RNA–Protein interactions for RNA: ENST00000549416.1

PRDM4-204, Transcript of PR/SET domain 4, humanhuman

TSL 2

Gene PRDM4, Length 568 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM4-204ENST00000549416 Q6ZVU0 165 aa9□□□□□ -0.97
PRDM4-204ENST00000549416 MKRN1Q9UHC7 482 aaKnown RBP9□□□□□ -0.97
PRDM4-204ENST00000549416 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.99□□□□□ -0.97
PRDM4-204ENST00000549416 SMCPP49901 116 aaPredicted RBP8.99□□□□□ -0.97
PRDM4-204ENST00000549416 KDF1Q8NAX2 398 aaPredicted RBP8.99□□□□□ -0.97
PRDM4-204ENST00000549416 NOD1Q9Y239 953 aa8.99□□□□□ -0.97
PRDM4-204ENST00000549416 MYCP01106 439 aaPredicted RBP8.98□□□□□ -0.97
PRDM4-204ENST00000549416 CRIPAKQ8N1N5 446 aa8.98□□□□□ -0.97
PRDM4-204ENST00000549416 MEIOBQ8N635 442 aa8.98□□□□□ -0.97
PRDM4-204ENST00000549416 SIRT1Q96EB6 747 aa8.98□□□□□ -0.97
PRDM4-204ENST00000549416 PCDHGA11Q9Y5H2 935 aa8.98□□□□□ -0.97
PRDM4-204ENST00000549416 ADH1AP07327 375 aa8.97□□□□□ -0.97
PRDM4-204ENST00000549416 CTC1Q2NKJ3 1217 aa8.97□□□□□ -0.97
PRDM4-204ENST00000549416 CDCA8Q53HL2 280 aa8.97□□□□□ -0.97
PRDM4-204ENST00000549416 AGBL1Q96MI9 1066 aa8.97□□□□□ -0.97
PRDM4-204ENST00000549416 AAASQ9NRG9 546 aa8.97□□□□□ -0.97
PRDM4-204ENST00000549416 ATP5J2-PTCD1G3V325 749 aa8.96□□□□□ -0.98
PRDM4-204ENST00000549416 LCE2BO14633 110 aa8.96□□□□□ -0.98
PRDM4-204ENST00000549416 ZBTB7BO15156 539 aaPredicted RBP8.96□□□□□ -0.98
PRDM4-204ENST00000549416 ST8SIA5O15466 376 aa8.96□□□□□ -0.98
PRDM4-204ENST00000549416 CLDN10P78369 228 aa8.96□□□□□ -0.98
PRDM4-204ENST00000549416 TRIM52Q96A61 297 aa8.96□□□□□ -0.98
PRDM4-204ENST00000549416 VRTNQ9H8Y1 702 aa8.96□□□□□ -0.98
PRDM4-204ENST00000549416 KIAA1024Q9UPX6 916 aa8.96□□□□□ -0.98
PRDM4-204ENST00000549416 AXIN1O15169 862 aa8.95□□□□□ -0.98
PRDM4-204ENST00000549416 STAU1O95793 577 aaKnown RBP8.95□□□□□ -0.98
PRDM4-204ENST00000549416 GTF2IP78347 998 aa8.95□□□□□ -0.98
PRDM4-204ENST00000549416 CRTC2Q53ET0 693 aaPredicted RBP8.95□□□□□ -0.98
PRDM4-204ENST00000549416 PBXIP1Q96AQ6 731 aa8.95□□□□□ -0.98
PRDM4-204ENST00000549416 DACH1Q9UI36 760 aa8.95□□□□□ -0.98
PRDM4-204ENST00000549416 CYP2U1Q7Z449 544 aa8.94□□□□□ -0.98
PRDM4-204ENST00000549416 TRIM46Q7Z4K8 759 aa8.94□□□□□ -0.98
PRDM4-204ENST00000549416 TRIM50Q86XT4 487 aa8.94□□□□□ -0.98
PRDM4-204ENST00000549416 OGFOD1Q8N543 542 aa8.94□□□□□ -0.98
PRDM4-204ENST00000549416 ESF1Q9H501 851 aaKnown RBP8.94□□□□□ -0.98
PRDM4-204ENST00000549416 DKK1O94907 266 aa8.93□□□□□ -0.98
PRDM4-204ENST00000549416 BMP1P13497 986 aa8.93□□□□□ -0.98
PRDM4-204ENST00000549416 PTGIRP43119 386 aa8.93□□□□□ -0.98
PRDM4-204ENST00000549416 RELBQ01201 579 aa8.93□□□□□ -0.98
PRDM4-204ENST00000549416 PTK7Q13308 1070 aa8.93□□□□□ -0.98
PRDM4-204ENST00000549416 FAM196BA6NMK8 535 aa8.92□□□□□ -0.98
PRDM4-204ENST00000549416 GNRH1P01148 92 aa8.92□□□□□ -0.98
PRDM4-204ENST00000549416 RASA1P20936 1047 aa8.92□□□□□ -0.98
PRDM4-204ENST00000549416 SCNN1DP51172 638 aa8.92□□□□□ -0.98
PRDM4-204ENST00000549416 MRPL14Q6P1L8 145 aaKnown RBP8.92□□□□□ -0.98
PRDM4-204ENST00000549416 Q6ZNB5 142 aa8.92□□□□□ -0.98
PRDM4-204ENST00000549416 LINC00528Q8N1L1 170 aa8.92□□□□□ -0.98
PRDM4-204ENST00000549416 ZNF395Q9H8N7 513 aaPredicted RBP8.92□□□□□ -0.98
PRDM4-204ENST00000549416 DNAAF2Q9NVR5 837 aaKnown RBP8.92□□□□□ -0.98
PRDM4-204ENST00000549416 A0A1W2PRU2 124 aa8.91□□□□□ -0.98
PRDM4-204ENST00000549416 USP17L15C9J2P7 530 aa8.91□□□□□ -0.98
PRDM4-204ENST00000549416 USP17L10C9JJH3 530 aa8.91□□□□□ -0.98
PRDM4-204ENST00000549416 USP17L13C9JLJ4 530 aa8.91□□□□□ -0.98
PRDM4-204ENST00000549416 USP17L12C9JPN9 530 aa8.91□□□□□ -0.98
PRDM4-204ENST00000549416 USP17L11C9JVI0 530 aa8.91□□□□□ -0.98
PRDM4-204ENST00000549416 USP17L21D6R901 530 aa8.91□□□□□ -0.98
PRDM4-204ENST00000549416 USP17L18D6R9N7 530 aa8.91□□□□□ -0.98
PRDM4-204ENST00000549416 USP17L22D6RA61 530 aa8.91□□□□□ -0.98
PRDM4-204ENST00000549416 USP17L17D6RBQ6 530 aa8.91□□□□□ -0.98
PRDM4-204ENST00000549416 USP17L19D6RCP7 530 aa8.91□□□□□ -0.98
PRDM4-204ENST00000549416 USP17L20D6RJB6 530 aa8.91□□□□□ -0.98
PRDM4-204ENST00000549416 ATP1A2P50993 1020 aa8.91□□□□□ -0.98
PRDM4-204ENST00000549416 USP17L24Q0WX57 530 aa8.91□□□□□ -0.98
PRDM4-204ENST00000549416 LARGE2Q8N3Y3 721 aa8.91□□□□□ -0.98
PRDM4-204ENST00000549416 ZNF594Q96JF6 807 aaPredicted RBP8.91□□□□□ -0.98
PRDM4-204ENST00000549416 TSEN34Q9BSV6 310 aaKnown RBP8.91□□□□□ -0.98
PRDM4-204ENST00000549416 ETNK1Q9HBU6 452 aa8.91□□□□□ -0.98
PRDM4-204ENST00000549416 ARHGEF10LQ9HCE6 1279 aa8.91□□□□□ -0.98
PRDM4-204ENST00000549416 RAB6BQ9NRW1 208 aa8.91□□□□□ -0.98
PRDM4-204ENST00000549416 TMEM229AB2RXF0 380 aa8.9□□□□□ -0.98
PRDM4-204ENST00000549416 PPP1R15AO75807 674 aaPredicted RBP8.9□□□□□ -0.98
PRDM4-204ENST00000549416 ATG7O95352 703 aa8.9□□□□□ -0.98
PRDM4-204ENST00000549416 CCDC102BQ68D86 513 aa8.9□□□□□ -0.98
PRDM4-204ENST00000549416 LARP1Q6PKG0 1096 aaKnown RBP8.9□□□□□ -0.98
PRDM4-204ENST00000549416 SIX5Q8N196 739 aa8.9□□□□□ -0.98
PRDM4-204ENST00000549416 SPINT1O43278 529 aa8.89□□□□□ -0.99
PRDM4-204ENST00000549416 IL2RAP01589 272 aa8.89□□□□□ -0.99
PRDM4-204ENST00000549416 GDF10P55107 478 aa8.89□□□□□ -0.99
PRDM4-204ENST00000549416 PSME1Q06323 249 aa8.89□□□□□ -0.99
PRDM4-204ENST00000549416 C6orf118Q5T5N4 469 aa8.89□□□□□ -0.99
PRDM4-204ENST00000549416 TPCN2Q8NHX9 752 aa8.89□□□□□ -0.99
PRDM4-204ENST00000549416 PURBQ96QR8 312 aaKnown RBP8.89□□□□□ -0.99
PRDM4-204ENST00000549416 ARXQ96QS3 562 aa8.89□□□□□ -0.99
PRDM4-204ENST00000549416 ATP13A2Q9NQ11 1180 aa8.89□□□□□ -0.99
PRDM4-204ENST00000549416 HRH3Q9Y5N1 445 aa8.89□□□□□ -0.99
PRDM4-204ENST00000549416 WASLO00401 505 aaPredicted RBP8.88□□□□□ -0.99
PRDM4-204ENST00000549416 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.88□□□□□ -0.99
PRDM4-204ENST00000549416 XAGE2Q96GT9 111 aa8.88□□□□□ -0.99
PRDM4-204ENST00000549416 ZFP42Q96MM3 310 aa8.88□□□□□ -0.99
PRDM4-204ENST00000549416 ZMIZ1Q9ULJ6 1067 aa8.88□□□□□ -0.99
PRDM4-204ENST00000549416 INHAP05111 366 aa8.87□□□□□ -0.99
PRDM4-204ENST00000549416 BMP2P12643 396 aa8.87□□□□□ -0.99
PRDM4-204ENST00000549416 DPYDQ12882 1025 aa8.87□□□□□ -0.99
PRDM4-204ENST00000549416 CLN3Q13286 438 aa8.87□□□□□ -0.99
PRDM4-204ENST00000549416 ELOAQ14241 798 aaKnown RBP8.87□□□□□ -0.99
PRDM4-204ENST00000549416 ANKMY2Q8IV38 441 aa8.87□□□□□ -0.99
PRDM4-204ENST00000549416 INSM2Q96T92 566 aaPredicted RBP8.87□□□□□ -0.99
PRDM4-204ENST00000549416 ZNF358Q9NW07 568 aa8.87□□□□□ -0.99
PRDM4-204ENST00000549416 SFI1A8K8P3 1242 aa8.86□□□□□ -0.99
PRDM4-204ENST00000549416 UPP2O95045 317 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms