RNA–Protein interactions for RNA: ENST00000549417.5

LIN7A-202, Transcript of lin-7 homolog A, crumbs cell polarity complex component, humanhuman

TSL 1 (best)

Gene LIN7A, Length 905 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7A-202ENST00000549417 SYTL4Q96C24 671 aaPredicted RBP10.05□□□□□ -0.8
LIN7A-202ENST00000549417 PIK3C2AO00443 1686 aa10.04□□□□□ -0.8
LIN7A-202ENST00000549417 SRPK2P78362 688 aaKnown RBP10.04□□□□□ -0.8
LIN7A-202ENST00000549417 HSPA1AP0DMV8 641 aaKnown RBP10.03□□□□□ -0.8
LIN7A-202ENST00000549417 HSPA1BP0DMV9 641 aaKnown RBP10.03□□□□□ -0.8
LIN7A-202ENST00000549417 DDX54Q8TDD1 881 aaKnown RBP10.03□□□□□ -0.8
LIN7A-202ENST00000549417 DCAF11Q8TEB1 546 aa10.03□□□□□ -0.8
LIN7A-202ENST00000549417 CABP2Q9NPB3 220 aa10.03□□□□□ -0.8
LIN7A-202ENST00000549417 NLRP2Q9NX02 1062 aa10.03□□□□□ -0.8
LIN7A-202ENST00000549417 CCNL1Q9UK58 526 aaPredicted RBP10.03□□□□□ -0.8
LIN7A-202ENST00000549417 IL2RBP14784 551 aa10.02□□□□□ -0.81
LIN7A-202ENST00000549417 C16orf71Q8IYS4 520 aaPredicted RBP10.02□□□□□ -0.81
LIN7A-202ENST00000549417 PRIM1P49642 420 aaKnown RBP10.01□□□□□ -0.81
LIN7A-202ENST00000549417 RBM46Q8TBY0 533 aaKnown RBP10.01□□□□□ -0.81
LIN7A-202ENST00000549417 CABP1Q9NZU7 370 aa10.01□□□□□ -0.81
LIN7A-202ENST00000549417 LY75O60449 1722 aa10□□□□□ -0.81
LIN7A-202ENST00000549417 SLC4A2P04920 1241 aa10□□□□□ -0.81
LIN7A-202ENST00000549417 SMIM5Q71RC9 77 aa9.99□□□□□ -0.81
LIN7A-202ENST00000549417 KCNH5Q8NCM2 988 aa9.99□□□□□ -0.81
LIN7A-202ENST00000549417 DOT1LQ8TEK3 1739 aa9.99□□□□□ -0.81
LIN7A-202ENST00000549417 ARHGAP27Q6ZUM4 889 aa9.98□□□□□ -0.81
LIN7A-202ENST00000549417 PCDH10Q9P2E7 1040 aa9.98□□□□□ -0.81
LIN7A-202ENST00000549417 NSD2O96028 1365 aa9.98□□□□□ -0.81
LIN7A-202ENST00000549417 NFAT5O94916 1531 aa9.97□□□□□ -0.81
LIN7A-202ENST00000549417 CICQ96RK0 1608 aaPredicted RBP9.97□□□□□ -0.81
LIN7A-202ENST00000549417 QRICH2Q9H0J4 1663 aa9.97□□□□□ -0.81
LIN7A-202ENST00000549417 FSTL1Q12841 308 aa9.97□□□□□ -0.81
LIN7A-202ENST00000549417 ERBB3P21860 1342 aa9.97□□□□□ -0.81
LIN7A-202ENST00000549417 PHF14O94880 888 aa9.96□□□□□ -0.82
LIN7A-202ENST00000549417 FAM161AQ3B820 660 aa9.96□□□□□ -0.82
LIN7A-202ENST00000549417 AMIGO3Q86WK7 504 aa9.96□□□□□ -0.82
LIN7A-202ENST00000549417 ANKRD24Q8TF21 1146 aa9.96□□□□□ -0.82
LIN7A-202ENST00000549417 RRAGCQ9HB90 399 aa9.96□□□□□ -0.82
LIN7A-202ENST00000549417 BCS1LQ9Y276 419 aa9.96□□□□□ -0.82
LIN7A-202ENST00000549417 TTC21BQ7Z4L5 1316 aa9.96□□□□□ -0.82
LIN7A-202ENST00000549417 C5P01031 1676 aa9.96□□□□□ -0.82
LIN7A-202ENST00000549417 ANKRD36BQ8N2N9 1353 aa9.95□□□□□ -0.82
LIN7A-202ENST00000549417 KCPQ6ZWJ8 1503 aa9.95□□□□□ -0.82
LIN7A-202ENST00000549417 N4BP2Q86UW6 1770 aaPredicted RBP9.95□□□□□ -0.82
LIN7A-202ENST00000549417 USP54Q70EL1 1684 aa9.94□□□□□ -0.82
LIN7A-202ENST00000549417 USP47Q96K76 1375 aa9.94□□□□□ -0.82
LIN7A-202ENST00000549417 C9orf131Q5VYM1 1079 aa9.94□□□□□ -0.82
LIN7A-202ENST00000549417 LTN1O94822 1766 aa9.93□□□□□ -0.82
LIN7A-202ENST00000549417 A0A0G2JLW4 131 aa9.93□□□□□ -0.82
LIN7A-202ENST00000549417 LTV1Q96GA3 475 aaPredicted RBP9.93□□□□□ -0.82
LIN7A-202ENST00000549417 TAF1LQ8IZX4 1826 aa9.92□□□□□ -0.82
LIN7A-202ENST00000549417 NBPF1Q3BBV0 1214 aa9.92□□□□□ -0.82
LIN7A-202ENST00000549417 FLAD1Q8NFF5 587 aa9.92□□□□□ -0.82
LIN7A-202ENST00000549417 AK7Q96M32 723 aa9.92□□□□□ -0.82
LIN7A-202ENST00000549417 SPINK5Q9NQ38 1064 aaPredicted RBP9.92□□□□□ -0.82
LIN7A-202ENST00000549417 PXDNLA1KZ92 1463 aa9.91□□□□□ -0.82
LIN7A-202ENST00000549417 TOGARAM1Q9Y4F4 1720 aa9.91□□□□□ -0.82
LIN7A-202ENST00000549417 CENPJQ9HC77 1338 aaPredicted RBP9.91□□□□□ -0.82
LIN7A-202ENST00000549417 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.91□□□□□ -0.82
LIN7A-202ENST00000549417 SMC1BQ8NDV3 1235 aa9.91□□□□□ -0.82
LIN7A-202ENST00000549417 PKD1L3Q7Z443 1732 aa9.9□□□□□ -0.82
LIN7A-202ENST00000549417 KIAA1551Q9HCM1 1747 aa9.9□□□□□ -0.82
LIN7A-202ENST00000549417 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.9□□□□□ -0.82
LIN7A-202ENST00000549417 FCHSD2O94868 740 aa9.9□□□□□ -0.82
LIN7A-202ENST00000549417 C4BP0C0L5 1744 aa9.9□□□□□ -0.83
LIN7A-202ENST00000549417 UBR3Q6ZT12 1888 aa9.89□□□□□ -0.83
LIN7A-202ENST00000549417 TTC21AQ8NDW8 1320 aa9.89□□□□□ -0.83
LIN7A-202ENST00000549417 KDM2BQ8NHM5 1336 aa9.89□□□□□ -0.83
LIN7A-202ENST00000549417 FOXN1O15353 648 aa9.89□□□□□ -0.83
LIN7A-202ENST00000549417 RNF181Q9P0P0 153 aa9.89□□□□□ -0.83
LIN7A-202ENST00000549417 KIAA1210Q9ULL0 1709 aa9.88□□□□□ -0.83
LIN7A-202ENST00000549417 TNRC6CQ9HCJ0 1690 aaKnown RBP9.88□□□□□ -0.83
LIN7A-202ENST00000549417 MMP10P09238 476 aa9.88□□□□□ -0.83
LIN7A-202ENST00000549417 DPEP1P16444 411 aa9.88□□□□□ -0.83
LIN7A-202ENST00000549417 NME9Q86XW9 330 aa9.88□□□□□ -0.83
LIN7A-202ENST00000549417 ZCRB1Q8TBF4 217 aaKnown RBP9.88□□□□□ -0.83
LIN7A-202ENST00000549417 MKRN1Q9UHC7 482 aaKnown RBP9.88□□□□□ -0.83
LIN7A-202ENST00000549417 KTN1Q86UP2 1357 aaKnown RBP9.88□□□□□ -0.83
LIN7A-202ENST00000549417 PALLDQ8WX93 1383 aa9.88□□□□□ -0.83
LIN7A-202ENST00000549417 PLEKHG2Q9H7P9 1386 aa9.88□□□□□ -0.83
LIN7A-202ENST00000549417 SAMD1Q6SPF0 538 aaPredicted RBP9.87□□□□□ -0.83
LIN7A-202ENST00000549417 MPRIPQ6WCQ1 1025 aa9.87□□□□□ -0.83
LIN7A-202ENST00000549417 ZNF692Q9BU19 519 aaPredicted RBP9.87□□□□□ -0.83
LIN7A-202ENST00000549417 RGPD2P0DJD1 1756 aa9.87□□□□□ -0.83
LIN7A-202ENST00000549417 KIF13BQ9NQT8 1826 aa9.86□□□□□ -0.83
LIN7A-202ENST00000549417 DSG3P32926 999 aa9.86□□□□□ -0.83
LIN7A-202ENST00000549417 TGFB2P61812 414 aa9.86□□□□□ -0.83
LIN7A-202ENST00000549417 MEGF6O75095 1541 aa9.86□□□□□ -0.83
LIN7A-202ENST00000549417 C10orf71Q711Q0 1435 aa9.85□□□□□ -0.83
LIN7A-202ENST00000549417 ABHD8Q96I13 439 aa9.85□□□□□ -0.83
LIN7A-202ENST00000549417 STAC3Q96MF2 364 aa9.85□□□□□ -0.83
LIN7A-202ENST00000549417 BRCA1P38398 1863 aaKnown RBP9.85□□□□□ -0.83
LIN7A-202ENST00000549417 EVC2Q86UK5 1308 aa9.84□□□□□ -0.83
LIN7A-202ENST00000549417 SSFA2P28290 1259 aa9.84□□□□□ -0.83
LIN7A-202ENST00000549417 MLLT1Q03111 559 aaPredicted RBP9.84□□□□□ -0.83
LIN7A-202ENST00000549417 USHBP1Q8N6Y0 703 aa9.84□□□□□ -0.83
LIN7A-202ENST00000549417 LINC00116Q8NCU8 138 aa9.84□□□□□ -0.83
LIN7A-202ENST00000549417 PRDM10Q9NQV6 1147 aa9.84□□□□□ -0.83
LIN7A-202ENST00000549417 ZNF219Q9P2Y4 722 aaPredicted RBP9.84□□□□□ -0.83
LIN7A-202ENST00000549417 ARFGEF1Q9Y6D6 1849 aa9.84□□□□□ -0.83
LIN7A-202ENST00000549417 FAM208AQ9UK61 1670 aaKnown RBP9.83□□□□□ -0.84
LIN7A-202ENST00000549417 SBF1O95248 1867 aa9.83□□□□□ -0.84
LIN7A-202ENST00000549417 TNRC18O15417 2968 aaPredicted RBP9.83□□□□□ -0.84
LIN7A-202ENST00000549417 GNPATO15228 680 aa9.83□□□□□ -0.84
LIN7A-202ENST00000549417 MON2Q7Z3U7 1717 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms