218ENST00000549455 NKX1-1Q15270 411 aaPredicted RBP20.06■□□□□ 0.8
ATXN2-218ENST00000549455 SMIM5Q71RC9 77 aa20.06■□□□□ 0.8
ATXN2-218ENST00000549455 AMIGO3Q86WK7 504 aa20.06■□□□□ 0.8
ATXN2-218ENST00000549455 TMOD3Q9NYL9 352 aa20.06■□□□□ 0.8
ATXN2-218ENST00000549455 TNNT2P45379 298 aaPredicted RBP20.05■□□□□ 0.8
ATXN2-218ENST00000549455 CD2APQ9Y5K6 639 aa20.05■□□□□ 0.8
ATXN2-218ENST00000549455 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.04■□□□□ 0.8
ATXN2-218ENST00000549455 LOC102724428A0A0B4J2F2 783 aa20.04■□□□□ 0.8
ATXN2-218ENST00000549455 SIK1P57059 783 aa20.04■□□□□ 0.8
ATXN2-218ENST00000549455 POLKQ9UBT6 870 aa20.04■□□□□ 0.8
ATXN2-218ENST00000549455 TIMELESSQ9UNS1 1208 aa20.04■□□□□ 0.8
ATXN2-218ENST00000549455 IFNL2Q8IZJ0 200 aa20.03■□□□□ 0.8
ATXN2-218ENST00000549455 LINC00116Q8NCU8 138 aa20.03■□□□□ 0.8
ATXN2-218ENST00000549455 PHKG2P15735 406 aa20.02■□□□□ 0.8
ATXN2-218ENST00000549455 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.02■□□□□ 0.83e-7■■■□□ 17.3
ATXN2-218ENST00000549455 ASAP1Q9ULH1 1129 aa20.02■□□□□ 0.8
ATXN2-218ENST00000549455 SSFA2P28290 1259 aa20.01■□□□□ 0.79
ATXN2-218ENST00000549455 EIF4A2Q14240 407 aaKnown RBP20.01■□□□□ 0.79
ATXN2-218ENST00000549455 PCGF6Q9BYE7 350 aa20.01■□□□□ 0.79
ATXN2-218ENST00000549455 WWC3Q9ULE0 1092 aa20.01■□□□□ 0.79
ATXN2-218ENST00000549455 ATP10DQ9P241 1426 aa20.01■□□□□ 0.79
ATXN2-218ENST00000549455 GNPATO15228 680 aa20■□□□□ 0.79
ATXN2-218ENST00000549455 ATP6V1AP38606 617 aa20■□□□□ 0.79
ATXN2-218ENST00000549455 ITPK1Q13572 414 aa19.99■□□□□ 0.79
ATXN2-218ENST00000549455 IFFO2Q5TF58 517 aa19.99■□□□□ 0.79
ATXN2-218ENST00000549455 IGSF1Q8N6C5 1336 aa19.99■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms