RNA–Protein interactions for RNA: ENST00000549308.5

PTPRR-209, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRR, Length 1,603 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-209ENST00000549308 GNAI1P63096 354 aa15.68■□□□□ 0.1
PTPRR-209ENST00000549308 AMOTQ4VCS5 1084 aa15.68■□□□□ 0.1
PTPRR-209ENST00000549308 TOM1L2Q6ZVM7 507 aa15.68■□□□□ 0.1
PTPRR-209ENST00000549308 MCM10Q7L590 875 aa15.68■□□□□ 0.1
PTPRR-209ENST00000549308 RAPGEF4Q8WZA2 1011 aa15.68■□□□□ 0.1
PTPRR-209ENST00000549308 GNAT3A8MTJ3 354 aa15.68■□□□□ 0.1
PTPRR-209ENST00000549308 STRN4Q9NRL3 753 aa15.68■□□□□ 0.1
PTPRR-209ENST00000549308 IFT57Q9NWB7 429 aa15.68■□□□□ 0.1
PTPRR-209ENST00000549308 NUTM2BA6NNL0 878 aaPredicted RBP15.67■□□□□ 0.1
PTPRR-209ENST00000549308 NUTM2EB1AL46 878 aaPredicted RBP15.67■□□□□ 0.1
PTPRR-209ENST00000549308 IRX6P78412 446 aaPredicted RBP15.67■□□□□ 0.1
PTPRR-209ENST00000549308 ZNF530Q6P9A1 599 aaPredicted RBP15.67■□□□□ 0.1
PTPRR-209ENST00000549308 NUTM2AQ8IVF1 878 aaPredicted RBP15.67■□□□□ 0.1
PTPRR-209ENST00000549308 RNF123Q5XPI4 1314 aa15.67■□□□□ 0.1
PTPRR-209ENST00000549308 BTG4Q9NY30 223 aa15.66■□□□□ 0.1
PTPRR-209ENST00000549308 ADAMTS2O95450 1211 aa15.65■□□□□ 0.1
PTPRR-209ENST00000549308 RRP1P56182 461 aaKnown RBP15.65■□□□□ 0.1
PTPRR-209ENST00000549308 EXOSC9Q06265 439 aaKnown RBP15.65■□□□□ 0.1
PTPRR-209ENST00000549308 CFAP44Q96MT7 982 aa15.65■□□□□ 0.1
PTPRR-209ENST00000549308 JCADQ9P266 1359 aa15.65■□□□□ 0.1
PTPRR-209ENST00000549308 ZNF853P0CG23 659 aa15.65■□□□□ 0.1
PTPRR-209ENST00000549308 AKAP4Q5JQC9 854 aa15.65■□□□□ 0.1
PTPRR-209ENST00000549308 C1orf141Q5JVX7 400 aa15.65■□□□□ 0.1
PTPRR-209ENST00000549308 MEGF6O75095 1541 aa15.64■□□□□ 0.09
PTPRR-209ENST00000549308 LARP1Q6PKG0 1096 aaKnown RBP15.64■□□□□ 0.09
PTPRR-209ENST00000549308 CARD10Q9BWT7 1032 aa15.64■□□□□ 0.09
PTPRR-209ENST00000549308 CRB1P82279 1406 aa15.63■□□□□ 0.09
PTPRR-209ENST00000549308 LRRC37A3O60309 1634 aa15.63■□□□□ 0.09
PTPRR-209ENST00000549308 CT47B1P0C2W7 299 aaPredicted RBP15.63■□□□□ 0.09
PTPRR-209ENST00000549308 MBIPQ9NS73 344 aa15.63■□□□□ 0.09
PTPRR-209ENST00000549308 SPG7Q9UQ90 795 aa15.63■□□□□ 0.09
PTPRR-209ENST00000549308 PLCH1Q4KWH8 1693 aa15.62■□□□□ 0.09
PTPRR-209ENST00000549308 PARP4Q9UKK3 1724 aaKnown RBP15.62■□□□□ 0.09
PTPRR-209ENST00000549308 PLEKHG2Q9H7P9 1386 aa15.62■□□□□ 0.09
PTPRR-209ENST00000549308 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.61■□□□□ 0.09
PTPRR-209ENST00000549308 IL17REQ8NFR9 667 aa15.61■□□□□ 0.09
PTPRR-209ENST00000549308 CHL1O00533 1208 aa15.61■□□□□ 0.09
PTPRR-209ENST00000549308 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.61■□□□□ 0.09
PTPRR-209ENST00000549308 PKD1L3Q7Z443 1732 aa15.59■□□□□ 0.09
PTPRR-209ENST00000549308 OVOS2A0A0G2JMS6 1433 aa15.59■□□□□ 0.09
PTPRR-209ENST00000549308 PLIN1O60240 522 aa15.59■□□□□ 0.09
PTPRR-209ENST00000549308 BCAR3O75815 825 aa15.59■□□□□ 0.09
PTPRR-209ENST00000549308 IL2RBP14784 551 aa15.59■□□□□ 0.09
PTPRR-209ENST00000549308 RARSP54136 660 aaKnown RBP15.59■□□□□ 0.09
PTPRR-209ENST00000549308 MPRIPQ6WCQ1 1025 aa15.59■□□□□ 0.09
PTPRR-209ENST00000549308 TSPYL4Q9UJ04 414 aa15.59■□□□□ 0.09
PTPRR-209ENST00000549308 HSPA1LP34931 641 aa15.58■□□□□ 0.09
PTPRR-209ENST00000549308 LGR6Q9HBX8 967 aa15.58■□□□□ 0.09
PTPRR-209ENST00000549308 USP35Q9P2H5 1018 aa15.58■□□□□ 0.09
PTPRR-209ENST00000549308 NRAPQ86VF7 1730 aa15.58■□□□□ 0.08
PTPRR-209ENST00000549308 CEMIPQ8WUJ3 1361 aa15.58■□□□□ 0.08
PTPRR-209ENST00000549308 RNMTO43148 476 aaKnown RBP15.57■□□□□ 0.08
PTPRR-209ENST00000549308 TAF7Q15545 349 aaPredicted RBP15.57■□□□□ 0.08
PTPRR-209ENST00000549308 IFNL2Q8IZJ0 200 aa15.57■□□□□ 0.08
PTPRR-209ENST00000549308 VIRMAQ69YN4 1812 aaKnown RBP15.57■□□□□ 0.08
PTPRR-209ENST00000549308 SPATA31A6Q5VVP1 1343 aa15.57■□□□□ 0.08
PTPRR-209ENST00000549308 PHKG2P15735 406 aa15.57■□□□□ 0.08
PTPRR-209ENST00000549308 CANXP27824 592 aaKnown RBP15.57■□□□□ 0.08
PTPRR-209ENST00000549308 TEFQ10587 303 aa15.57■□□□□ 0.08
PTPRR-209ENST00000549308 ERICH6BQ5W0A0 696 aa15.57■□□□□ 0.08
PTPRR-209ENST00000549308 MIS18AQ9NYP9 233 aa15.57■□□□□ 0.08
PTPRR-209ENST00000549308 NWD2Q9ULI1 1742 aa15.56■□□□□ 0.08
PTPRR-209ENST00000549308 ZCRB1Q8TBF4 217 aaKnown RBP15.56■□□□□ 0.08
PTPRR-209ENST00000549308 ELL2O00472 640 aaPredicted RBP15.55■□□□□ 0.08
PTPRR-209ENST00000549308 TWISTNBQ3B726 338 aaPredicted RBP15.55■□□□□ 0.08
PTPRR-209ENST00000549308 TSPYL6Q8N831 410 aa15.55■□□□□ 0.08
PTPRR-209ENST00000549308 C8orf58Q8NAV2 365 aa15.55■□□□□ 0.08
PTPRR-209ENST00000549308 BCL2L13Q9BXK5 485 aa15.55■□□□□ 0.08
PTPRR-209ENST00000549308 BABAM1Q9NWV8 329 aa15.55■□□□□ 0.08
PTPRR-209ENST00000549308 PCDH11XQ9BZA7 1347 aa15.55■□□□□ 0.08
PTPRR-209ENST00000549308 PCDH11YQ9BZA8 1340 aa15.55■□□□□ 0.08
PTPRR-209ENST00000549308 HSP90AB1P08238 724 aaKnown RBP15.54■□□□□ 0.08
PTPRR-209ENST00000549308 ZNF428Q96B54 188 aa15.54■□□□□ 0.08
PTPRR-209ENST00000549308 SMC4Q9NTJ3 1288 aa15.54■□□□□ 0.08
PTPRR-209ENST00000549308 SLIT2O94813 1529 aa15.54■□□□□ 0.08
PTPRR-209ENST00000549308 VAMP4O75379 141 aa15.54■□□□□ 0.08
PTPRR-209ENST00000549308 FRAT1Q92837 279 aaPredicted RBP15.54■□□□□ 0.08
PTPRR-209ENST00000549308 C8orf37Q96NL8 207 aa15.54■□□□□ 0.08
PTPRR-209ENST00000549308 ADAMTS7Q9UKP4 1686 aa15.53■□□□□ 0.08
PTPRR-209ENST00000549308 CYP27B1O15528 508 aa15.53■□□□□ 0.08
PTPRR-209ENST00000549308 ALDH1L2Q3SY69 923 aa15.53■□□□□ 0.08
PTPRR-209ENST00000549308 SSH1Q8WYL5 1049 aa15.53■□□□□ 0.08
PTPRR-209ENST00000549308 NGLY1Q96IV0 654 aa15.53■□□□□ 0.08
PTPRR-209ENST00000549308 SCN11AQ9UI33 1791 aa15.53■□□□□ 0.08
PTPRR-209ENST00000549308 KDM6AO15550 1401 aaPredicted RBP15.52■□□□□ 0.08
PTPRR-209ENST00000549308 LRP6O75581 1613 aa15.52■□□□□ 0.08
PTPRR-209ENST00000549308 BTBD11A6QL63 1104 aa15.52■□□□□ 0.08
PTPRR-209ENST00000549308 CCDC9Q9Y3X0 531 aaKnown RBP15.52■□□□□ 0.08
PTPRR-209ENST00000549308 WNK3Q9BYP7 1800 aa15.52■□□□□ 0.07
PTPRR-209ENST00000549308 KRT24Q2M2I5 525 aa15.51■□□□□ 0.07
PTPRR-209ENST00000549308 MEX3CQ5U5Q3 659 aaKnown RBP15.51■□□□□ 0.07
PTPRR-209ENST00000549308 DCAF5Q96JK2 942 aa15.51■□□□□ 0.07
PTPRR-209ENST00000549308 KDM3BQ7LBC6 1761 aa15.51■□□□□ 0.07
PTPRR-209ENST00000549308 DISP2A7MBM2 1401 aa15.51■□□□□ 0.07
PTPRR-209ENST00000549308 SHANK3Q9BYB0 1731 aa15.51■□□□□ 0.07
PTPRR-209ENST00000549308 SIPA1L3O60292 1781 aaPredicted RBP15.5■□□□□ 0.07
PTPRR-209ENST00000549308 DDX54Q8TDD1 881 aaKnown RBP15.5■□□□□ 0.07
PTPRR-209ENST00000549308 SPATA31A1Q5TZJ5 1347 aa15.5■□□□□ 0.07
PTPRR-209ENST00000549308 C20orf194Q5TEA3 1177 aa15.5■□□□□ 0.07
PTPRR-209ENST00000549308 UNC5CLQ8IV45 518 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms